RNA–Protein interactions for RNA: ENST00000440551.1

H3F3BP1-201, Transcript of H3 histone, family 3B pseudogene 1, humanhuman

BASIC

Gene H3F3BP1, Length 403 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3BP1-201ENST00000440551 KRTAP3-1Q9BYR8 98 aa3.39□□□□□ -1.87
H3F3BP1-201ENST00000440551 DNAH17Q9UFH2 4485 aa3.38□□□□□ -1.87
H3F3BP1-201ENST00000440551 UBR4Q5T4S7 5183 aa3.37□□□□□ -1.87
H3F3BP1-201ENST00000440551 A0A0A0MQY5 61 aa3.37□□□□□ -1.87
H3F3BP1-201ENST00000440551 VPS13DQ5THJ4 4388 aa3.37□□□□□ -1.87
H3F3BP1-201ENST00000440551 DNAH9Q9NYC9 4486 aa3.36□□□□□ -1.87
H3F3BP1-201ENST00000440551 STAB2Q8WWQ8 2551 aa3.35□□□□□ -1.87
H3F3BP1-201ENST00000440551 SACSQ9NZJ4 4579 aa3.34□□□□□ -1.87
H3F3BP1-201ENST00000440551 RPS29P62273 56 aaKnown RBP3.33□□□□□ -1.88
H3F3BP1-201ENST00000440551 FLG2Q5D862 2391 aaPredicted RBP3.32□□□□□ -1.88
H3F3BP1-201ENST00000440551 KRTAP1-4P0C5Y4 121 aa3.32□□□□□ -1.88
H3F3BP1-201ENST00000440551 FRAS1Q86XX4 4008 aa3.31□□□□□ -1.88
H3F3BP1-201ENST00000440551 KRTAP10-6P60371 365 aaPredicted RBP3.31□□□□□ -1.88
H3F3BP1-201ENST00000440551 KRTAP5-3Q6L8H2 238 aa3.29□□□□□ -1.88
H3F3BP1-201ENST00000440551 C10orf95Q9H7T3 257 aa3.29□□□□□ -1.88
H3F3BP1-201ENST00000440551 LYSTQ99698 3801 aa3.28□□□□□ -1.88
H3F3BP1-201ENST00000440551 KRTAP13-4Q3LI77 160 aa3.27□□□□□ -1.89
H3F3BP1-201ENST00000440551 S4R3F8 94 aa3.27□□□□□ -1.89
H3F3BP1-201ENST00000440551 DNAH11Q96DT5 4516 aa3.26□□□□□ -1.89
H3F3BP1-201ENST00000440551 A0A0D9SG42 100 aa3.25□□□□□ -1.89
H3F3BP1-201ENST00000440551 KRTAP9-8Q9BYQ0 159 aa3.24□□□□□ -1.89
H3F3BP1-201ENST00000440551 KIAA1109Q2LD37 5005 aa3.24□□□□□ -1.89
H3F3BP1-201ENST00000440551 DNAH2Q9P225 4427 aa3.23□□□□□ -1.89
H3F3BP1-201ENST00000440551 DNAH7Q8WXX0 4024 aa3.23□□□□□ -1.89
H3F3BP1-201ENST00000440551 HERC1Q15751 4861 aa3.23□□□□□ -1.89
H3F3BP1-201ENST00000440551 LUZP6Q538Z0 58 aa3.23□□□□□ -1.89
H3F3BP1-201ENST00000440551 KRTAP4-11Q9BYQ6 195 aa3.23□□□□□ -1.89
H3F3BP1-201ENST00000440551 ABCA13Q86UQ4 5058 aa3.23□□□□□ -1.89
H3F3BP1-201ENST00000440551 HECTD4Q9Y4D8 3996 aa3.22□□□□□ -1.89
H3F3BP1-201ENST00000440551 KRTAP4-5Q9BYR2 181 aa3.22□□□□□ -1.89
H3F3BP1-201ENST00000440551 CSMD3Q7Z407 3707 aa3.22□□□□□ -1.89
H3F3BP1-201ENST00000440551 DNAH6Q9C0G6 4158 aa3.21□□□□□ -1.9
H3F3BP1-201ENST00000440551 PLECQ15149 4684 aaKnown RBP3.2□□□□□ -1.9
H3F3BP1-201ENST00000440551 C9orf92A6NGG3 77 aa3.2□□□□□ -1.9
H3F3BP1-201ENST00000440551 KRTAP12-2P59991 146 aa3.2□□□□□ -1.9
H3F3BP1-201ENST00000440551 KRTAP10-1P60331 282 aa3.2□□□□□ -1.9
H3F3BP1-201ENST00000440551 J3QL48 77 aa3.19□□□□□ -1.9
H3F3BP1-201ENST00000440551 KRTAP12-1P59990 96 aa3.19□□□□□ -1.9
H3F3BP1-201ENST00000440551 KRTAP10-2P60368 255 aa3.19□□□□□ -1.9
H3F3BP1-201ENST00000440551 DMBT1Q9UGM3 2413 aaPredicted RBP3.14□□□□□ -1.91
H3F3BP1-201ENST00000440551 STARD9Q9P2P6 4700 aa3.14□□□□□ -1.91
H3F3BP1-201ENST00000440551 M0QZ58 72 aa3.14□□□□□ -1.91
H3F3BP1-201ENST00000440551 PLAC4Q8WY50 150 aa3.13□□□□□ -1.91
H3F3BP1-201ENST00000440551 LRP1BQ9NZR2 4599 aa3.11□□□□□ -1.91
H3F3BP1-201ENST00000440551 DNAH5Q8TE73 4624 aa3.1□□□□□ -1.91
H3F3BP1-201ENST00000440551 PKHD1L1Q86WI1 4243 aa3.09□□□□□ -1.92
H3F3BP1-201ENST00000440551 SEC61BP60468 96 aaKnown RBP3.08□□□□□ -1.92
H3F3BP1-201ENST00000440551 KRTAP10-8P60410 259 aa3.05□□□□□ -1.92
H3F3BP1-201ENST00000440551 KMT2AQ03164 3969 aa3.03□□□□□ -1.92
H3F3BP1-201ENST00000440551 PKHD1P08F94 4074 aa3.03□□□□□ -1.92
H3F3BP1-201ENST00000440551 PP632Q6XCG6 107 aa3.03□□□□□ -1.92
H3F3BP1-201ENST00000440551 DYNC1H1Q14204 4646 aaKnown RBP3.01□□□□□ -1.93
H3F3BP1-201ENST00000440551 VPS13BQ7Z7G8 4022 aa3□□□□□ -1.93
H3F3BP1-201ENST00000440551 HSPG2P98160 4391 aa2.99□□□□□ -1.93
H3F3BP1-201ENST00000440551 KRTAP10-4P60372 401 aaPredicted RBP2.99□□□□□ -1.93
H3F3BP1-201ENST00000440551 PKD1P98161 4303 aa2.98□□□□□ -1.93
H3F3BP1-201ENST00000440551 FAT2Q9NYQ8 4349 aa2.97□□□□□ -1.93
H3F3BP1-201ENST00000440551 LRP1Q07954 4544 aaKnown RBP2.97□□□□□ -1.93
H3F3BP1-201ENST00000440551 CAMK2N1Q7Z7J9 78 aa2.95□□□□□ -1.94
H3F3BP1-201ENST00000440551 HMCN2Q8NDA2 5059 aa2.94□□□□□ -1.94
H3F3BP1-201ENST00000440551 APOBP04114 4563 aaKnown RBP2.94□□□□□ -1.94
H3F3BP1-201ENST00000440551 RNF213Q63HN8 5207 aa2.93□□□□□ -1.94
H3F3BP1-201ENST00000440551 SMR3BP02814 79 aaPredicted RBP2.93□□□□□ -1.94
H3F3BP1-201ENST00000440551 LCE5AQ5TCM9 118 aa2.93□□□□□ -1.94
H3F3BP1-201ENST00000440551 TNXBP22105 4242 aa2.93□□□□□ -1.94
H3F3BP1-201ENST00000440551 MYCBP2O75592 4640 aa2.92□□□□□ -1.94
H3F3BP1-201ENST00000440551 MUC2Q02817 5179 aa2.92□□□□□ -1.94
H3F3BP1-201ENST00000440551 SPRR5A0A1B0GTR4 108 aa2.92□□□□□ -1.94
H3F3BP1-201ENST00000440551 A0A1B0GVY2 172 aa2.92□□□□□ -1.94
H3F3BP1-201ENST00000440551 LCE4AQ5TA78 99 aa2.92□□□□□ -1.94
H3F3BP1-201ENST00000440551 KRTAP23-1A1A580 65 aa2.91□□□□□ -1.94
H3F3BP1-201ENST00000440551 R4GN34 69 aa2.91□□□□□ -1.94
H3F3BP1-201ENST00000440551 FAT3Q8TDW7 4589 aa2.91□□□□□ -1.94
H3F3BP1-201ENST00000440551 PRO2289Q9P1D8 64 aa2.9□□□□□ -1.95
H3F3BP1-201ENST00000440551 FAT1Q14517 4588 aa2.89□□□□□ -1.95
H3F3BP1-201ENST00000440551 FAT4Q6V0I7 4981 aa2.85□□□□□ -1.95
H3F3BP1-201ENST00000440551 INE1O15225 51 aa2.83□□□□□ -1.96
H3F3BP1-201ENST00000440551 FSIP2Q5CZC0 6907 aa2.82□□□□□ -1.96
H3F3BP1-201ENST00000440551 TNP1P09430 55 aa2.78□□□□□ -1.96
H3F3BP1-201ENST00000440551 LRP2P98164 4655 aa2.77□□□□□ -1.97
H3F3BP1-201ENST00000440551 KRTAP9-7A8MTY7 169 aa2.76□□□□□ -1.97
H3F3BP1-201ENST00000440551 CRCT1Q9UGL9 99 aa2.75□□□□□ -1.97
H3F3BP1-201ENST00000440551 Q5VSD8 79 aa2.74□□□□□ -1.97
H3F3BP1-201ENST00000440551 KRTAP9-3Q9BYQ3 159 aa2.73□□□□□ -1.97
H3F3BP1-201ENST00000440551 MT1HL1P0DM35 61 aa2.71□□□□□ -1.98
H3F3BP1-201ENST00000440551 FLGP20930 4061 aaPredicted RBP2.62□□□□□ -1.99
H3F3BP1-201ENST00000440551 KRTAP19-2Q3LHN2 52 aa2.62□□□□□ -1.99
H3F3BP1-201ENST00000440551 KRTAP19-4Q3LI73 84 aa2.58□□□□□ -2
H3F3BP1-201ENST00000440551 KRTAP4-1Q9BYQ7 146 aa2.58□□□□□ -2
H3F3BP1-201ENST00000440551 MUC17Q685J3 4493 aa2.57□□□□□ -2
H3F3BP1-201ENST00000440551 LCE3AQ5TA76 89 aa2.56□□□□□ -2
H3F3BP1-201ENST00000440551 KRTAP8-1Q8IUC2 63 aa2.56□□□□□ -2
H3F3BP1-201ENST00000440551 LPAP08519 4548 aa2.55□□□□□ -2
H3F3BP1-201ENST00000440551 SPRR2GQ9BYE4 73 aa2.51□□□□□ -2.01
H3F3BP1-201ENST00000440551 SYNE2Q8WXH0 6885 aaKnown RBP2.49□□□□□ -2.01
H3F3BP1-201ENST00000440551 SSPOA2VEC9 5147 aa2.48□□□□□ -2.01
H3F3BP1-201ENST00000440551 KRTAP10-10P60014 251 aa2.47□□□□□ -2.01
H3F3BP1-201ENST00000440551 KRTAP10-12P60413 245 aa2.47□□□□□ -2.01
H3F3BP1-201ENST00000440551 KRTAP12-3P60328 96 aa2.45□□□□□ -2.02
H3F3BP1-201ENST00000440551 MACF1Q9UPN3 7388 aaKnown RBP2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms