RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 A6NN06 94 aa3.56□□□□□ -1.84
VPS50-204ENST00000438395 CSAG1Q6PB30 78 aa3.56□□□□□ -1.84
VPS50-204ENST00000438395 S4R3F8 94 aa3.56□□□□□ -1.84
VPS50-204ENST00000438395 A0A1W2PPM0 123 aa3.55□□□□□ -1.84
VPS50-204ENST00000438395 Q5VV11 94 aa3.55□□□□□ -1.84
VPS50-204ENST00000438395 UBL5Q9BZL1 73 aa3.55□□□□□ -1.84
VPS50-204ENST00000438395 PCP4P48539 62 aa3.54□□□□□ -1.84
VPS50-204ENST00000438395 NEBP20929 6669 aa3.53□□□□□ -1.84
VPS50-204ENST00000438395 KRTAP10-5P60370 271 aa3.53□□□□□ -1.84
VPS50-204ENST00000438395 C1orf64Q8NEQ6 169 aa3.53□□□□□ -1.84
VPS50-204ENST00000438395 SPCS1Q9Y6A9 102 aa3.51□□□□□ -1.85
VPS50-204ENST00000438395 LCA10Q71F78 164 aa3.5□□□□□ -1.85
VPS50-204ENST00000438395 IMUPQ9GZP8 106 aa3.5□□□□□ -1.85
VPS50-204ENST00000438395 TAX1BP3O14907 124 aa3.49□□□□□ -1.85
VPS50-204ENST00000438395 TP53AIP1Q9HCN2 124 aa3.49□□□□□ -1.85
VPS50-204ENST00000438395 SPRR2GQ9BYE4 73 aa3.48□□□□□ -1.85
VPS50-204ENST00000438395 MT1BP07438 61 aa3.47□□□□□ -1.85
VPS50-204ENST00000438395 KLKP1Q107X0 134 aa3.47□□□□□ -1.85
VPS50-204ENST00000438395 KRTAP19-8Q3LI54 63 aa3.47□□□□□ -1.85
VPS50-204ENST00000438395 LCE1FQ5T754 118 aa3.47□□□□□ -1.85
VPS50-204ENST00000438395 MUC12Q9UKN1 5478 aa3.46□□□□□ -1.86
VPS50-204ENST00000438395 KRTAP10-12P60413 245 aa3.44□□□□□ -1.86
VPS50-204ENST00000438395 CRIPTQ9P021 101 aa3.44□□□□□ -1.86
VPS50-204ENST00000438395 KRTAP20-1Q3LI63 56 aa3.43□□□□□ -1.86
VPS50-204ENST00000438395 COL5A1-AS1Q5SY13 56 aa3.42□□□□□ -1.86
VPS50-204ENST00000438395 KMT2DO14686 5537 aa3.41□□□□□ -1.86
VPS50-204ENST00000438395 TRAV22A0A0B4J277 110 aa3.41□□□□□ -1.86
VPS50-204ENST00000438395 LOC101927531A0A1B0GV80 90 aa3.41□□□□□ -1.86
VPS50-204ENST00000438395 MDN1Q9NU22 5596 aa3.4□□□□□ -1.87
VPS50-204ENST00000438395 K7EP34 96 aa3.4□□□□□ -1.87
VPS50-204ENST00000438395 NDUFC1O43677 76 aa3.4□□□□□ -1.87
VPS50-204ENST00000438395 CYP4F30PQ9H0H9 118 aa3.4□□□□□ -1.87
VPS50-204ENST00000438395 GTF2H5Q6ZYL4 71 aa3.39□□□□□ -1.87
VPS50-204ENST00000438395 PRO0461Q9UI25 63 aa3.39□□□□□ -1.87
VPS50-204ENST00000438395 KRTAP5-1Q6L8H4 278 aa3.38□□□□□ -1.87
VPS50-204ENST00000438395 KRTAP5-9P26371 169 aa3.37□□□□□ -1.87
VPS50-204ENST00000438395 SVIPQ8NHG7 77 aa3.37□□□□□ -1.87
VPS50-204ENST00000438395 KRTAP9-6A8MVA2 160 aa3.36□□□□□ -1.87
VPS50-204ENST00000438395 ATOX1O00244 68 aa3.36□□□□□ -1.87
VPS50-204ENST00000438395 PRO2289Q9P1D8 64 aa3.36□□□□□ -1.87
VPS50-204ENST00000438395 ACYP1P07311 99 aa3.35□□□□□ -1.87
VPS50-204ENST00000438395 A0A087WVE0 104 aa3.34□□□□□ -1.87
VPS50-204ENST00000438395 A8MUN3 132 aa3.34□□□□□ -1.87
VPS50-204ENST00000438395 F8W1H4 67 aa3.34□□□□□ -1.87
VPS50-204ENST00000438395 ETDBQ3ZM63 59 aa3.34□□□□□ -1.87
VPS50-204ENST00000438395 H0Y9P7 68 aa3.33□□□□□ -1.88
VPS50-204ENST00000438395 H0YAA0 97 aa3.33□□□□□ -1.88
VPS50-204ENST00000438395 UQCRQO14949 82 aa3.33□□□□□ -1.88
VPS50-204ENST00000438395 HIST1H4AP62805 103 aaKnown RBP3.33□□□□□ -1.88
VPS50-204ENST00000438395 ATP5EP2Q5VTU8 51 aa3.33□□□□□ -1.88
VPS50-204ENST00000438395 LOC105371267A0A1B0GV96 52 aa3.32□□□□□ -1.88
VPS50-204ENST00000438395 ADM2Q7Z4H4 148 aa3.32□□□□□ -1.88
VPS50-204ENST00000438395 PLAC4Q8WY50 150 aa3.32□□□□□ -1.88
VPS50-204ENST00000438395 SPRR2FQ96RM1 72 aa3.31□□□□□ -1.88
VPS50-204ENST00000438395 LCE3CQ5T5A8 94 aa3.3□□□□□ -1.88
VPS50-204ENST00000438395 C20orf197Q8N268 126 aa3.3□□□□□ -1.88
VPS50-204ENST00000438395 KRTAP2-3P0C7H8 128 aa3.29□□□□□ -1.88
VPS50-204ENST00000438395 SPRR2EP22531 72 aa3.29□□□□□ -1.88
VPS50-204ENST00000438395 SPRR2BP35325 72 aa3.29□□□□□ -1.88
VPS50-204ENST00000438395 SPRR2AP35326 72 aa3.29□□□□□ -1.88
VPS50-204ENST00000438395 KRTAP2-4Q9BYR9 128 aa3.29□□□□□ -1.88
VPS50-204ENST00000438395 R4GN34 69 aa3.29□□□□□ -1.88
VPS50-204ENST00000438395 FAM240AA0A1B0GVK7 77 aa3.27□□□□□ -1.89
VPS50-204ENST00000438395 MP68P56378 58 aa3.27□□□□□ -1.89
VPS50-204ENST00000438395 KRTAP8-1Q8IUC2 63 aa3.27□□□□□ -1.89
VPS50-204ENST00000438395 LINC00208Q96KT6 92 aa3.26□□□□□ -1.89
VPS50-204ENST00000438395 M0QZ58 72 aa3.24□□□□□ -1.89
VPS50-204ENST00000438395 MT1XP80297 61 aa3.24□□□□□ -1.89
VPS50-204ENST00000438395 KRTAP4-4Q9BYR3 166 aa3.24□□□□□ -1.89
VPS50-204ENST00000438395 PCP4L1A6NKN8 68 aa3.23□□□□□ -1.89
VPS50-204ENST00000438395 LINC01554Q52M75 96 aa3.23□□□□□ -1.89
VPS50-204ENST00000438395 LINC00643Q86TS7 51 aa3.21□□□□□ -1.9
VPS50-204ENST00000438395 P0C880 135 aa3.2□□□□□ -1.9
VPS50-204ENST00000438395 KRTAP12-2P59991 146 aa3.2□□□□□ -1.9
VPS50-204ENST00000438395 KRTAP5-4Q6L8H1 288 aa3.2□□□□□ -1.9
VPS50-204ENST00000438395 SPRR2DP22532 72 aa3.19□□□□□ -1.9
VPS50-204ENST00000438395 H3BPC8 53 aa3.17□□□□□ -1.9
VPS50-204ENST00000438395 KRTAP2-1Q9BYU5 128 aa3.17□□□□□ -1.9
VPS50-204ENST00000438395 OCR1Q9BZK8 76 aa3.17□□□□□ -1.9
VPS50-204ENST00000438395 MT-ATP8P03928 68 aa3.16□□□□□ -1.9
VPS50-204ENST00000438395 SCGB1A1P11684 91 aa3.16□□□□□ -1.9
VPS50-204ENST00000438395 DMAC1Q96GE9 116 aa3.16□□□□□ -1.9
VPS50-204ENST00000438395 SPTSSBQ8NFR3 76 aa3.13□□□□□ -1.91
VPS50-204ENST00000438395 TRAV7A0A075B6U4 112 aa3.11□□□□□ -1.91
VPS50-204ENST00000438395 J3QR89 54 aa3.1□□□□□ -1.91
VPS50-204ENST00000438395 CHKB-CPT1BH3BT56 60 aa3.09□□□□□ -1.91
VPS50-204ENST00000438395 ACYP2P14621 99 aa3.09□□□□□ -1.91
VPS50-204ENST00000438395 CAMK2N1Q7Z7J9 78 aa3.03□□□□□ -1.92
VPS50-204ENST00000438395 GPR98Q8WXG9 6306 aa3.03□□□□□ -1.93
VPS50-204ENST00000438395 LCE3EQ5T5B0 92 aa3.02□□□□□ -1.93
VPS50-204ENST00000438395 SMIM20Q8N5G0 67 aa3.02□□□□□ -1.93
VPS50-204ENST00000438395 OBSCNQ5VST9 7968 aa3.02□□□□□ -1.93
VPS50-204ENST00000438395 A0A1B0GV90 55 aa3□□□□□ -1.93
VPS50-204ENST00000438395 NDUFAF8A1L188 74 aa3□□□□□ -1.93
VPS50-204ENST00000438395 PRAC1Q96KF2 57 aa2.98□□□□□ -1.93
VPS50-204ENST00000438395 SNURFQ9Y675 71 aa2.94□□□□□ -1.94
VPS50-204ENST00000438395 SEC61GP60059 68 aa2.92□□□□□ -1.94
VPS50-204ENST00000438395 SPANXA2-OT1Q8N9U9 137 aa2.92□□□□□ -1.94
VPS50-204ENST00000438395 DSTQ03001 7570 aaKnown RBP2.92□□□□□ -1.94
VPS50-204ENST00000438395 KRTAP13-4Q3LI77 160 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms