RNA–Protein interactions for RNA: ENST00000437844.6

ZEB1-204, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 6,246 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-204ENST00000437844 KRTAP10-4P60372 401 aaPredicted RBP2.99□□□□□ -1.93
ZEB1-204ENST00000437844 DNAH6Q9C0G6 4158 aa2.98□□□□□ -1.93
ZEB1-204ENST00000437844 KRTAP10-12P60413 245 aa2.97□□□□□ -1.93
ZEB1-204ENST00000437844 KRTAP8-1Q8IUC2 63 aa2.97□□□□□ -1.93
ZEB1-204ENST00000437844 RYR2Q92736 4967 aa2.96□□□□□ -1.94
ZEB1-204ENST00000437844 DNAH10Q8IVF4 4471 aa2.96□□□□□ -1.94
ZEB1-204ENST00000437844 TRRAPQ9Y4A5 3859 aa2.96□□□□□ -1.94
ZEB1-204ENST00000437844 DNAH3Q8TD57 4116 aa2.95□□□□□ -1.94
ZEB1-204ENST00000437844 PLECQ15149 4684 aaKnown RBP2.94□□□□□ -1.94
ZEB1-204ENST00000437844 CSMD3Q7Z407 3707 aa2.94□□□□□ -1.94
ZEB1-204ENST00000437844 LRP1BQ9NZR2 4599 aa2.93□□□□□ -1.94
ZEB1-204ENST00000437844 RYR3Q15413 4870 aa2.93□□□□□ -1.94
ZEB1-204ENST00000437844 DYNC1H1Q14204 4646 aaKnown RBP2.92□□□□□ -1.94
ZEB1-204ENST00000437844 KRTAP9-6A0A140TA67 174 aa2.92□□□□□ -1.94
ZEB1-204ENST00000437844 PRKDCP78527 4128 aaKnown RBP2.91□□□□□ -1.94
ZEB1-204ENST00000437844 KRTAP10-7P60409 375 aaPredicted RBP2.91□□□□□ -1.94
ZEB1-204ENST00000437844 HERC2O95714 4834 aa2.91□□□□□ -1.94
ZEB1-204ENST00000437844 DNAH17Q9UFH2 4485 aa2.88□□□□□ -1.95
ZEB1-204ENST00000437844 SACSQ9NZJ4 4579 aa2.87□□□□□ -1.95
ZEB1-204ENST00000437844 KRTAP9-2Q9BYQ4 174 aa2.86□□□□□ -1.95
ZEB1-204ENST00000437844 RYR1P21817 5038 aa2.86□□□□□ -1.95
ZEB1-204ENST00000437844 CMYA5Q8N3K9 4069 aa2.85□□□□□ -1.95
ZEB1-204ENST00000437844 KRTAP12-1P59990 96 aa2.84□□□□□ -1.95
ZEB1-204ENST00000437844 VPS13DQ5THJ4 4388 aa2.84□□□□□ -1.95
ZEB1-204ENST00000437844 KRTAP12-3P60328 96 aa2.82□□□□□ -1.96
ZEB1-204ENST00000437844 PCLOQ9Y6V0 5065 aa2.81□□□□□ -1.96
ZEB1-204ENST00000437844 KRTAP10-5P60370 271 aa2.81□□□□□ -1.96
ZEB1-204ENST00000437844 FAT2Q9NYQ8 4349 aa2.81□□□□□ -1.96
ZEB1-204ENST00000437844 DNAH5Q8TE73 4624 aa2.8□□□□□ -1.96
ZEB1-204ENST00000437844 DNAH2Q9P225 4427 aa2.79□□□□□ -1.96
ZEB1-204ENST00000437844 LCE2DQ5TA82 110 aaPredicted RBP2.79□□□□□ -1.96
ZEB1-204ENST00000437844 COL7A1Q02388 2944 aa2.78□□□□□ -1.96
ZEB1-204ENST00000437844 LYSTQ99698 3801 aa2.78□□□□□ -1.96
ZEB1-204ENST00000437844 SPRR2FQ96RM1 72 aa2.77□□□□□ -1.97
ZEB1-204ENST00000437844 DNAH7Q8WXX0 4024 aa2.76□□□□□ -1.97
ZEB1-204ENST00000437844 PKHD1L1Q86WI1 4243 aa2.76□□□□□ -1.97
ZEB1-204ENST00000437844 INE1O15225 51 aa2.76□□□□□ -1.97
ZEB1-204ENST00000437844 STARD9Q9P2P6 4700 aa2.76□□□□□ -1.97
ZEB1-204ENST00000437844 HERC1Q15751 4861 aa2.76□□□□□ -1.97
ZEB1-204ENST00000437844 DNAH8Q96JB1 4490 aa2.7□□□□□ -1.98
ZEB1-204ENST00000437844 MT1HP80294 61 aa2.7□□□□□ -1.98
ZEB1-204ENST00000437844 KMT2AQ03164 3969 aa2.69□□□□□ -1.98
ZEB1-204ENST00000437844 EPPK1P58107 5090 aaKnown RBP2.69□□□□□ -1.98
ZEB1-204ENST00000437844 KIAA1109Q2LD37 5005 aa2.69□□□□□ -1.98
ZEB1-204ENST00000437844 KMT2CQ8NEZ4 4911 aaKnown RBP2.67□□□□□ -1.98
ZEB1-204ENST00000437844 HSPG2P98160 4391 aa2.67□□□□□ -1.98
ZEB1-204ENST00000437844 FAT1Q14517 4588 aa2.67□□□□□ -1.98
ZEB1-204ENST00000437844 VPS13BQ7Z7G8 4022 aa2.66□□□□□ -1.98
ZEB1-204ENST00000437844 HECTD4Q9Y4D8 3996 aa2.66□□□□□ -1.98
ZEB1-204ENST00000437844 APOBP04114 4563 aaKnown RBP2.65□□□□□ -1.98
ZEB1-204ENST00000437844 SPRR2EP22531 72 aa2.65□□□□□ -1.98
ZEB1-204ENST00000437844 SPRR2BP35325 72 aa2.65□□□□□ -1.98
ZEB1-204ENST00000437844 SPRR2AP35326 72 aa2.65□□□□□ -1.98
ZEB1-204ENST00000437844 KRTAP3-1Q9BYR8 98 aa2.65□□□□□ -1.98
ZEB1-204ENST00000437844 FRAS1Q86XX4 4008 aa2.64□□□□□ -1.99
ZEB1-204ENST00000437844 FAT3Q8TDW7 4589 aa2.64□□□□□ -1.99
ZEB1-204ENST00000437844 ABCA13Q86UQ4 5058 aa2.63□□□□□ -1.99
ZEB1-204ENST00000437844 KRTAP23-1A1A580 65 aa2.63□□□□□ -1.99
ZEB1-204ENST00000437844 LCE3AQ5TA76 89 aa2.62□□□□□ -1.99
ZEB1-204ENST00000437844 MYCBP2O75592 4640 aa2.61□□□□□ -1.99
ZEB1-204ENST00000437844 KRTAP9-7A8MTY7 169 aa2.61□□□□□ -1.99
ZEB1-204ENST00000437844 PKHD1P08F94 4074 aa2.61□□□□□ -1.99
ZEB1-204ENST00000437844 KRTAP12-4P60329 112 aa2.6□□□□□ -1.99
ZEB1-204ENST00000437844 SPRR2DP22532 72 aa2.59□□□□□ -1.99
ZEB1-204ENST00000437844 HYDINQ4G0P3 5121 aa2.59□□□□□ -2
ZEB1-204ENST00000437844 LCE2AQ5TA79 106 aaPredicted RBP2.58□□□□□ -2
ZEB1-204ENST00000437844 KRTAP4-1Q9BYQ7 146 aa2.54□□□□□ -2
ZEB1-204ENST00000437844 SPRR5A0A1B0GTR4 108 aa2.54□□□□□ -2
ZEB1-204ENST00000437844 KRTAP19-4Q3LI73 84 aa2.53□□□□□ -2
ZEB1-204ENST00000437844 LCE2BO14633 110 aa2.53□□□□□ -2.01
ZEB1-204ENST00000437844 LCE2CQ5TA81 110 aa2.53□□□□□ -2.01
ZEB1-204ENST00000437844 MT2AP02795 61 aa2.51□□□□□ -2.01
ZEB1-204ENST00000437844 MUC17Q685J3 4493 aa2.5□□□□□ -2.01
ZEB1-204ENST00000437844 KRTAP20-1Q3LI63 56 aa2.5□□□□□ -2.01
ZEB1-204ENST00000437844 KRTAP19-1Q8IUB9 90 aa2.49□□□□□ -2.01
ZEB1-204ENST00000437844 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.49□□□□□ -2.01
ZEB1-204ENST00000437844 PKD1P98161 4303 aa2.49□□□□□ -2.01
ZEB1-204ENST00000437844 KRTAP6-3Q3LI67 103 aa2.46□□□□□ -2.02
ZEB1-204ENST00000437844 KRTAP3-2Q9BYR7 98 aa2.46□□□□□ -2.02
ZEB1-204ENST00000437844 KRTAP3-3Q9BYR6 98 aa2.44□□□□□ -2.02
ZEB1-204ENST00000437844 SYNE1Q8NF91 8797 aaKnown RBP2.43□□□□□ -2.02
ZEB1-204ENST00000437844 MT1FP04733 61 aa2.42□□□□□ -2.02
ZEB1-204ENST00000437844 HMCN2Q8NDA2 5059 aa2.41□□□□□ -2.02
ZEB1-204ENST00000437844 GPR98Q8WXG9 6306 aa2.4□□□□□ -2.02
ZEB1-204ENST00000437844 RNF213Q63HN8 5207 aa2.4□□□□□ -2.03
ZEB1-204ENST00000437844 KRTAP19-6Q3LI70 58 aa2.39□□□□□ -2.03
ZEB1-204ENST00000437844 SPRR2GQ9BYE4 73 aa2.39□□□□□ -2.03
ZEB1-204ENST00000437844 KRTAP19-5Q3LI72 72 aa2.38□□□□□ -2.03
ZEB1-204ENST00000437844 TNXBP22105 4242 aa2.37□□□□□ -2.03
ZEB1-204ENST00000437844 KRTAP2-3P0C7H8 128 aa2.37□□□□□ -2.03
ZEB1-204ENST00000437844 KRTAP2-4Q9BYR9 128 aa2.37□□□□□ -2.03
ZEB1-204ENST00000437844 KRTAP9-8Q9BYQ0 159 aa2.36□□□□□ -2.03
ZEB1-204ENST00000437844 KRTAP9-3Q9BYQ3 159 aa2.34□□□□□ -2.03
ZEB1-204ENST00000437844 LRP2P98164 4655 aa2.33□□□□□ -2.04
ZEB1-204ENST00000437844 LCE3CQ5T5A8 94 aa2.32□□□□□ -2.04
ZEB1-204ENST00000437844 MT1GP13640 62 aa2.31□□□□□ -2.04
ZEB1-204ENST00000437844 LCE3BQ5TA77 95 aa2.31□□□□□ -2.04
ZEB1-204ENST00000437844 FAT4Q6V0I7 4981 aa2.3□□□□□ -2.04
ZEB1-204ENST00000437844 LRP1Q07954 4544 aaKnown RBP2.3□□□□□ -2.04
ZEB1-204ENST00000437844 KRTAP19-2Q3LHN2 52 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 191.6 ms