RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 EPPK1P58107 5090 aaKnown RBP5.41□□□□□ -1.54
CD44-210ENST00000434472 KRTAP17-1Q9BYP8 105 aa5.41□□□□□ -1.54
CD44-210ENST00000434472 H0YAA0 97 aa5.4□□□□□ -1.55
CD44-210ENST00000434472 HSPG2P98160 4391 aa5.38□□□□□ -1.55
CD44-210ENST00000434472 RYR1P21817 5038 aa5.37□□□□□ -1.55
CD44-210ENST00000434472 MT1HL1P0DM35 61 aa5.36□□□□□ -1.55
CD44-210ENST00000434472 PRAC1Q96KF2 57 aa5.35□□□□□ -1.55
CD44-210ENST00000434472 S4R3F8 94 aa5.35□□□□□ -1.55
CD44-210ENST00000434472 K7ERS5 55 aa5.34□□□□□ -1.56
CD44-210ENST00000434472 ADM2Q7Z4H4 148 aa5.33□□□□□ -1.56
CD44-210ENST00000434472 LRP1Q07954 4544 aaKnown RBP5.31□□□□□ -1.56
CD44-210ENST00000434472 TPRXLQ17RH7 258 aa5.3□□□□□ -1.56
CD44-210ENST00000434472 KRTAP10-6P60371 365 aaPredicted RBP5.26□□□□□ -1.57
CD44-210ENST00000434472 DMBT1Q9UGM3 2413 aaPredicted RBP5.26□□□□□ -1.57
CD44-210ENST00000434472 CSAG1Q6PB30 78 aa5.24□□□□□ -1.57
CD44-210ENST00000434472 LINC01554Q52M75 96 aa5.23□□□□□ -1.57
CD44-210ENST00000434472 PCLOQ9Y6V0 5065 aa5.18□□□□□ -1.58
CD44-210ENST00000434472 HERC2O95714 4834 aa5.18□□□□□ -1.58
CD44-210ENST00000434472 KIAA1109Q2LD37 5005 aa5.17□□□□□ -1.58
CD44-210ENST00000434472 KRTAP25-1Q3LHN0 102 aa5.16□□□□□ -1.58
CD44-210ENST00000434472 MYCBP2O75592 4640 aa5.16□□□□□ -1.58
CD44-210ENST00000434472 KRTAP13-4Q3LI77 160 aa5.15□□□□□ -1.58
CD44-210ENST00000434472 P0C880 135 aa5.15□□□□□ -1.59
CD44-210ENST00000434472 ROMO1P60602 79 aa5.15□□□□□ -1.59
CD44-210ENST00000434472 A0A0D9SG42 100 aa5.13□□□□□ -1.59
CD44-210ENST00000434472 SEC61BP60468 96 aaKnown RBP5.13□□□□□ -1.59
CD44-210ENST00000434472 M0QZ58 72 aa5.1□□□□□ -1.59
CD44-210ENST00000434472 KRTAP4-5Q9BYR2 181 aa5.06□□□□□ -1.6
CD44-210ENST00000434472 J3QL48 77 aa5.05□□□□□ -1.6
CD44-210ENST00000434472 KRTAP12-1P59990 96 aa5.01□□□□□ -1.61
CD44-210ENST00000434472 KRTAP12-2P59991 146 aa5.01□□□□□ -1.61
CD44-210ENST00000434472 LRP2P98164 4655 aa5□□□□□ -1.61
CD44-210ENST00000434472 SPINT4Q6UDR6 99 aa5□□□□□ -1.61
CD44-210ENST00000434472 CRIPTQ9P021 101 aa4.98□□□□□ -1.61
CD44-210ENST00000434472 R4GN34 69 aa4.94□□□□□ -1.62
CD44-210ENST00000434472 ABCA13Q86UQ4 5058 aa4.94□□□□□ -1.62
CD44-210ENST00000434472 KRTAP4-1Q9BYQ7 146 aa4.92□□□□□ -1.62
CD44-210ENST00000434472 LPAP08519 4548 aa4.91□□□□□ -1.62
CD44-210ENST00000434472 LCE2BO14633 110 aa4.9□□□□□ -1.62
CD44-210ENST00000434472 MUC17Q685J3 4493 aa4.9□□□□□ -1.63
CD44-210ENST00000434472 KRTAP19-2Q3LHN2 52 aa4.86□□□□□ -1.63
CD44-210ENST00000434472 C10orf95Q9H7T3 257 aa4.84□□□□□ -1.63
CD44-210ENST00000434472 HERC1Q15751 4861 aa4.83□□□□□ -1.64
CD44-210ENST00000434472 LORP23490 312 aaPredicted RBP4.79□□□□□ -1.64
CD44-210ENST00000434472 H3BS24 57 aa4.72□□□□□ -1.65
CD44-210ENST00000434472 CAMK2N1Q7Z7J9 78 aa4.69□□□□□ -1.66
CD44-210ENST00000434472 FLGP20930 4061 aaPredicted RBP4.69□□□□□ -1.66
CD44-210ENST00000434472 KRTAP15-1Q3LI76 137 aa4.67□□□□□ -1.66
CD44-210ENST00000434472 PP632Q6XCG6 107 aa4.64□□□□□ -1.67
CD44-210ENST00000434472 UBR4Q5T4S7 5183 aa4.64□□□□□ -1.67
CD44-210ENST00000434472 LCE2AQ5TA79 106 aaPredicted RBP4.62□□□□□ -1.67
CD44-210ENST00000434472 LCE2CQ5TA81 110 aa4.61□□□□□ -1.67
CD44-210ENST00000434472 HMCN2Q8NDA2 5059 aa4.6□□□□□ -1.67
CD44-210ENST00000434472 KRTAP23-1A1A580 65 aa4.54□□□□□ -1.68
CD44-210ENST00000434472 TNP1P09430 55 aa4.54□□□□□ -1.68
CD44-210ENST00000434472 PLAC4Q8WY50 150 aa4.53□□□□□ -1.68
CD44-210ENST00000434472 SPRR2GQ9BYE4 73 aa4.52□□□□□ -1.69
CD44-210ENST00000434472 M0R2T5 61 aa4.51□□□□□ -1.69
CD44-210ENST00000434472 NDUFAF8A1L188 74 aa4.48□□□□□ -1.69
CD44-210ENST00000434472 MT1HP80294 61 aa4.48□□□□□ -1.69
CD44-210ENST00000434472 KRTAP19-1Q8IUB9 90 aa4.46□□□□□ -1.7
CD44-210ENST00000434472 MUC2Q02817 5179 aa4.42□□□□□ -1.7
CD44-210ENST00000434472 MT2AP02795 61 aa4.41□□□□□ -1.7
CD44-210ENST00000434472 KRTAP10-10P60014 251 aa4.41□□□□□ -1.7
CD44-210ENST00000434472 RNF213Q63HN8 5207 aa4.41□□□□□ -1.7
CD44-210ENST00000434472 LUZP6Q538Z0 58 aa4.39□□□□□ -1.71
CD44-210ENST00000434472 MT1FP04733 61 aa4.38□□□□□ -1.71
CD44-210ENST00000434472 KRTAP9-8Q9BYQ0 159 aa4.36□□□□□ -1.71
CD44-210ENST00000434472 KRTAP19-8Q3LI54 63 aa4.35□□□□□ -1.71
CD44-210ENST00000434472 KRTAP9-2Q9BYQ4 174 aa4.28□□□□□ -1.72
CD44-210ENST00000434472 FAT4Q6V0I7 4981 aa4.28□□□□□ -1.72
CD44-210ENST00000434472 SPRR5A0A1B0GTR4 108 aa4.24□□□□□ -1.73
CD44-210ENST00000434472 MT1BP07438 61 aa4.24□□□□□ -1.73
CD44-210ENST00000434472 LCE3AQ5TA76 89 aa4.24□□□□□ -1.73
CD44-210ENST00000434472 KRTAP9-6A0A140TA67 174 aa4.23□□□□□ -1.73
CD44-210ENST00000434472 A0A0A0MQY5 61 aa4.21□□□□□ -1.73
CD44-210ENST00000434472 KRTAP10-5P60370 271 aa4.2□□□□□ -1.74
CD44-210ENST00000434472 KRTAP9-3Q9BYQ3 159 aa4.2□□□□□ -1.74
CD44-210ENST00000434472 MT1XP80297 61 aa4.18□□□□□ -1.74
CD44-210ENST00000434472 KRTAP8-1Q8IUC2 63 aa4.18□□□□□ -1.74
CD44-210ENST00000434472 PRO2289Q9P1D8 64 aa4.15□□□□□ -1.74
CD44-210ENST00000434472 KRTAP10-12P60413 245 aa4.13□□□□□ -1.75
CD44-210ENST00000434472 LOC100996750A0A140TA64 210 aa4.11□□□□□ -1.75
CD44-210ENST00000434472 KRTAP4-6Q9BYQ5 205 aa4.11□□□□□ -1.75
CD44-210ENST00000434472 KRTAP12-3P60328 96 aa4.06□□□□□ -1.76
CD44-210ENST00000434472 KRTAP10-7P60409 375 aaPredicted RBP4.04□□□□□ -1.76
CD44-210ENST00000434472 CRCT1Q9UGL9 99 aa4□□□□□ -1.77
CD44-210ENST00000434472 FSIP2Q5CZC0 6907 aa3.97□□□□□ -1.77
CD44-210ENST00000434472 KRTAP19-5Q3LI72 72 aa3.89□□□□□ -1.79
CD44-210ENST00000434472 INE1O15225 51 aa3.84□□□□□ -1.79
CD44-210ENST00000434472 LCE3CQ5T5A8 94 aa3.83□□□□□ -1.8
CD44-210ENST00000434472 KRTAP19-4Q3LI73 84 aa3.81□□□□□ -1.8
CD44-210ENST00000434472 KRTAP9-7A8MTY7 169 aa3.77□□□□□ -1.81
CD44-210ENST00000434472 KRTAP4-8A0A0G2JLE6 195 aa3.76□□□□□ -1.81
CD44-210ENST00000434472 KRTAP4-8Q9BYQ9 185 aa3.76□□□□□ -1.81
CD44-210ENST00000434472 USH2AO75445 5202 aa3.76□□□□□ -1.81
CD44-210ENST00000434472 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.73□□□□□ -1.81
CD44-210ENST00000434472 KRTAP19-7Q3SYF9 63 aa3.73□□□□□ -1.81
CD44-210ENST00000434472 KRTAP5-3Q6L8H2 238 aa3.72□□□□□ -1.81
CD44-210ENST00000434472 KRTAP19-6Q3LI70 58 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms