RNA–Protein interactions for RNA: ENST00000443780.5

UBE2D4-205, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-205ENST00000443780 KLKP1Q107X0 134 aa9.16□□□□□ -0.94
UBE2D4-205ENST00000443780 MT1BP07438 61 aa9.15□□□□□ -0.94
UBE2D4-205ENST00000443780 KRTAP19-8Q3LI54 63 aa9.14□□□□□ -0.95
UBE2D4-205ENST00000443780 Q5VV11 94 aa9.13□□□□□ -0.95
UBE2D4-205ENST00000443780 A0A1B0GV90 55 aa9.12□□□□□ -0.95
UBE2D4-205ENST00000443780 SYNE2Q8WXH0 6885 aaKnown RBP9.09□□□□□ -0.95
UBE2D4-205ENST00000443780 LINC00208Q96KT6 92 aa9.06□□□□□ -0.96
UBE2D4-205ENST00000443780 A6NN06 94 aa9.04□□□□□ -0.96
UBE2D4-205ENST00000443780 NDUFC1O43677 76 aa9.04□□□□□ -0.96
UBE2D4-205ENST00000443780 OCR1Q9BZK8 76 aa9.04□□□□□ -0.96
UBE2D4-205ENST00000443780 IMUPQ9GZP8 106 aa9.04□□□□□ -0.96
UBE2D4-205ENST00000443780 CRIPTQ9P021 101 aa9.03□□□□□ -0.96
UBE2D4-205ENST00000443780 A8MUN3 132 aa9.02□□□□□ -0.97
UBE2D4-205ENST00000443780 KRTAP6-3Q3LI67 103 aa9.02□□□□□ -0.97
UBE2D4-205ENST00000443780 MP68P56378 58 aa9□□□□□ -0.97
UBE2D4-205ENST00000443780 H0YAA0 97 aa8.98□□□□□ -0.97
UBE2D4-205ENST00000443780 KRTAP10-5P60370 271 aa8.94□□□□□ -0.98
UBE2D4-205ENST00000443780 J3QR89 54 aa8.93□□□□□ -0.98
UBE2D4-205ENST00000443780 H3BPC8 53 aa8.87□□□□□ -0.99
UBE2D4-205ENST00000443780 ADM2Q7Z4H4 148 aa8.87□□□□□ -0.99
UBE2D4-205ENST00000443780 SCGB1A1P11684 91 aa8.82□□□□□ -1
UBE2D4-205ENST00000443780 DMAC1Q96GE9 116 aa8.77□□□□□ -1.01
UBE2D4-205ENST00000443780 P0C880 135 aa8.68□□□□□ -1.02
UBE2D4-205ENST00000443780 C20orf197Q8N268 126 aa8.66□□□□□ -1.02
UBE2D4-205ENST00000443780 R4GN34 69 aa8.65□□□□□ -1.02
UBE2D4-205ENST00000443780 MT-ATP8P03928 68 aa8.64□□□□□ -1.03
UBE2D4-205ENST00000443780 KRTAP5-9P26371 169 aa8.61□□□□□ -1.03
UBE2D4-205ENST00000443780 PLAC4Q8WY50 150 aa8.61□□□□□ -1.03
UBE2D4-205ENST00000443780 TRAV7A0A075B6U4 112 aa8.59□□□□□ -1.03
UBE2D4-205ENST00000443780 PRO2289Q9P1D8 64 aa8.59□□□□□ -1.03
UBE2D4-205ENST00000443780 MUC12Q9UKN1 5478 aa8.58□□□□□ -1.04
UBE2D4-205ENST00000443780 K7ERU9 68 aa8.58□□□□□ -1.04
UBE2D4-205ENST00000443780 M0QZ58 72 aa8.58□□□□□ -1.04
UBE2D4-205ENST00000443780 MT1XP80297 61 aa8.58□□□□□ -1.04
UBE2D4-205ENST00000443780 SMIM20Q8N5G0 67 aa8.58□□□□□ -1.04
UBE2D4-205ENST00000443780 NEBP20929 6669 aa8.56□□□□□ -1.04
UBE2D4-205ENST00000443780 ACYP2P14621 99 aa8.55□□□□□ -1.04
UBE2D4-205ENST00000443780 LINC01554Q52M75 96 aa8.46□□□□□ -1.06
UBE2D4-205ENST00000443780 KMT2DO14686 5537 aa8.46□□□□□ -1.06
UBE2D4-205ENST00000443780 SPTSSBQ8NFR3 76 aa8.45□□□□□ -1.06
UBE2D4-205ENST00000443780 SNURFQ9Y675 71 aa8.41□□□□□ -1.06
UBE2D4-205ENST00000443780 CHKB-CPT1BH3BT56 60 aa8.38□□□□□ -1.07
UBE2D4-205ENST00000443780 KRTAP12-2P59991 146 aa8.37□□□□□ -1.07
UBE2D4-205ENST00000443780 KRTAP20-1Q3LI63 56 aa8.35□□□□□ -1.07
UBE2D4-205ENST00000443780 SPRR2FQ96RM1 72 aa8.34□□□□□ -1.07
UBE2D4-205ENST00000443780 MDN1Q9NU22 5596 aa8.34□□□□□ -1.07
UBE2D4-205ENST00000443780 KRTAP8-1Q8IUC2 63 aa8.31□□□□□ -1.08
UBE2D4-205ENST00000443780 SPANXA2-OT1Q8N9U9 137 aa8.31□□□□□ -1.08
UBE2D4-205ENST00000443780 SERP2Q8N6R1 65 aa8.28□□□□□ -1.08
UBE2D4-205ENST00000443780 KRTAP4-8A0A0G2JLE6 195 aa8.22□□□□□ -1.09
UBE2D4-205ENST00000443780 SPRR2EP22531 72 aa8.22□□□□□ -1.09
UBE2D4-205ENST00000443780 SPRR2BP35325 72 aa8.22□□□□□ -1.09
UBE2D4-205ENST00000443780 SPRR2AP35326 72 aa8.22□□□□□ -1.09
UBE2D4-205ENST00000443780 KRTAP4-8Q9BYQ9 185 aa8.22□□□□□ -1.09
UBE2D4-205ENST00000443780 KRTAP10-7P60409 375 aaPredicted RBP8.18□□□□□ -1.1
UBE2D4-205ENST00000443780 KRTAP10-12P60413 245 aa8.15□□□□□ -1.1
UBE2D4-205ENST00000443780 KRTAP2-3P0C7H8 128 aa8.14□□□□□ -1.11
UBE2D4-205ENST00000443780 KRTAP2-4Q9BYR9 128 aa8.14□□□□□ -1.11
UBE2D4-205ENST00000443780 LCE1AQ5T7P2 110 aa8.12□□□□□ -1.11
UBE2D4-205ENST00000443780 KRTAP13-4Q3LI77 160 aa8.1□□□□□ -1.11
UBE2D4-205ENST00000443780 COA5Q86WW8 74 aa8.07□□□□□ -1.12
UBE2D4-205ENST00000443780 COX7CP15954 63 aa8.01□□□□□ -1.13
UBE2D4-205ENST00000443780 CAMK2N1Q7Z7J9 78 aa7.95□□□□□ -1.14
UBE2D4-205ENST00000443780 SPRR2DP22532 72 aa7.94□□□□□ -1.14
UBE2D4-205ENST00000443780 SEC61GP60059 68 aa7.93□□□□□ -1.14
UBE2D4-205ENST00000443780 SERP1Q9Y6X1 66 aa7.93□□□□□ -1.14
UBE2D4-205ENST00000443780 H7BZZ5 65 aa7.91□□□□□ -1.14
UBE2D4-205ENST00000443780 CYSTM1Q9H1C7 97 aa7.9□□□□□ -1.14
UBE2D4-205ENST00000443780 KRTAP2-2Q9BYT5 123 aa7.88□□□□□ -1.15
UBE2D4-205ENST00000443780 KRTAP2-1Q9BYU5 128 aa7.88□□□□□ -1.15
UBE2D4-205ENST00000443780 A0A0D9SG42 100 aa7.84□□□□□ -1.15
UBE2D4-205ENST00000443780 SPATA8Q6RVD6 105 aa7.83□□□□□ -1.16
UBE2D4-205ENST00000443780 A0A1B0GU33 70 aa7.81□□□□□ -1.16
UBE2D4-205ENST00000443780 LCE3BQ5TA77 95 aa7.73□□□□□ -1.17
UBE2D4-205ENST00000443780 SPINT4Q6UDR6 99 aa7.73□□□□□ -1.17
UBE2D4-205ENST00000443780 KRTAP12-1P59990 96 aa7.7□□□□□ -1.18
UBE2D4-205ENST00000443780 ANAPC13Q9BS18 74 aa7.7□□□□□ -1.18
UBE2D4-205ENST00000443780 KRTAP19-7Q3SYF9 63 aa7.67□□□□□ -1.18
UBE2D4-205ENST00000443780 A0A1B0GU69 56 aa7.66□□□□□ -1.18
UBE2D4-205ENST00000443780 MT1EP04732 61 aa7.6□□□□□ -1.19
UBE2D4-205ENST00000443780 SMIM26A0A096LP01 95 aa7.59□□□□□ -1.19
UBE2D4-205ENST00000443780 CCDC179H3BU77 68 aa7.57□□□□□ -1.2
UBE2D4-205ENST00000443780 LCE5AQ5TCM9 118 aa7.56□□□□□ -1.2
UBE2D4-205ENST00000443780 A8MU10 97 aa7.53□□□□□ -1.2
UBE2D4-205ENST00000443780 KRTAP19-3Q7Z4W3 81 aa7.53□□□□□ -1.2
UBE2D4-205ENST00000443780 ATP5EP56381 51 aaPredicted RBP7.48□□□□□ -1.21
UBE2D4-205ENST00000443780 KRTAP19-5Q3LI72 72 aa7.47□□□□□ -1.21
UBE2D4-205ENST00000443780 PRR15LQ9BU68 103 aa7.42□□□□□ -1.22
UBE2D4-205ENST00000443780 MT1GP13640 62 aa7.37□□□□□ -1.23
UBE2D4-205ENST00000443780 C10orf95Q9H7T3 257 aa7.37□□□□□ -1.23
UBE2D4-205ENST00000443780 DSTQ03001 7570 aaKnown RBP7.36□□□□□ -1.23
UBE2D4-205ENST00000443780 LINC01558Q9Y6Z2 57 aa7.36□□□□□ -1.23
UBE2D4-205ENST00000443780 TNP1P09430 55 aa7.33□□□□□ -1.24
UBE2D4-205ENST00000443780 LCE3AQ5TA76 89 aa7.3□□□□□ -1.24
UBE2D4-205ENST00000443780 PP632Q6XCG6 107 aa7.29□□□□□ -1.24
UBE2D4-205ENST00000443780 TMEM258P61165 79 aa7.27□□□□□ -1.25
UBE2D4-205ENST00000443780 MT1LQ93083 61 aa7.26□□□□□ -1.25
UBE2D4-205ENST00000443780 MT1MQ8N339 61 aa7.24□□□□□ -1.25
UBE2D4-205ENST00000443780 KRTAP4-9Q9BYQ8 210 aa7.19□□□□□ -1.26
UBE2D4-205ENST00000443780 UQCR11O14957 56 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms