RNA–Protein interactions for RNA: ENST00000435777.2

COL22A1-203, Transcript of collagen type XXII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene COL22A1, Length 4,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1-203ENST00000435777 MT1HL1P0DM35 61 aa6.14□□□□□ -1.43
COL22A1-203ENST00000435777 KRTAP12-1P59990 96 aa6.14□□□□□ -1.43
COL22A1-203ENST00000435777 KMT2AQ03164 3969 aa6.14□□□□□ -1.43
COL22A1-203ENST00000435777 DNAH2Q9P225 4427 aa6.13□□□□□ -1.43
COL22A1-203ENST00000435777 TNP1P09430 55 aa6.13□□□□□ -1.43
COL22A1-203ENST00000435777 LYSTQ99698 3801 aa6.13□□□□□ -1.43
COL22A1-203ENST00000435777 FAT1Q14517 4588 aa6.12□□□□□ -1.43
COL22A1-203ENST00000435777 KRTAP3-3Q9BYR6 98 aa6.12□□□□□ -1.43
COL22A1-203ENST00000435777 DNAH3Q8TD57 4116 aa6.12□□□□□ -1.43
COL22A1-203ENST00000435777 CMYA5Q8N3K9 4069 aa6.08□□□□□ -1.44
COL22A1-203ENST00000435777 KRTAP3-2Q9BYR7 98 aa6.08□□□□□ -1.44
COL22A1-203ENST00000435777 ALMS1Q8TCU4 4167 aa6.06□□□□□ -1.44
COL22A1-203ENST00000435777 DYNC1H1Q14204 4646 aaKnown RBP6.05□□□□□ -1.44
COL22A1-203ENST00000435777 PP632Q6XCG6 107 aa6.02□□□□□ -1.45
COL22A1-203ENST00000435777 DNAH7Q8WXX0 4024 aa5.98□□□□□ -1.45
COL22A1-203ENST00000435777 FRAS1Q86XX4 4008 aa5.97□□□□□ -1.45
COL22A1-203ENST00000435777 KRTAP4-5Q9BYR2 181 aa5.96□□□□□ -1.46
COL22A1-203ENST00000435777 DYNC2H1Q8NCM8 4307 aaKnown RBP5.95□□□□□ -1.46
COL22A1-203ENST00000435777 VPS13BQ7Z7G8 4022 aa5.92□□□□□ -1.46
COL22A1-203ENST00000435777 KRTAP10-10P60014 251 aa5.92□□□□□ -1.46
COL22A1-203ENST00000435777 DNAH6Q9C0G6 4158 aa5.91□□□□□ -1.46
COL22A1-203ENST00000435777 HECTD4Q9Y4D8 3996 aa5.9□□□□□ -1.47
COL22A1-203ENST00000435777 SACSQ9NZJ4 4579 aa5.87□□□□□ -1.47
COL22A1-203ENST00000435777 MYCBP2O75592 4640 aa5.86□□□□□ -1.47
COL22A1-203ENST00000435777 FAT2Q9NYQ8 4349 aa5.81□□□□□ -1.48
COL22A1-203ENST00000435777 RYR1P21817 5038 aa5.8□□□□□ -1.48
COL22A1-203ENST00000435777 KIAA1109Q2LD37 5005 aa5.79□□□□□ -1.48
COL22A1-203ENST00000435777 HYDINQ4G0P3 5121 aa5.75□□□□□ -1.49
COL22A1-203ENST00000435777 LRP1Q07954 4544 aaKnown RBP5.74□□□□□ -1.49
COL22A1-203ENST00000435777 APOBP04114 4563 aaKnown RBP5.73□□□□□ -1.49
COL22A1-203ENST00000435777 LORP23490 312 aaPredicted RBP5.73□□□□□ -1.49
COL22A1-203ENST00000435777 KMT2CQ8NEZ4 4911 aaKnown RBP5.72□□□□□ -1.49
COL22A1-203ENST00000435777 RYR3Q15413 4870 aa5.68□□□□□ -1.5
COL22A1-203ENST00000435777 KRTAP15-1Q3LI76 137 aa5.67□□□□□ -1.5
COL22A1-203ENST00000435777 PKHD1P08F94 4074 aa5.67□□□□□ -1.5
COL22A1-203ENST00000435777 FAT3Q8TDW7 4589 aa5.64□□□□□ -1.51
COL22A1-203ENST00000435777 KRTAP4-1Q9BYQ7 146 aa5.61□□□□□ -1.51
COL22A1-203ENST00000435777 KRTAP17-1Q9BYP8 105 aa5.6□□□□□ -1.51
COL22A1-203ENST00000435777 PRO2289Q9P1D8 64 aa5.58□□□□□ -1.52
COL22A1-203ENST00000435777 RYR2Q92736 4967 aa5.55□□□□□ -1.52
COL22A1-203ENST00000435777 PKD1P98161 4303 aa5.49□□□□□ -1.53
COL22A1-203ENST00000435777 LRP2P98164 4655 aa5.47□□□□□ -1.53
COL22A1-203ENST00000435777 EPPK1P58107 5090 aaKnown RBP5.4□□□□□ -1.55
COL22A1-203ENST00000435777 HERC2O95714 4834 aa5.39□□□□□ -1.55
COL22A1-203ENST00000435777 HSPG2P98160 4391 aa5.38□□□□□ -1.55
COL22A1-203ENST00000435777 LCE3AQ5TA76 89 aa5.31□□□□□ -1.56
COL22A1-203ENST00000435777 KRTAP10-12P60413 245 aa5.29□□□□□ -1.56
COL22A1-203ENST00000435777 KRTAP23-1A1A580 65 aa5.27□□□□□ -1.57
COL22A1-203ENST00000435777 LPAP08519 4548 aa5.24□□□□□ -1.57
COL22A1-203ENST00000435777 KRTAP12-3P60328 96 aa5.21□□□□□ -1.57
COL22A1-203ENST00000435777 MT1HP80294 61 aa5.21□□□□□ -1.58
COL22A1-203ENST00000435777 PKHD1L1Q86WI1 4243 aa5.2□□□□□ -1.58
COL22A1-203ENST00000435777 BIRC6Q9NR09 4857 aa5.19□□□□□ -1.58
COL22A1-203ENST00000435777 TNXBP22105 4242 aa5.18□□□□□ -1.58
COL22A1-203ENST00000435777 SPRR2GQ9BYE4 73 aa5.18□□□□□ -1.58
COL22A1-203ENST00000435777 MT2AP02795 61 aa5.17□□□□□ -1.58
COL22A1-203ENST00000435777 ABCA13Q86UQ4 5058 aa5.17□□□□□ -1.58
COL22A1-203ENST00000435777 MT1FP04733 61 aa5.13□□□□□ -1.59
COL22A1-203ENST00000435777 PCLOQ9Y6V0 5065 aa5.09□□□□□ -1.59
COL22A1-203ENST00000435777 HERC1Q15751 4861 aa5.07□□□□□ -1.6
COL22A1-203ENST00000435777 KRTAP19-1Q8IUB9 90 aa5.05□□□□□ -1.6
COL22A1-203ENST00000435777 RNF213Q63HN8 5207 aa4.98□□□□□ -1.61
COL22A1-203ENST00000435777 KRTAP19-2Q3LHN2 52 aa4.96□□□□□ -1.62
COL22A1-203ENST00000435777 MUC2Q02817 5179 aa4.96□□□□□ -1.62
COL22A1-203ENST00000435777 LCE2CQ5TA81 110 aa4.94□□□□□ -1.62
COL22A1-203ENST00000435777 INE1O15225 51 aa4.94□□□□□ -1.62
COL22A1-203ENST00000435777 MUC17Q685J3 4493 aa4.91□□□□□ -1.62
COL22A1-203ENST00000435777 KRTAP8-1Q8IUC2 63 aa4.9□□□□□ -1.62
COL22A1-203ENST00000435777 UBR4Q5T4S7 5183 aa4.9□□□□□ -1.62
COL22A1-203ENST00000435777 KRTAP19-8Q3LI54 63 aa4.86□□□□□ -1.63
COL22A1-203ENST00000435777 CRCT1Q9UGL9 99 aa4.86□□□□□ -1.63
COL22A1-203ENST00000435777 KRTAP9-8Q9BYQ0 159 aa4.85□□□□□ -1.63
COL22A1-203ENST00000435777 FLGP20930 4061 aaPredicted RBP4.84□□□□□ -1.64
COL22A1-203ENST00000435777 FSIP2Q5CZC0 6907 aa4.83□□□□□ -1.64
COL22A1-203ENST00000435777 KRTAP10-7P60409 375 aaPredicted RBP4.82□□□□□ -1.64
COL22A1-203ENST00000435777 MT1BP07438 61 aa4.81□□□□□ -1.64
COL22A1-203ENST00000435777 MT1XP80297 61 aa4.81□□□□□ -1.64
COL22A1-203ENST00000435777 KRTAP19-5Q3LI72 72 aa4.8□□□□□ -1.64
COL22A1-203ENST00000435777 FAT4Q6V0I7 4981 aa4.79□□□□□ -1.64
COL22A1-203ENST00000435777 KRTAP10-5P60370 271 aa4.78□□□□□ -1.64
COL22A1-203ENST00000435777 SPRR5A0A1B0GTR4 108 aa4.69□□□□□ -1.66
COL22A1-203ENST00000435777 LCE3CQ5T5A8 94 aa4.68□□□□□ -1.66
COL22A1-203ENST00000435777 KRTAP9-3Q9BYQ3 159 aa4.68□□□□□ -1.66
COL22A1-203ENST00000435777 HMCN2Q8NDA2 5059 aa4.66□□□□□ -1.66
COL22A1-203ENST00000435777 KRTAP4-8A0A0G2JLE6 195 aa4.59□□□□□ -1.67
COL22A1-203ENST00000435777 KRTAP4-8Q9BYQ9 185 aa4.59□□□□□ -1.67
COL22A1-203ENST00000435777 LCE2BO14633 110 aa4.52□□□□□ -1.69
COL22A1-203ENST00000435777 SPRR2FQ96RM1 72 aa4.43□□□□□ -1.7
COL22A1-203ENST00000435777 KRTAP4-7Q9BYR0 210 aa4.38□□□□□ -1.71
COL22A1-203ENST00000435777 KRTAP19-4Q3LI73 84 aa4.37□□□□□ -1.71
COL22A1-203ENST00000435777 USH2AO75445 5202 aa4.32□□□□□ -1.72
COL22A1-203ENST00000435777 MT1GP13640 62 aa4.3□□□□□ -1.72
COL22A1-203ENST00000435777 MT1LQ93083 61 aa4.25□□□□□ -1.73
COL22A1-203ENST00000435777 MT1EP04732 61 aa4.24□□□□□ -1.73
COL22A1-203ENST00000435777 SYNE1Q8NF91 8797 aaKnown RBP4.23□□□□□ -1.73
COL22A1-203ENST00000435777 LCE2AQ5TA79 106 aaPredicted RBP4.23□□□□□ -1.73
COL22A1-203ENST00000435777 KRTAP19-7Q3SYF9 63 aa4.17□□□□□ -1.74
COL22A1-203ENST00000435777 KRTAP9-2Q9BYQ4 174 aa4.17□□□□□ -1.74
COL22A1-203ENST00000435777 LCE3BQ5TA77 95 aa4.16□□□□□ -1.74
COL22A1-203ENST00000435777 KRTAP12-4P60329 112 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms