RNA–Protein interactions for RNA: ENST00000438023.5

KDM4C-206, Transcript of lysine demethylase 4C, humanhuman

TSL 5

Gene KDM4C, Length 4,022 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4C-206ENST00000438023 CMYA5Q8N3K9 4069 aa6.57□□□□□ -1.36
KDM4C-206ENST00000438023 DNAH3Q8TD57 4116 aa6.55□□□□□ -1.36
KDM4C-206ENST00000438023 DNAH11Q96DT5 4516 aa6.53□□□□□ -1.36
KDM4C-206ENST00000438023 STARD9Q9P2P6 4700 aa6.49□□□□□ -1.37
KDM4C-206ENST00000438023 KRTAP3-2Q9BYR7 98 aa6.49□□□□□ -1.37
KDM4C-206ENST00000438023 VPS13DQ5THJ4 4388 aa6.49□□□□□ -1.37
KDM4C-206ENST00000438023 LRP1BQ9NZR2 4599 aa6.46□□□□□ -1.38
KDM4C-206ENST00000438023 KRTAP3-3Q9BYR6 98 aa6.46□□□□□ -1.38
KDM4C-206ENST00000438023 DNAH2Q9P225 4427 aa6.46□□□□□ -1.38
KDM4C-206ENST00000438023 HECTD4Q9Y4D8 3996 aa6.45□□□□□ -1.38
KDM4C-206ENST00000438023 KMT2AQ03164 3969 aa6.45□□□□□ -1.38
KDM4C-206ENST00000438023 A0A1B0GVY2 172 aa6.44□□□□□ -1.38
KDM4C-206ENST00000438023 DNAH6Q9C0G6 4158 aa6.35□□□□□ -1.39
KDM4C-206ENST00000438023 PRO2289Q9P1D8 64 aa6.35□□□□□ -1.39
KDM4C-206ENST00000438023 DYNC2H1Q8NCM8 4307 aaKnown RBP6.32□□□□□ -1.4
KDM4C-206ENST00000438023 DNAH5Q8TE73 4624 aa6.28□□□□□ -1.4
KDM4C-206ENST00000438023 VPS13BQ7Z7G8 4022 aa6.28□□□□□ -1.4
KDM4C-206ENST00000438023 INE1O15225 51 aa6.24□□□□□ -1.41
KDM4C-206ENST00000438023 PRKDCP78527 4128 aaKnown RBP6.22□□□□□ -1.41
KDM4C-206ENST00000438023 FAT1Q14517 4588 aa6.15□□□□□ -1.42
KDM4C-206ENST00000438023 KRTAP10-4P60372 401 aaPredicted RBP6.12□□□□□ -1.43
KDM4C-206ENST00000438023 SACSQ9NZJ4 4579 aa6.09□□□□□ -1.44
KDM4C-206ENST00000438023 KRTAP10-10P60014 251 aa6.06□□□□□ -1.44
KDM4C-206ENST00000438023 FAT2Q9NYQ8 4349 aa6.03□□□□□ -1.44
KDM4C-206ENST00000438023 MYCBP2O75592 4640 aa6.02□□□□□ -1.45
KDM4C-206ENST00000438023 DYNC1H1Q14204 4646 aaKnown RBP6.02□□□□□ -1.45
KDM4C-206ENST00000438023 DNHD1Q96M86 4753 aa6.02□□□□□ -1.45
KDM4C-206ENST00000438023 HYDINQ4G0P3 5121 aa5.96□□□□□ -1.45
KDM4C-206ENST00000438023 APOBP04114 4563 aaKnown RBP5.94□□□□□ -1.46
KDM4C-206ENST00000438023 LORP23490 312 aaPredicted RBP5.94□□□□□ -1.46
KDM4C-206ENST00000438023 PKHD1P08F94 4074 aa5.91□□□□□ -1.46
KDM4C-206ENST00000438023 PKD1P98161 4303 aa5.91□□□□□ -1.46
KDM4C-206ENST00000438023 LRP1Q07954 4544 aaKnown RBP5.85□□□□□ -1.47
KDM4C-206ENST00000438023 FAT3Q8TDW7 4589 aa5.81□□□□□ -1.48
KDM4C-206ENST00000438023 HSPG2P98160 4391 aa5.78□□□□□ -1.48
KDM4C-206ENST00000438023 MT1HL1P0DM35 61 aa5.78□□□□□ -1.48
KDM4C-206ENST00000438023 LCE3AQ5TA76 89 aa5.75□□□□□ -1.49
KDM4C-206ENST00000438023 KRTAP23-1A1A580 65 aa5.74□□□□□ -1.49
KDM4C-206ENST00000438023 PKHD1L1Q86WI1 4243 aa5.73□□□□□ -1.49
KDM4C-206ENST00000438023 KRTAP12-3P60328 96 aa5.69□□□□□ -1.5
KDM4C-206ENST00000438023 LRP2P98164 4655 aa5.65□□□□□ -1.5
KDM4C-206ENST00000438023 KRTAP10-12P60413 245 aa5.63□□□□□ -1.51
KDM4C-206ENST00000438023 KMT2CQ8NEZ4 4911 aaKnown RBP5.57□□□□□ -1.52
KDM4C-206ENST00000438023 LPAP08519 4548 aa5.57□□□□□ -1.52
KDM4C-206ENST00000438023 TNXBP22105 4242 aa5.52□□□□□ -1.53
KDM4C-206ENST00000438023 RYR1P21817 5038 aa5.49□□□□□ -1.53
KDM4C-206ENST00000438023 KRTAP4-1Q9BYQ7 146 aa5.48□□□□□ -1.53
KDM4C-206ENST00000438023 KIAA1109Q2LD37 5005 aa5.46□□□□□ -1.54
KDM4C-206ENST00000438023 KRTAP17-1Q9BYP8 105 aa5.45□□□□□ -1.54
KDM4C-206ENST00000438023 CRCT1Q9UGL9 99 aa5.41□□□□□ -1.54
KDM4C-206ENST00000438023 SPRR5A0A1B0GTR4 108 aa5.4□□□□□ -1.54
KDM4C-206ENST00000438023 RYR2Q92736 4967 aa5.37□□□□□ -1.55
KDM4C-206ENST00000438023 KRTAP4-5Q9BYR2 181 aa5.36□□□□□ -1.55
KDM4C-206ENST00000438023 RYR3Q15413 4870 aa5.34□□□□□ -1.55
KDM4C-206ENST00000438023 KRTAP10-5P60370 271 aa5.3□□□□□ -1.56
KDM4C-206ENST00000438023 MUC2Q02817 5179 aa5.26□□□□□ -1.57
KDM4C-206ENST00000438023 ABCA13Q86UQ4 5058 aa5.24□□□□□ -1.57
KDM4C-206ENST00000438023 KRTAP8-1Q8IUC2 63 aa5.21□□□□□ -1.57
KDM4C-206ENST00000438023 EPPK1P58107 5090 aaKnown RBP5.21□□□□□ -1.58
KDM4C-206ENST00000438023 KRTAP19-2Q3LHN2 52 aa5.12□□□□□ -1.59
KDM4C-206ENST00000438023 SPRR2GQ9BYE4 73 aa5.11□□□□□ -1.59
KDM4C-206ENST00000438023 BIRC6Q9NR09 4857 aa5.08□□□□□ -1.6
KDM4C-206ENST00000438023 MUC17Q685J3 4493 aa5.06□□□□□ -1.6
KDM4C-206ENST00000438023 KRTAP19-1Q8IUB9 90 aa5.05□□□□□ -1.6
KDM4C-206ENST00000438023 LCE3CQ5T5A8 94 aa5.04□□□□□ -1.6
KDM4C-206ENST00000438023 KRTAP19-5Q3LI72 72 aa5□□□□□ -1.61
KDM4C-206ENST00000438023 SYNE1Q8NF91 8797 aaKnown RBP4.97□□□□□ -1.61
KDM4C-206ENST00000438023 FLGP20930 4061 aaPredicted RBP4.95□□□□□ -1.62
KDM4C-206ENST00000438023 FAT4Q6V0I7 4981 aa4.94□□□□□ -1.62
KDM4C-206ENST00000438023 MT2AP02795 61 aa4.91□□□□□ -1.62
KDM4C-206ENST00000438023 MT1FP04733 61 aa4.91□□□□□ -1.62
KDM4C-206ENST00000438023 HERC2O95714 4834 aa4.88□□□□□ -1.63
KDM4C-206ENST00000438023 KRTAP12-4P60329 112 aa4.88□□□□□ -1.63
KDM4C-206ENST00000438023 HERC1Q15751 4861 aa4.86□□□□□ -1.63
KDM4C-206ENST00000438023 KRTAP10-7P60409 375 aaPredicted RBP4.86□□□□□ -1.63
KDM4C-206ENST00000438023 MT1HP80294 61 aa4.84□□□□□ -1.63
KDM4C-206ENST00000438023 PCLOQ9Y6V0 5065 aa4.81□□□□□ -1.64
KDM4C-206ENST00000438023 RNF213Q63HN8 5207 aa4.81□□□□□ -1.64
KDM4C-206ENST00000438023 MT1XP80297 61 aa4.81□□□□□ -1.64
KDM4C-206ENST00000438023 LCE2CQ5TA81 110 aa4.8□□□□□ -1.64
KDM4C-206ENST00000438023 KRTAP19-8Q3LI54 63 aa4.76□□□□□ -1.65
KDM4C-206ENST00000438023 MT1BP07438 61 aa4.73□□□□□ -1.65
KDM4C-206ENST00000438023 HMCN2Q8NDA2 5059 aa4.69□□□□□ -1.66
KDM4C-206ENST00000438023 KRTAP9-8Q9BYQ0 159 aa4.67□□□□□ -1.66
KDM4C-206ENST00000438023 OBSCNQ5VST9 7968 aa4.66□□□□□ -1.66
KDM4C-206ENST00000438023 UBR4Q5T4S7 5183 aa4.58□□□□□ -1.68
KDM4C-206ENST00000438023 KRTAP4-8A0A0G2JLE6 195 aa4.58□□□□□ -1.68
KDM4C-206ENST00000438023 LCE3BQ5TA77 95 aa4.58□□□□□ -1.68
KDM4C-206ENST00000438023 KRTAP4-8Q9BYQ9 185 aa4.58□□□□□ -1.68
KDM4C-206ENST00000438023 KRTAP4-7Q9BYR0 210 aa4.57□□□□□ -1.68
KDM4C-206ENST00000438023 MT1GP13640 62 aa4.51□□□□□ -1.69
KDM4C-206ENST00000438023 KRTAP19-4Q3LI73 84 aa4.49□□□□□ -1.69
KDM4C-206ENST00000438023 KRTAP9-3Q9BYQ3 159 aa4.46□□□□□ -1.7
KDM4C-206ENST00000438023 USH2AO75445 5202 aa4.45□□□□□ -1.7
KDM4C-206ENST00000438023 KMT2DO14686 5537 aa4.45□□□□□ -1.7
KDM4C-206ENST00000438023 KRTAP9-6A8MVA2 160 aa4.44□□□□□ -1.7
KDM4C-206ENST00000438023 LCE3DQ9BYE3 92 aa4.39□□□□□ -1.71
KDM4C-206ENST00000438023 KRTAP2-3P0C7H8 128 aa4.38□□□□□ -1.71
KDM4C-206ENST00000438023 KRTAP2-4Q9BYR9 128 aa4.38□□□□□ -1.71
KDM4C-206ENST00000438023 KRTAP2-1Q9BYU5 128 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms