RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 A0A1B0GU33 70 aa6.51□□□□□ -1.37
LTBR-203ENST00000441074 TYMSOSQ8TAI1 123 aa6.51□□□□□ -1.37
LTBR-203ENST00000441074 KRTAP10-4P60372 401 aaPredicted RBP6.5□□□□□ -1.37
LTBR-203ENST00000441074 Q5VSD8 79 aa6.49□□□□□ -1.37
LTBR-203ENST00000441074 RPS29P62273 56 aaKnown RBP6.49□□□□□ -1.37
LTBR-203ENST00000441074 LRP1Q07954 4544 aaKnown RBP6.48□□□□□ -1.37
LTBR-203ENST00000441074 H1FX-AS1Q4G0G2 97 aa6.48□□□□□ -1.37
LTBR-203ENST00000441074 HERC2O95714 4834 aa6.48□□□□□ -1.37
LTBR-203ENST00000441074 KRTAP4-5Q9BYR2 181 aa6.47□□□□□ -1.37
LTBR-203ENST00000441074 LCE2AQ5TA79 106 aaPredicted RBP6.45□□□□□ -1.38
LTBR-203ENST00000441074 MYCBP2O75592 4640 aa6.44□□□□□ -1.38
LTBR-203ENST00000441074 FLG2Q5D862 2391 aaPredicted RBP6.42□□□□□ -1.38
LTBR-203ENST00000441074 K7ERS5 55 aa6.41□□□□□ -1.38
LTBR-203ENST00000441074 KRTAP3-1Q9BYR8 98 aa6.41□□□□□ -1.38
LTBR-203ENST00000441074 PKHD1L1Q86WI1 4243 aa6.38□□□□□ -1.39
LTBR-203ENST00000441074 ABCA13Q86UQ4 5058 aa6.37□□□□□ -1.39
LTBR-203ENST00000441074 C20orf166-AS1Q96NR2 134 aa6.35□□□□□ -1.39
LTBR-203ENST00000441074 CRIPTQ9P021 101 aa6.35□□□□□ -1.39
LTBR-203ENST00000441074 P0C880 135 aa6.33□□□□□ -1.4
LTBR-203ENST00000441074 COX6B2Q6YFQ2 88 aa6.33□□□□□ -1.4
LTBR-203ENST00000441074 PCLOQ9Y6V0 5065 aa6.31□□□□□ -1.4
LTBR-203ENST00000441074 DMBT1Q9UGM3 2413 aaPredicted RBP6.29□□□□□ -1.4
LTBR-203ENST00000441074 FAT3Q8TDW7 4589 aa6.29□□□□□ -1.4
LTBR-203ENST00000441074 TNXBP22105 4242 aa6.29□□□□□ -1.4
LTBR-203ENST00000441074 C9orf92A6NGG3 77 aa6.26□□□□□ -1.41
LTBR-203ENST00000441074 A0A0A0MQY5 61 aa6.25□□□□□ -1.41
LTBR-203ENST00000441074 RPL37P61927 97 aaKnown RBP6.24□□□□□ -1.41
LTBR-203ENST00000441074 LORP23490 312 aaPredicted RBP6.23□□□□□ -1.41
LTBR-203ENST00000441074 KRTAP10-8P60410 259 aa6.2□□□□□ -1.42
LTBR-203ENST00000441074 TPRXLQ17RH7 258 aa6.2□□□□□ -1.42
LTBR-203ENST00000441074 MT1HL1P0DM35 61 aa6.19□□□□□ -1.42
LTBR-203ENST00000441074 SPINT4Q6UDR6 99 aa6.19□□□□□ -1.42
LTBR-203ENST00000441074 KRTAP10-6P60371 365 aaPredicted RBP6.17□□□□□ -1.42
LTBR-203ENST00000441074 KRTAP13-4Q3LI77 160 aa6.15□□□□□ -1.43
LTBR-203ENST00000441074 A0A0D9SG42 100 aa6.13□□□□□ -1.43
LTBR-203ENST00000441074 HERC1Q15751 4861 aa6.12□□□□□ -1.43
LTBR-203ENST00000441074 KRTAP15-1Q3LI76 137 aa6.1□□□□□ -1.43
LTBR-203ENST00000441074 C10orf95Q9H7T3 257 aa6.08□□□□□ -1.44
LTBR-203ENST00000441074 LPAP08519 4548 aa6.06□□□□□ -1.44
LTBR-203ENST00000441074 NDUFAF8A1L188 74 aa6.05□□□□□ -1.44
LTBR-203ENST00000441074 S4R3F8 94 aa6.03□□□□□ -1.44
LTBR-203ENST00000441074 LRP2P98164 4655 aa6□□□□□ -1.45
LTBR-203ENST00000441074 KRTAP12-2P59991 146 aa5.98□□□□□ -1.45
LTBR-203ENST00000441074 XP32Q5T750 250 aa5.95□□□□□ -1.46
LTBR-203ENST00000441074 KRTAP12-1P59990 96 aa5.93□□□□□ -1.46
LTBR-203ENST00000441074 HMCN2Q8NDA2 5059 aa5.92□□□□□ -1.46
LTBR-203ENST00000441074 MUC2Q02817 5179 aa5.9□□□□□ -1.47
LTBR-203ENST00000441074 KRTAP23-1A1A580 65 aa5.89□□□□□ -1.47
LTBR-203ENST00000441074 M0QZ58 72 aa5.83□□□□□ -1.48
LTBR-203ENST00000441074 UBR4Q5T4S7 5183 aa5.76□□□□□ -1.49
LTBR-203ENST00000441074 SEC61BP60468 96 aaKnown RBP5.71□□□□□ -1.49
LTBR-203ENST00000441074 RNF213Q63HN8 5207 aa5.68□□□□□ -1.5
LTBR-203ENST00000441074 KRTAP4-1Q9BYQ7 146 aa5.68□□□□□ -1.5
LTBR-203ENST00000441074 PLAC4Q8WY50 150 aa5.67□□□□□ -1.5
LTBR-203ENST00000441074 MUC17Q685J3 4493 aa5.62□□□□□ -1.51
LTBR-203ENST00000441074 LUZP6Q538Z0 58 aa5.58□□□□□ -1.52
LTBR-203ENST00000441074 R4GN34 69 aa5.58□□□□□ -1.52
LTBR-203ENST00000441074 FAT4Q6V0I7 4981 aa5.57□□□□□ -1.52
LTBR-203ENST00000441074 PP632Q6XCG6 107 aa5.49□□□□□ -1.53
LTBR-203ENST00000441074 KRTAP19-2Q3LHN2 52 aa5.46□□□□□ -1.54
LTBR-203ENST00000441074 CAMK2N1Q7Z7J9 78 aa5.34□□□□□ -1.56
LTBR-203ENST00000441074 FLGP20930 4061 aaPredicted RBP5.33□□□□□ -1.56
LTBR-203ENST00000441074 SPRR5A0A1B0GTR4 108 aa5.25□□□□□ -1.57
LTBR-203ENST00000441074 MT1HP80294 61 aa5.23□□□□□ -1.57
LTBR-203ENST00000441074 TNP1P09430 55 aa5.2□□□□□ -1.58
LTBR-203ENST00000441074 M0R2T5 61 aa5.19□□□□□ -1.58
LTBR-203ENST00000441074 MT1FP04733 61 aa5.01□□□□□ -1.61
LTBR-203ENST00000441074 KRTAP9-8Q9BYQ0 159 aa5.01□□□□□ -1.61
LTBR-203ENST00000441074 MT2AP02795 61 aa5□□□□□ -1.61
LTBR-203ENST00000441074 PRO2289Q9P1D8 64 aa5□□□□□ -1.61
LTBR-203ENST00000441074 KRTAP10-10P60014 251 aa4.98□□□□□ -1.61
LTBR-203ENST00000441074 KRTAP19-4Q3LI73 84 aa4.97□□□□□ -1.61
LTBR-203ENST00000441074 SPRR2GQ9BYE4 73 aa4.95□□□□□ -1.62
LTBR-203ENST00000441074 KRTAP19-1Q8IUB9 90 aa4.94□□□□□ -1.62
LTBR-203ENST00000441074 USH2AO75445 5202 aa4.93□□□□□ -1.62
LTBR-203ENST00000441074 INE1O15225 51 aa4.9□□□□□ -1.62
LTBR-203ENST00000441074 KRTAP9-6A0A140TA67 174 aa4.89□□□□□ -1.63
LTBR-203ENST00000441074 LCE3AQ5TA76 89 aa4.86□□□□□ -1.63
LTBR-203ENST00000441074 KRTAP9-2Q9BYQ4 174 aa4.86□□□□□ -1.63
LTBR-203ENST00000441074 KRTAP9-3Q9BYQ3 159 aa4.83□□□□□ -1.64
LTBR-203ENST00000441074 FSIP2Q5CZC0 6907 aa4.82□□□□□ -1.64
LTBR-203ENST00000441074 KRTAP8-1Q8IUC2 63 aa4.77□□□□□ -1.65
LTBR-203ENST00000441074 MT1BP07438 61 aa4.73□□□□□ -1.65
LTBR-203ENST00000441074 KRTAP19-8Q3LI54 63 aa4.72□□□□□ -1.65
LTBR-203ENST00000441074 CRCT1Q9UGL9 99 aa4.64□□□□□ -1.67
LTBR-203ENST00000441074 KRTAP12-3P60328 96 aa4.63□□□□□ -1.67
LTBR-203ENST00000441074 SSPOA2VEC9 5147 aa4.63□□□□□ -1.67
LTBR-203ENST00000441074 KRTAP10-5P60370 271 aa4.61□□□□□ -1.67
LTBR-203ENST00000441074 MT1XP80297 61 aa4.61□□□□□ -1.67
LTBR-203ENST00000441074 KRTAP10-12P60413 245 aa4.6□□□□□ -1.67
LTBR-203ENST00000441074 KMT2DO14686 5537 aa4.59□□□□□ -1.67
LTBR-203ENST00000441074 KRTAP9-4Q9BYQ2 154 aa4.54□□□□□ -1.68
LTBR-203ENST00000441074 KRTAP9-7A8MTY7 169 aa4.51□□□□□ -1.69
LTBR-203ENST00000441074 KRTAP19-6Q3LI70 58 aa4.51□□□□□ -1.69
LTBR-203ENST00000441074 KRTAP10-7P60409 375 aaPredicted RBP4.5□□□□□ -1.69
LTBR-203ENST00000441074 FCGBPQ9Y6R7 5405 aaPredicted RBP4.49□□□□□ -1.69
LTBR-203ENST00000441074 LCE4AQ5TA78 99 aa4.47□□□□□ -1.69
LTBR-203ENST00000441074 KRTAP9-9Q9BYP9 154 aa4.43□□□□□ -1.7
LTBR-203ENST00000441074 LCE5AQ5TCM9 118 aa4.39□□□□□ -1.71
LTBR-203ENST00000441074 LCE3CQ5T5A8 94 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms