RNA–Protein interactions for RNA: ENST00000441517.6

SCAP-207, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,748 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-207ENST00000441517 KRTAP10-8P60410 259 aa7.83□□□□□ -1.16
SCAP-207ENST00000441517 XP32Q5T750 250 aa7.82□□□□□ -1.16
SCAP-207ENST00000441517 RPS29P62273 56 aaKnown RBP7.82□□□□□ -1.16
SCAP-207ENST00000441517 APOBP04114 4563 aaKnown RBP7.82□□□□□ -1.16
SCAP-207ENST00000441517 SACSQ9NZJ4 4579 aa7.82□□□□□ -1.16
SCAP-207ENST00000441517 P0C880 135 aa7.78□□□□□ -1.16
SCAP-207ENST00000441517 RPL37P61927 97 aaKnown RBP7.78□□□□□ -1.16
SCAP-207ENST00000441517 C10orf95Q9H7T3 257 aa7.77□□□□□ -1.17
SCAP-207ENST00000441517 RYR1P21817 5038 aa7.75□□□□□ -1.17
SCAP-207ENST00000441517 KRTAP10-4P60372 401 aaPredicted RBP7.71□□□□□ -1.18
SCAP-207ENST00000441517 PKD1P98161 4303 aa7.68□□□□□ -1.18
SCAP-207ENST00000441517 RYR3Q15413 4870 aa7.67□□□□□ -1.18
SCAP-207ENST00000441517 M0QZ58 72 aa7.67□□□□□ -1.18
SCAP-207ENST00000441517 R4GN34 69 aa7.66□□□□□ -1.18
SCAP-207ENST00000441517 ROMO1P60602 79 aa7.65□□□□□ -1.18
SCAP-207ENST00000441517 KRTAP25-1Q3LHN0 102 aa7.64□□□□□ -1.19
SCAP-207ENST00000441517 KRTAP13-4Q3LI77 160 aa7.62□□□□□ -1.19
SCAP-207ENST00000441517 KRTAP21-3Q3LHN1 58 aa7.62□□□□□ -1.19
SCAP-207ENST00000441517 KRTAP4-5Q9BYR2 181 aa7.58□□□□□ -1.2
SCAP-207ENST00000441517 LRP2P98164 4655 aa7.56□□□□□ -1.2
SCAP-207ENST00000441517 KRTAP17-1Q9BYP8 105 aa7.53□□□□□ -1.2
SCAP-207ENST00000441517 CAMK2N1Q7Z7J9 78 aa7.51□□□□□ -1.21
SCAP-207ENST00000441517 KRTAP10-6P60371 365 aaPredicted RBP7.5□□□□□ -1.21
SCAP-207ENST00000441517 HSPG2P98160 4391 aa7.48□□□□□ -1.21
SCAP-207ENST00000441517 RYR2Q92736 4967 aa7.48□□□□□ -1.21
SCAP-207ENST00000441517 KRTAP3-3Q9BYR6 98 aa7.48□□□□□ -1.21
SCAP-207ENST00000441517 PKHD1L1Q86WI1 4243 aa7.48□□□□□ -1.21
SCAP-207ENST00000441517 KRTAP12-2P59991 146 aa7.47□□□□□ -1.21
SCAP-207ENST00000441517 MT1HL1P0DM35 61 aa7.46□□□□□ -1.22
SCAP-207ENST00000441517 SEC61BP60468 96 aaKnown RBP7.44□□□□□ -1.22
SCAP-207ENST00000441517 M0R2T5 61 aa7.42□□□□□ -1.22
SCAP-207ENST00000441517 LPAP08519 4548 aa7.41□□□□□ -1.22
SCAP-207ENST00000441517 A0A0A0MQY5 61 aa7.39□□□□□ -1.23
SCAP-207ENST00000441517 EPPK1P58107 5090 aaKnown RBP7.38□□□□□ -1.23
SCAP-207ENST00000441517 KRTAP3-2Q9BYR7 98 aa7.37□□□□□ -1.23
SCAP-207ENST00000441517 TPRXLQ17RH7 258 aa7.35□□□□□ -1.23
SCAP-207ENST00000441517 NDUFAF8A1L188 74 aa7.29□□□□□ -1.24
SCAP-207ENST00000441517 MUC2Q02817 5179 aa7.27□□□□□ -1.25
SCAP-207ENST00000441517 KRTAP12-1P59990 96 aa7.27□□□□□ -1.25
SCAP-207ENST00000441517 ABCA13Q86UQ4 5058 aa7.22□□□□□ -1.25
SCAP-207ENST00000441517 LORP23490 312 aaPredicted RBP7.19□□□□□ -1.26
SCAP-207ENST00000441517 HERC2O95714 4834 aa7.13□□□□□ -1.27
SCAP-207ENST00000441517 KRTAP4-1Q9BYQ7 146 aa7.08□□□□□ -1.28
SCAP-207ENST00000441517 TNXBP22105 4242 aa7.07□□□□□ -1.28
SCAP-207ENST00000441517 LUZP6Q538Z0 58 aa6.96□□□□□ -1.29
SCAP-207ENST00000441517 RNF213Q63HN8 5207 aa6.96□□□□□ -1.3
SCAP-207ENST00000441517 FAT4Q6V0I7 4981 aa6.93□□□□□ -1.3
SCAP-207ENST00000441517 HERC1Q15751 4861 aa6.92□□□□□ -1.3
SCAP-207ENST00000441517 PLAC4Q8WY50 150 aa6.9□□□□□ -1.31
SCAP-207ENST00000441517 KRTAP10-10P60014 251 aa6.84□□□□□ -1.31
SCAP-207ENST00000441517 TNP1P09430 55 aa6.81□□□□□ -1.32
SCAP-207ENST00000441517 PCLOQ9Y6V0 5065 aa6.75□□□□□ -1.33
SCAP-207ENST00000441517 KRTAP15-1Q3LI76 137 aa6.7□□□□□ -1.34
SCAP-207ENST00000441517 UBR4Q5T4S7 5183 aa6.69□□□□□ -1.34
SCAP-207ENST00000441517 PP632Q6XCG6 107 aa6.51□□□□□ -1.37
SCAP-207ENST00000441517 FSIP2Q5CZC0 6907 aa6.5□□□□□ -1.37
SCAP-207ENST00000441517 HMCN2Q8NDA2 5059 aa6.49□□□□□ -1.37
SCAP-207ENST00000441517 BIRC6Q9NR09 4857 aa6.46□□□□□ -1.37
SCAP-207ENST00000441517 MUC17Q685J3 4493 aa6.43□□□□□ -1.38
SCAP-207ENST00000441517 KRTAP19-2Q3LHN2 52 aa6.33□□□□□ -1.4
SCAP-207ENST00000441517 LCE3AQ5TA76 89 aa6.32□□□□□ -1.4
SCAP-207ENST00000441517 MT1HP80294 61 aa6.3□□□□□ -1.4
SCAP-207ENST00000441517 FLGP20930 4061 aaPredicted RBP6.29□□□□□ -1.4
SCAP-207ENST00000441517 MT1FP04733 61 aa6.28□□□□□ -1.4
SCAP-207ENST00000441517 USH2AO75445 5202 aa6.26□□□□□ -1.41
SCAP-207ENST00000441517 MT2AP02795 61 aa6.24□□□□□ -1.41
SCAP-207ENST00000441517 KRTAP19-1Q8IUB9 90 aa6.21□□□□□ -1.41
SCAP-207ENST00000441517 LCE2CQ5TA81 110 aa6.21□□□□□ -1.42
SCAP-207ENST00000441517 SPRR2GQ9BYE4 73 aa6.09□□□□□ -1.43
SCAP-207ENST00000441517 KMT2DO14686 5537 aa6.08□□□□□ -1.44
SCAP-207ENST00000441517 KRTAP10-12P60413 245 aa6.08□□□□□ -1.44
SCAP-207ENST00000441517 PRO2289Q9P1D8 64 aa6.03□□□□□ -1.44
SCAP-207ENST00000441517 KRTAP12-3P60328 96 aa6.02□□□□□ -1.45
SCAP-207ENST00000441517 KRTAP9-8Q9BYQ0 159 aa6□□□□□ -1.45
SCAP-207ENST00000441517 OBSCNQ5VST9 7968 aa5.96□□□□□ -1.46
SCAP-207ENST00000441517 KRTAP10-7P60409 375 aaPredicted RBP5.96□□□□□ -1.46
SCAP-207ENST00000441517 MT1BP07438 61 aa5.88□□□□□ -1.47
SCAP-207ENST00000441517 MT1XP80297 61 aa5.86□□□□□ -1.47
SCAP-207ENST00000441517 KRTAP10-5P60370 271 aa5.85□□□□□ -1.47
SCAP-207ENST00000441517 KRTAP4-8A0A0G2JLE6 195 aa5.83□□□□□ -1.48
SCAP-207ENST00000441517 KRTAP4-8Q9BYQ9 185 aa5.83□□□□□ -1.48
SCAP-207ENST00000441517 DSTQ03001 7570 aaKnown RBP5.83□□□□□ -1.48
SCAP-207ENST00000441517 CRCT1Q9UGL9 99 aa5.82□□□□□ -1.48
SCAP-207ENST00000441517 KRTAP19-5Q3LI72 72 aa5.75□□□□□ -1.49
SCAP-207ENST00000441517 SYNE1Q8NF91 8797 aaKnown RBP5.74□□□□□ -1.49
SCAP-207ENST00000441517 KRTAP23-1A1A580 65 aa5.74□□□□□ -1.49
SCAP-207ENST00000441517 KRTAP9-3Q9BYQ3 159 aa5.72□□□□□ -1.49
SCAP-207ENST00000441517 KRTAP19-8Q3LI54 63 aa5.71□□□□□ -1.5
SCAP-207ENST00000441517 KRTAP8-1Q8IUC2 63 aa5.71□□□□□ -1.5
SCAP-207ENST00000441517 LCE2BO14633 110 aa5.68□□□□□ -1.5
SCAP-207ENST00000441517 FCGBPQ9Y6R7 5405 aaPredicted RBP5.65□□□□□ -1.51
SCAP-207ENST00000441517 KRTAP4-7Q9BYR0 210 aa5.63□□□□□ -1.51
SCAP-207ENST00000441517 SPRR5A0A1B0GTR4 108 aa5.54□□□□□ -1.52
SCAP-207ENST00000441517 LCE3CQ5T5A8 94 aa5.46□□□□□ -1.53
SCAP-207ENST00000441517 MUC12Q9UKN1 5478 aa5.44□□□□□ -1.54
SCAP-207ENST00000441517 SSPOA2VEC9 5147 aa5.3□□□□□ -1.56
SCAP-207ENST00000441517 SYNE2Q8WXH0 6885 aaKnown RBP5.29□□□□□ -1.56
SCAP-207ENST00000441517 KRTAP4-3Q9BYR4 195 aa5.27□□□□□ -1.57
SCAP-207ENST00000441517 INE1O15225 51 aa5.25□□□□□ -1.57
SCAP-207ENST00000441517 LCE2AQ5TA79 106 aaPredicted RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 165.6 ms