RNA–Protein interactions for RNA: ENST00000443047.6

CHFR-204, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 2,990 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-204ENST00000443047 C9orf92A6NGG3 77 aa8.14□□□□□ -1.11
CHFR-204ENST00000443047 C10orf95Q9H7T3 257 aa8.14□□□□□ -1.11
CHFR-204ENST00000443047 KRTAP10-4P60372 401 aaPredicted RBP8.13□□□□□ -1.11
CHFR-204ENST00000443047 RYR3Q15413 4870 aa8.13□□□□□ -1.11
CHFR-204ENST00000443047 KRTAP3-1Q9BYR8 98 aa8.12□□□□□ -1.11
CHFR-204ENST00000443047 TPRXLQ17RH7 258 aa8.11□□□□□ -1.11
CHFR-204ENST00000443047 PKHD1L1Q86WI1 4243 aa8.11□□□□□ -1.11
CHFR-204ENST00000443047 C20orf166-AS1Q96NR2 134 aa8.07□□□□□ -1.12
CHFR-204ENST00000443047 RPL37P61927 97 aaKnown RBP8.03□□□□□ -1.12
CHFR-204ENST00000443047 HSPG2P98160 4391 aa8.01□□□□□ -1.13
CHFR-204ENST00000443047 MYCBP2O75592 4640 aa7.99□□□□□ -1.13
CHFR-204ENST00000443047 KIAA1109Q2LD37 5005 aa7.97□□□□□ -1.13
CHFR-204ENST00000443047 RPS29P62273 56 aaKnown RBP7.96□□□□□ -1.14
CHFR-204ENST00000443047 KRTAP15-1Q3LI76 137 aa7.96□□□□□ -1.14
CHFR-204ENST00000443047 TNXBP22105 4242 aa7.95□□□□□ -1.14
CHFR-204ENST00000443047 FAT3Q8TDW7 4589 aa7.94□□□□□ -1.14
CHFR-204ENST00000443047 KRTAP13-4Q3LI77 160 aa7.94□□□□□ -1.14
CHFR-204ENST00000443047 KRTAP17-1Q9BYP8 105 aa7.94□□□□□ -1.14
CHFR-204ENST00000443047 RYR1P21817 5038 aa7.94□□□□□ -1.14
CHFR-204ENST00000443047 A0A0A0MQY5 61 aa7.89□□□□□ -1.15
CHFR-204ENST00000443047 Q5VSD8 79 aa7.89□□□□□ -1.15
CHFR-204ENST00000443047 EPPK1P58107 5090 aaKnown RBP7.86□□□□□ -1.15
CHFR-204ENST00000443047 KRTAP10-6P60371 365 aaPredicted RBP7.84□□□□□ -1.15
CHFR-204ENST00000443047 KRTAP10-8P60410 259 aa7.78□□□□□ -1.16
CHFR-204ENST00000443047 S4R3F8 94 aa7.77□□□□□ -1.17
CHFR-204ENST00000443047 KRTAP12-2P59991 146 aa7.74□□□□□ -1.17
CHFR-204ENST00000443047 KRTAP3-3Q9BYR6 98 aa7.72□□□□□ -1.17
CHFR-204ENST00000443047 KRTAP3-2Q9BYR7 98 aa7.72□□□□□ -1.17
CHFR-204ENST00000443047 LPAP08519 4548 aa7.68□□□□□ -1.18
CHFR-204ENST00000443047 ABCA13Q86UQ4 5058 aa7.66□□□□□ -1.18
CHFR-204ENST00000443047 LRP2P98164 4655 aa7.64□□□□□ -1.19
CHFR-204ENST00000443047 MT1HL1P0DM35 61 aa7.64□□□□□ -1.19
CHFR-204ENST00000443047 XP32Q5T750 250 aa7.64□□□□□ -1.19
CHFR-204ENST00000443047 LUZP6Q538Z0 58 aa7.62□□□□□ -1.19
CHFR-204ENST00000443047 LCE2DQ5TA82 110 aaPredicted RBP7.61□□□□□ -1.19
CHFR-204ENST00000443047 KRTAP12-1P59990 96 aa7.58□□□□□ -1.2
CHFR-204ENST00000443047 KRTAP4-5Q9BYR2 181 aa7.57□□□□□ -1.2
CHFR-204ENST00000443047 PLAC4Q8WY50 150 aa7.43□□□□□ -1.22
CHFR-204ENST00000443047 HERC2O95714 4834 aa7.37□□□□□ -1.23
CHFR-204ENST00000443047 M0QZ58 72 aa7.29□□□□□ -1.24
CHFR-204ENST00000443047 MUC2Q02817 5179 aa7.23□□□□□ -1.25
CHFR-204ENST00000443047 R4GN34 69 aa7.18□□□□□ -1.26
CHFR-204ENST00000443047 MUC17Q685J3 4493 aa7.17□□□□□ -1.26
CHFR-204ENST00000443047 KRTAP4-1Q9BYQ7 146 aa7.15□□□□□ -1.27
CHFR-204ENST00000443047 BIRC6Q9NR09 4857 aa7.14□□□□□ -1.27
CHFR-204ENST00000443047 HERC1Q15751 4861 aa7.13□□□□□ -1.27
CHFR-204ENST00000443047 PCLOQ9Y6V0 5065 aa7.09□□□□□ -1.27
CHFR-204ENST00000443047 SEC61BP60468 96 aaKnown RBP7.05□□□□□ -1.28
CHFR-204ENST00000443047 LORP23490 312 aaPredicted RBP6.99□□□□□ -1.29
CHFR-204ENST00000443047 CAMK2N1Q7Z7J9 78 aa6.95□□□□□ -1.3
CHFR-204ENST00000443047 HMCN2Q8NDA2 5059 aa6.91□□□□□ -1.3
CHFR-204ENST00000443047 KRTAP19-2Q3LHN2 52 aa6.89□□□□□ -1.31
CHFR-204ENST00000443047 PP632Q6XCG6 107 aa6.89□□□□□ -1.31
CHFR-204ENST00000443047 FAT4Q6V0I7 4981 aa6.88□□□□□ -1.31
CHFR-204ENST00000443047 LCE2CQ5TA81 110 aa6.87□□□□□ -1.31
CHFR-204ENST00000443047 LCE2BO14633 110 aa6.85□□□□□ -1.31
CHFR-204ENST00000443047 RNF213Q63HN8 5207 aa6.84□□□□□ -1.32
CHFR-204ENST00000443047 FLGP20930 4061 aaPredicted RBP6.8□□□□□ -1.32
CHFR-204ENST00000443047 UBR4Q5T4S7 5183 aa6.77□□□□□ -1.33
CHFR-204ENST00000443047 LCE2AQ5TA79 106 aaPredicted RBP6.73□□□□□ -1.33
CHFR-204ENST00000443047 TNP1P09430 55 aa6.63□□□□□ -1.35
CHFR-204ENST00000443047 SPRR5A0A1B0GTR4 108 aa6.57□□□□□ -1.36
CHFR-204ENST00000443047 PRO2289Q9P1D8 64 aa6.55□□□□□ -1.36
CHFR-204ENST00000443047 M0R2T5 61 aa6.49□□□□□ -1.37
CHFR-204ENST00000443047 MT1HP80294 61 aa6.41□□□□□ -1.38
CHFR-204ENST00000443047 KRTAP23-1A1A580 65 aa6.35□□□□□ -1.39
CHFR-204ENST00000443047 KRTAP19-1Q8IUB9 90 aa6.32□□□□□ -1.4
CHFR-204ENST00000443047 INE1O15225 51 aa6.3□□□□□ -1.4
CHFR-204ENST00000443047 MT1FP04733 61 aa6.3□□□□□ -1.4
CHFR-204ENST00000443047 KRTAP10-10P60014 251 aa6.28□□□□□ -1.4
CHFR-204ENST00000443047 MT2AP02795 61 aa6.27□□□□□ -1.41
CHFR-204ENST00000443047 SPRR2GQ9BYE4 73 aa6.24□□□□□ -1.41
CHFR-204ENST00000443047 LCE3AQ5TA76 89 aa6.24□□□□□ -1.41
CHFR-204ENST00000443047 KRTAP9-8Q9BYQ0 159 aa6.23□□□□□ -1.41
CHFR-204ENST00000443047 USH2AO75445 5202 aa6.04□□□□□ -1.44
CHFR-204ENST00000443047 MT1BP07438 61 aa6.01□□□□□ -1.45
CHFR-204ENST00000443047 KRTAP19-8Q3LI54 63 aa5.98□□□□□ -1.45
CHFR-204ENST00000443047 KRTAP9-3Q9BYQ3 159 aa5.96□□□□□ -1.46
CHFR-204ENST00000443047 KRTAP10-5P60370 271 aa5.93□□□□□ -1.46
CHFR-204ENST00000443047 MT1XP80297 61 aa5.93□□□□□ -1.46
CHFR-204ENST00000443047 KRTAP8-1Q8IUC2 63 aa5.91□□□□□ -1.46
CHFR-204ENST00000443047 KRTAP12-3P60328 96 aa5.88□□□□□ -1.47
CHFR-204ENST00000443047 KMT2DO14686 5537 aa5.84□□□□□ -1.47
CHFR-204ENST00000443047 KRTAP10-7P60409 375 aaPredicted RBP5.82□□□□□ -1.48
CHFR-204ENST00000443047 KRTAP10-12P60413 245 aa5.81□□□□□ -1.48
CHFR-204ENST00000443047 FSIP2Q5CZC0 6907 aa5.67□□□□□ -1.5
CHFR-204ENST00000443047 KRTAP4-8A0A0G2JLE6 195 aa5.57□□□□□ -1.52
CHFR-204ENST00000443047 KRTAP4-8Q9BYQ9 185 aa5.57□□□□□ -1.52
CHFR-204ENST00000443047 SSPOA2VEC9 5147 aa5.53□□□□□ -1.52
CHFR-204ENST00000443047 LCE3CQ5T5A8 94 aa5.53□□□□□ -1.52
CHFR-204ENST00000443047 KRTAP19-5Q3LI72 72 aa5.52□□□□□ -1.53
CHFR-204ENST00000443047 KRTAP9-6A8MVA2 160 aa5.45□□□□□ -1.54
CHFR-204ENST00000443047 KRTAP4-7Q9BYR0 210 aa5.33□□□□□ -1.56
CHFR-204ENST00000443047 KRTAP2-3P0C7H8 128 aa5.3□□□□□ -1.56
CHFR-204ENST00000443047 KRTAP2-4Q9BYR9 128 aa5.3□□□□□ -1.56
CHFR-204ENST00000443047 KRTAP2-1Q9BYU5 128 aa5.3□□□□□ -1.56
CHFR-204ENST00000443047 KRTAP19-7Q3SYF9 63 aa5.29□□□□□ -1.56
CHFR-204ENST00000443047 FCGBPQ9Y6R7 5405 aaPredicted RBP5.22□□□□□ -1.57
CHFR-204ENST00000443047 MUC12Q9UKN1 5478 aa5.19□□□□□ -1.58
CHFR-204ENST00000443047 KRTAP19-6Q3LI70 58 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms