RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 J3QL48 77 aa6.05□□□□□ -1.44
SMPD4-209ENST00000439886 HYDINQ4G0P3 5121 aa6.04□□□□□ -1.44
SMPD4-209ENST00000439886 KRTAP10-6P60371 365 aaPredicted RBP6.01□□□□□ -1.45
SMPD4-209ENST00000439886 RPS29P62273 56 aaKnown RBP5.99□□□□□ -1.45
SMPD4-209ENST00000439886 KRTAP12-2P59991 146 aa5.97□□□□□ -1.45
SMPD4-209ENST00000439886 FAT1Q14517 4588 aa5.96□□□□□ -1.46
SMPD4-209ENST00000439886 PKHD1P08F94 4074 aa5.93□□□□□ -1.46
SMPD4-209ENST00000439886 KRTAP10-8P60410 259 aa5.93□□□□□ -1.46
SMPD4-209ENST00000439886 KRTAP3-3Q9BYR6 98 aa5.92□□□□□ -1.46
SMPD4-209ENST00000439886 FAT2Q9NYQ8 4349 aa5.92□□□□□ -1.46
SMPD4-209ENST00000439886 KRTAP3-2Q9BYR7 98 aa5.9□□□□□ -1.46
SMPD4-209ENST00000439886 PLAC4Q8WY50 150 aa5.89□□□□□ -1.47
SMPD4-209ENST00000439886 KMT2CQ8NEZ4 4911 aaKnown RBP5.88□□□□□ -1.47
SMPD4-209ENST00000439886 MYCBP2O75592 4640 aa5.86□□□□□ -1.47
SMPD4-209ENST00000439886 CAMK2N1Q7Z7J9 78 aa5.85□□□□□ -1.47
SMPD4-209ENST00000439886 KRTAP12-1P59990 96 aa5.83□□□□□ -1.48
SMPD4-209ENST00000439886 SACSQ9NZJ4 4579 aa5.82□□□□□ -1.48
SMPD4-209ENST00000439886 M0QZ58 72 aa5.82□□□□□ -1.48
SMPD4-209ENST00000439886 DYNC1H1Q14204 4646 aaKnown RBP5.8□□□□□ -1.48
SMPD4-209ENST00000439886 XP32Q5T750 250 aa5.79□□□□□ -1.48
SMPD4-209ENST00000439886 PKD1P98161 4303 aa5.79□□□□□ -1.48
SMPD4-209ENST00000439886 R4GN34 69 aa5.78□□□□□ -1.48
SMPD4-209ENST00000439886 RYR2Q92736 4967 aa5.75□□□□□ -1.49
SMPD4-209ENST00000439886 RYR3Q15413 4870 aa5.73□□□□□ -1.49
SMPD4-209ENST00000439886 LRP1Q07954 4544 aaKnown RBP5.72□□□□□ -1.49
SMPD4-209ENST00000439886 APOBP04114 4563 aaKnown RBP5.7□□□□□ -1.5
SMPD4-209ENST00000439886 Q5VSD8 79 aa5.7□□□□□ -1.5
SMPD4-209ENST00000439886 KRTAP10-4P60372 401 aaPredicted RBP5.67□□□□□ -1.5
SMPD4-209ENST00000439886 HSPG2P98160 4391 aa5.66□□□□□ -1.5
SMPD4-209ENST00000439886 A0A1B0GVY2 172 aa5.62□□□□□ -1.51
SMPD4-209ENST00000439886 FAT3Q8TDW7 4589 aa5.61□□□□□ -1.51
SMPD4-209ENST00000439886 KIAA1109Q2LD37 5005 aa5.58□□□□□ -1.52
SMPD4-209ENST00000439886 EPPK1P58107 5090 aaKnown RBP5.55□□□□□ -1.52
SMPD4-209ENST00000439886 PRO2289Q9P1D8 64 aa5.54□□□□□ -1.52
SMPD4-209ENST00000439886 LRP2P98164 4655 aa5.5□□□□□ -1.53
SMPD4-209ENST00000439886 LORP23490 312 aaPredicted RBP5.49□□□□□ -1.53
SMPD4-209ENST00000439886 PKHD1L1Q86WI1 4243 aa5.48□□□□□ -1.53
SMPD4-209ENST00000439886 LPAP08519 4548 aa5.48□□□□□ -1.53
SMPD4-209ENST00000439886 RYR1P21817 5038 aa5.43□□□□□ -1.54
SMPD4-209ENST00000439886 KRTAP17-1Q9BYP8 105 aa5.39□□□□□ -1.55
SMPD4-209ENST00000439886 MT1HL1P0DM35 61 aa5.35□□□□□ -1.55
SMPD4-209ENST00000439886 KRTAP4-5Q9BYR2 181 aa5.33□□□□□ -1.56
SMPD4-209ENST00000439886 TNXBP22105 4242 aa5.32□□□□□ -1.56
SMPD4-209ENST00000439886 PP632Q6XCG6 107 aa5.31□□□□□ -1.56
SMPD4-209ENST00000439886 BIRC6Q9NR09 4857 aa5.3□□□□□ -1.56
SMPD4-209ENST00000439886 ABCA13Q86UQ4 5058 aa5.3□□□□□ -1.56
SMPD4-209ENST00000439886 TNP1P09430 55 aa5.27□□□□□ -1.57
SMPD4-209ENST00000439886 MUC2Q02817 5179 aa5.26□□□□□ -1.57
SMPD4-209ENST00000439886 INE1O15225 51 aa5.22□□□□□ -1.57
SMPD4-209ENST00000439886 HERC2O95714 4834 aa5.21□□□□□ -1.58
SMPD4-209ENST00000439886 PCLOQ9Y6V0 5065 aa5.15□□□□□ -1.58
SMPD4-209ENST00000439886 KRTAP4-1Q9BYQ7 146 aa5.15□□□□□ -1.59
SMPD4-209ENST00000439886 HERC1Q15751 4861 aa5.1□□□□□ -1.59
SMPD4-209ENST00000439886 M0R2T5 61 aa5.05□□□□□ -1.6
SMPD4-209ENST00000439886 RNF213Q63HN8 5207 aa5.04□□□□□ -1.6
SMPD4-209ENST00000439886 SPRR5A0A1B0GTR4 108 aa4.99□□□□□ -1.61
SMPD4-209ENST00000439886 FAT4Q6V0I7 4981 aa4.98□□□□□ -1.61
SMPD4-209ENST00000439886 LCE3AQ5TA76 89 aa4.9□□□□□ -1.62
SMPD4-209ENST00000439886 UBR4Q5T4S7 5183 aa4.9□□□□□ -1.62
SMPD4-209ENST00000439886 MUC17Q685J3 4493 aa4.9□□□□□ -1.63
SMPD4-209ENST00000439886 KRTAP23-1A1A580 65 aa4.87□□□□□ -1.63
SMPD4-209ENST00000439886 HMCN2Q8NDA2 5059 aa4.82□□□□□ -1.64
SMPD4-209ENST00000439886 KRTAP10-10P60014 251 aa4.81□□□□□ -1.64
SMPD4-209ENST00000439886 KRTAP19-2Q3LHN2 52 aa4.8□□□□□ -1.64
SMPD4-209ENST00000439886 FLGP20930 4061 aaPredicted RBP4.7□□□□□ -1.66
SMPD4-209ENST00000439886 KRTAP19-1Q8IUB9 90 aa4.66□□□□□ -1.66
SMPD4-209ENST00000439886 KRTAP12-3P60328 96 aa4.64□□□□□ -1.67
SMPD4-209ENST00000439886 SPRR2GQ9BYE4 73 aa4.62□□□□□ -1.67
SMPD4-209ENST00000439886 KRTAP10-12P60413 245 aa4.59□□□□□ -1.67
SMPD4-209ENST00000439886 FSIP2Q5CZC0 6907 aa4.57□□□□□ -1.68
SMPD4-209ENST00000439886 MT1FP04733 61 aa4.55□□□□□ -1.68
SMPD4-209ENST00000439886 KRTAP8-1Q8IUC2 63 aa4.55□□□□□ -1.68
SMPD4-209ENST00000439886 MT2AP02795 61 aa4.51□□□□□ -1.69
SMPD4-209ENST00000439886 USH2AO75445 5202 aa4.5□□□□□ -1.69
SMPD4-209ENST00000439886 LCE2CQ5TA81 110 aa4.5□□□□□ -1.69
SMPD4-209ENST00000439886 MT1HP80294 61 aa4.48□□□□□ -1.69
SMPD4-209ENST00000439886 KRTAP10-7P60409 375 aaPredicted RBP4.46□□□□□ -1.7
SMPD4-209ENST00000439886 KRTAP10-5P60370 271 aa4.43□□□□□ -1.7
SMPD4-209ENST00000439886 MT1XP80297 61 aa4.43□□□□□ -1.7
SMPD4-209ENST00000439886 MT1BP07438 61 aa4.37□□□□□ -1.71
SMPD4-209ENST00000439886 KRTAP19-5Q3LI72 72 aa4.34□□□□□ -1.71
SMPD4-209ENST00000439886 KRTAP9-8Q9BYQ0 159 aa4.34□□□□□ -1.71
SMPD4-209ENST00000439886 KMT2DO14686 5537 aa4.34□□□□□ -1.71
SMPD4-209ENST00000439886 KRTAP19-8Q3LI54 63 aa4.31□□□□□ -1.72
SMPD4-209ENST00000439886 LCE3CQ5T5A8 94 aa4.3□□□□□ -1.72
SMPD4-209ENST00000439886 KRTAP4-8A0A0G2JLE6 195 aa4.23□□□□□ -1.73
SMPD4-209ENST00000439886 KRTAP4-8Q9BYQ9 185 aa4.23□□□□□ -1.73
SMPD4-209ENST00000439886 KRTAP4-7Q9BYR0 210 aa4.22□□□□□ -1.73
SMPD4-209ENST00000439886 LCE2AQ5TA79 106 aaPredicted RBP4.2□□□□□ -1.74
SMPD4-209ENST00000439886 KRTAP9-6A8MVA2 160 aa4.16□□□□□ -1.74
SMPD4-209ENST00000439886 KRTAP9-3Q9BYQ3 159 aa4.13□□□□□ -1.75
SMPD4-209ENST00000439886 CRCT1Q9UGL9 99 aa4.12□□□□□ -1.75
SMPD4-209ENST00000439886 LCE2BO14633 110 aa4.02□□□□□ -1.77
SMPD4-209ENST00000439886 DSTQ03001 7570 aaKnown RBP3.95□□□□□ -1.78
SMPD4-209ENST00000439886 KRTAP2-3P0C7H8 128 aa3.95□□□□□ -1.78
SMPD4-209ENST00000439886 KRTAP2-4Q9BYR9 128 aa3.95□□□□□ -1.78
SMPD4-209ENST00000439886 KRTAP2-1Q9BYU5 128 aa3.95□□□□□ -1.78
SMPD4-209ENST00000439886 KRTAP12-4P60329 112 aa3.93□□□□□ -1.78
SMPD4-209ENST00000439886 LOC100996750A0A140TA64 210 aa3.91□□□□□ -1.78
SMPD4-209ENST00000439886 KRTAP19-7Q3SYF9 63 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms