RNA–Protein interactions for RNA: ENST00000438169.6

KRR1-202, Transcript of KRR1, small subunit processome component homolog, humanhuman

TSL 1 (best) BASIC

Gene KRR1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-202ENST00000438169 KRTAP10-10P60014 251 aa1.71□□□□□ -2.14
KRR1-202ENST00000438169 FLNAP21333 2647 aaKnown RBP1.71□□□□□ -2.14
KRR1-202ENST00000438169 BOD1L1Q8NFC6 3051 aa1.71□□□□□ -2.14
KRR1-202ENST00000438169 MTORP42345 2549 aa1.71□□□□□ -2.14
KRR1-202ENST00000438169 CRYBG3Q68DQ2 2970 aa1.7□□□□□ -2.14
KRR1-202ENST00000438169 LOC400499M0QZD8 3231 aa1.7□□□□□ -2.14
KRR1-202ENST00000438169 TRIOO75962 3097 aa1.7□□□□□ -2.14
KRR1-202ENST00000438169 TENM4Q6N022 2769 aa1.7□□□□□ -2.14
KRR1-202ENST00000438169 FCGBPQ9Y6R7 5405 aaPredicted RBP1.68□□□□□ -2.14
KRR1-202ENST00000438169 KMT2CQ8NEZ4 4911 aaKnown RBP1.68□□□□□ -2.14
KRR1-202ENST00000438169 RYR2Q92736 4967 aa1.68□□□□□ -2.14
KRR1-202ENST00000438169 AKAP13Q12802 2813 aa1.68□□□□□ -2.14
KRR1-202ENST00000438169 DMXL1Q9Y485 3027 aa1.68□□□□□ -2.14
KRR1-202ENST00000438169 WDFY3Q8IZQ1 3526 aa1.67□□□□□ -2.14
KRR1-202ENST00000438169 MEGF8Q7Z7M0 2845 aa1.67□□□□□ -2.14
KRR1-202ENST00000438169 PKD1L1Q8TDX9 2849 aa1.67□□□□□ -2.14
KRR1-202ENST00000438169 CHD9Q3L8U1 2897 aa1.67□□□□□ -2.14
KRR1-202ENST00000438169 FREM2Q5SZK8 3169 aa1.67□□□□□ -2.14
KRR1-202ENST00000438169 U3KQA8 63 aa1.67□□□□□ -2.14
KRR1-202ENST00000438169 CEP295Q9C0D2 2601 aa1.67□□□□□ -2.14
KRR1-202ENST00000438169 COL12A1Q99715 3063 aa1.64□□□□□ -2.15
KRR1-202ENST00000438169 SPENQ96T58 3664 aaKnown RBP1.64□□□□□ -2.15
KRR1-202ENST00000438169 VPS13DQ5THJ4 4388 aa1.64□□□□□ -2.15
KRR1-202ENST00000438169 RPS29P62273 56 aaKnown RBP1.63□□□□□ -2.15
KRR1-202ENST00000438169 NF1P21359 2839 aa1.62□□□□□ -2.15
KRR1-202ENST00000438169 LAMA5O15230 3695 aa1.62□□□□□ -2.15
KRR1-202ENST00000438169 MUC2Q02817 5179 aa1.62□□□□□ -2.15
KRR1-202ENST00000438169 TLN2Q9Y4G6 2542 aa1.62□□□□□ -2.15
KRR1-202ENST00000438169 TNP1P09430 55 aa1.62□□□□□ -2.15
KRR1-202ENST00000438169 HERC2O95714 4834 aa1.61□□□□□ -2.15
KRR1-202ENST00000438169 HIVEP3Q5T1R4 2406 aa1.61□□□□□ -2.15
KRR1-202ENST00000438169 LAMA1P25391 3075 aa1.61□□□□□ -2.15
KRR1-202ENST00000438169 PDZD2O15018 2839 aa1.61□□□□□ -2.15
KRR1-202ENST00000438169 UTP20O75691 2785 aaKnown RBP1.6□□□□□ -2.15
KRR1-202ENST00000438169 HTN3P15516 51 aa1.6□□□□□ -2.15
KRR1-202ENST00000438169 SONP18583 2426 aaKnown RBP1.6□□□□□ -2.15
KRR1-202ENST00000438169 BSNQ9UPA5 3926 aa1.59□□□□□ -2.15
KRR1-202ENST00000438169 DMBT1Q9UGM3 2413 aaPredicted RBP1.59□□□□□ -2.15
KRR1-202ENST00000438169 USP9YO00507 2555 aaPredicted RBP1.58□□□□□ -2.16
KRR1-202ENST00000438169 ATMQ13315 3056 aa1.58□□□□□ -2.16
KRR1-202ENST00000438169 C9orf92A6NGG3 77 aa1.58□□□□□ -2.16
KRR1-202ENST00000438169 DEFB135Q30KP9 77 aa1.58□□□□□ -2.16
KRR1-202ENST00000438169 CENPEQ02224 2701 aa1.58□□□□□ -2.16
KRR1-202ENST00000438169 APCP25054 2843 aa1.58□□□□□ -2.16
KRR1-202ENST00000438169 ABCA13Q86UQ4 5058 aa1.57□□□□□ -2.16
KRR1-202ENST00000438169 DCHS2Q6V1P9 2916 aa1.57□□□□□ -2.16
KRR1-202ENST00000438169 DMXL2Q8TDJ6 3036 aa1.55□□□□□ -2.16
KRR1-202ENST00000438169 DNAH11Q96DT5 4516 aa1.55□□□□□ -2.16
KRR1-202ENST00000438169 TENM1Q9UKZ4 2725 aa1.55□□□□□ -2.16
KRR1-202ENST00000438169 MGAM2Q2M2H8 2515 aa1.54□□□□□ -2.16
KRR1-202ENST00000438169 FRAS1Q86XX4 4008 aa1.53□□□□□ -2.16
KRR1-202ENST00000438169 COL7A1Q02388 2944 aa1.53□□□□□ -2.16
KRR1-202ENST00000438169 NIPBLQ6KC79 2804 aaeCLIP1.53□□□□□ -2.16
KRR1-202ENST00000438169 CSMD2Q7Z408 3487 aa1.53□□□□□ -2.16
KRR1-202ENST00000438169 HERC1Q15751 4861 aa1.53□□□□□ -2.16
KRR1-202ENST00000438169 LYSTQ99698 3801 aa1.53□□□□□ -2.17
KRR1-202ENST00000438169 ITPR2Q14571 2701 aa1.53□□□□□ -2.17
KRR1-202ENST00000438169 ADGRG4Q8IZF6 3080 aa1.52□□□□□ -2.17
KRR1-202ENST00000438169 ZANQ9Y493 2812 aa1.52□□□□□ -2.17
KRR1-202ENST00000438169 TGP01266 2768 aa1.52□□□□□ -2.17
KRR1-202ENST00000438169 HIVEP1P15822 2718 aa1.52□□□□□ -2.17
KRR1-202ENST00000438169 TACC2O95359 2948 aa1.51□□□□□ -2.17
KRR1-202ENST00000438169 CUBNO60494 3623 aa1.51□□□□□ -2.17
KRR1-202ENST00000438169 FSIP2Q5CZC0 6907 aa1.51□□□□□ -2.17
KRR1-202ENST00000438169 ACANP16112 2415 aa1.5□□□□□ -2.17
KRR1-202ENST00000438169 DNAH3Q8TD57 4116 aa1.5□□□□□ -2.17
KRR1-202ENST00000438169 DEFB4AO15263 64 aa1.49□□□□□ -2.17
KRR1-202ENST00000438169 KRTAP6-3Q3LI67 103 aa1.49□□□□□ -2.17
KRR1-202ENST00000438169 TRRAPQ9Y4A5 3859 aa1.48□□□□□ -2.17
KRR1-202ENST00000438169 KRTAP12-4P60329 112 aa1.48□□□□□ -2.17
KRR1-202ENST00000438169 VPS13BQ7Z7G8 4022 aa1.47□□□□□ -2.17
KRR1-202ENST00000438169 GPR98Q8WXG9 6306 aa1.46□□□□□ -2.18
KRR1-202ENST00000438169 DNAH7Q8WXX0 4024 aa1.46□□□□□ -2.18
KRR1-202ENST00000438169 PRKDCP78527 4128 aaKnown RBP1.46□□□□□ -2.18
KRR1-202ENST00000438169 M0R2T5 61 aa1.45□□□□□ -2.18
KRR1-202ENST00000438169 DNAH8Q96JB1 4490 aa1.45□□□□□ -2.18
KRR1-202ENST00000438169 SACSQ9NZJ4 4579 aa1.45□□□□□ -2.18
KRR1-202ENST00000438169 CMYA5Q8N3K9 4069 aa1.45□□□□□ -2.18
KRR1-202ENST00000438169 VPS13CQ709C8 3753 aa1.44□□□□□ -2.18
KRR1-202ENST00000438169 FLGP20930 4061 aaPredicted RBP1.44□□□□□ -2.18
KRR1-202ENST00000438169 FAT4Q6V0I7 4981 aa1.44□□□□□ -2.18
KRR1-202ENST00000438169 ANK2Q01484 3957 aa1.43□□□□□ -2.18
KRR1-202ENST00000438169 KMT2AQ03164 3969 aa1.43□□□□□ -2.18
KRR1-202ENST00000438169 HRNRQ86YZ3 2850 aaPredicted RBP1.43□□□□□ -2.18
KRR1-202ENST00000438169 TENM3Q9P273 2699 aa1.43□□□□□ -2.18
KRR1-202ENST00000438169 CSMD3Q7Z407 3707 aa1.43□□□□□ -2.18
KRR1-202ENST00000438169 SVEP1Q4LDE5 3571 aa1.43□□□□□ -2.18
KRR1-202ENST00000438169 SMR3AQ99954 134 aa1.42□□□□□ -2.18
KRR1-202ENST00000438169 DYNC2H1Q8NCM8 4307 aaKnown RBP1.42□□□□□ -2.18
KRR1-202ENST00000438169 MYCBP2O75592 4640 aa1.41□□□□□ -2.18
KRR1-202ENST00000438169 NEBP20929 6669 aa1.41□□□□□ -2.18
KRR1-202ENST00000438169 DNAH2Q9P225 4427 aa1.41□□□□□ -2.18
KRR1-202ENST00000438169 HECTD4Q9Y4D8 3996 aa1.4□□□□□ -2.18
KRR1-202ENST00000438169 DNAH1Q9P2D7 4330 aa1.4□□□□□ -2.19
KRR1-202ENST00000438169 ZNF469Q96JG9 3925 aaPredicted RBP1.4□□□□□ -2.19
KRR1-202ENST00000438169 MXRA5Q9NR99 2828 aa1.39□□□□□ -2.19
KRR1-202ENST00000438169 SYNE2Q8WXH0 6885 aaKnown RBP1.39□□□□□ -2.19
KRR1-202ENST00000438169 NSD1Q96L73 2696 aaPredicted RBP1.39□□□□□ -2.19
KRR1-202ENST00000438169 DNAH6Q9C0G6 4158 aa1.39□□□□□ -2.19
KRR1-202ENST00000438169 RNF213Q63HN8 5207 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms