RNA–Protein interactions for RNA: ENST00000432645.6

HDAC9-212, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-212ENST00000432645 A0A1B0GU69 56 aa4.63□□□□□ -1.67
HDAC9-212ENST00000432645 C9orf92A6NGG3 77 aa4.62□□□□□ -1.67
HDAC9-212ENST00000432645 K7ERS5 55 aa4.62□□□□□ -1.67
HDAC9-212ENST00000432645 DMAC1Q96GE9 116 aa4.62□□□□□ -1.67
HDAC9-212ENST00000432645 KIAA1109Q2LD37 5005 aa4.62□□□□□ -1.67
HDAC9-212ENST00000432645 RPS29P62273 56 aaKnown RBP4.61□□□□□ -1.67
HDAC9-212ENST00000432645 KRTAP17-1Q9BYP8 105 aa4.61□□□□□ -1.67
HDAC9-212ENST00000432645 RYR1P21817 5038 aa4.6□□□□□ -1.67
HDAC9-212ENST00000432645 EPPK1P58107 5090 aaKnown RBP4.6□□□□□ -1.67
HDAC9-212ENST00000432645 FLG2Q5D862 2391 aaPredicted RBP4.59□□□□□ -1.67
HDAC9-212ENST00000432645 Q8N1X5 172 aa4.59□□□□□ -1.67
HDAC9-212ENST00000432645 IGKV2D-30A0A075B6S6 120 aa4.59□□□□□ -1.68
HDAC9-212ENST00000432645 IGKV2-30P06310 120 aa4.59□□□□□ -1.68
HDAC9-212ENST00000432645 MYCBP2O75592 4640 aa4.58□□□□□ -1.68
HDAC9-212ENST00000432645 TNXBP22105 4242 aa4.57□□□□□ -1.68
HDAC9-212ENST00000432645 KRTAP15-1Q3LI76 137 aa4.56□□□□□ -1.68
HDAC9-212ENST00000432645 DMBT1Q9UGM3 2413 aaPredicted RBP4.55□□□□□ -1.68
HDAC9-212ENST00000432645 KRTAP10-8P60410 259 aa4.54□□□□□ -1.68
HDAC9-212ENST00000432645 FAT3Q8TDW7 4589 aa4.53□□□□□ -1.68
HDAC9-212ENST00000432645 ACYP2P14621 99 aa4.52□□□□□ -1.69
HDAC9-212ENST00000432645 SPINT4Q6UDR6 99 aa4.51□□□□□ -1.69
HDAC9-212ENST00000432645 MT1HL1P0DM35 61 aa4.45□□□□□ -1.7
HDAC9-212ENST00000432645 KRTAP4-5Q9BYR2 181 aa4.44□□□□□ -1.7
HDAC9-212ENST00000432645 ABCA13Q86UQ4 5058 aa4.41□□□□□ -1.7
HDAC9-212ENST00000432645 XP32Q5T750 250 aa4.39□□□□□ -1.71
HDAC9-212ENST00000432645 CRIPTQ9P021 101 aa4.38□□□□□ -1.71
HDAC9-212ENST00000432645 KRTAP3-1Q9BYR8 98 aa4.37□□□□□ -1.71
HDAC9-212ENST00000432645 RPL37P61927 97 aaKnown RBP4.36□□□□□ -1.71
HDAC9-212ENST00000432645 LPAP08519 4548 aa4.36□□□□□ -1.71
HDAC9-212ENST00000432645 H0YAA0 97 aa4.35□□□□□ -1.71
HDAC9-212ENST00000432645 LRP2P98164 4655 aa4.34□□□□□ -1.71
HDAC9-212ENST00000432645 CAMK2N1Q7Z7J9 78 aa4.32□□□□□ -1.72
HDAC9-212ENST00000432645 HERC2O95714 4834 aa4.31□□□□□ -1.72
HDAC9-212ENST00000432645 COX6B2Q6YFQ2 88 aa4.3□□□□□ -1.72
HDAC9-212ENST00000432645 TPRXLQ17RH7 258 aa4.3□□□□□ -1.72
HDAC9-212ENST00000432645 BIRC6Q9NR09 4857 aa4.25□□□□□ -1.73
HDAC9-212ENST00000432645 A0A1B0GU33 70 aa4.18□□□□□ -1.74
HDAC9-212ENST00000432645 PCLOQ9Y6V0 5065 aa4.18□□□□□ -1.74
HDAC9-212ENST00000432645 S4R3F8 94 aa4.18□□□□□ -1.74
HDAC9-212ENST00000432645 HERC1Q15751 4861 aa4.16□□□□□ -1.74
HDAC9-212ENST00000432645 MUC2Q02817 5179 aa4.15□□□□□ -1.74
HDAC9-212ENST00000432645 H1FX-AS1Q4G0G2 97 aa4.15□□□□□ -1.75
HDAC9-212ENST00000432645 C10orf95Q9H7T3 257 aa4.14□□□□□ -1.75
HDAC9-212ENST00000432645 A0A0D9SG42 100 aa4.13□□□□□ -1.75
HDAC9-212ENST00000432645 KRTAP23-1A1A580 65 aa4.12□□□□□ -1.75
HDAC9-212ENST00000432645 KRTAP4-1Q9BYQ7 146 aa4.11□□□□□ -1.75
HDAC9-212ENST00000432645 MUC17Q685J3 4493 aa4.11□□□□□ -1.75
HDAC9-212ENST00000432645 KRTAP10-6P60371 365 aaPredicted RBP4.09□□□□□ -1.75
HDAC9-212ENST00000432645 KRTAP13-4Q3LI77 160 aa4.08□□□□□ -1.76
HDAC9-212ENST00000432645 PRO2289Q9P1D8 64 aa4.06□□□□□ -1.76
HDAC9-212ENST00000432645 HMCN2Q8NDA2 5059 aa4.04□□□□□ -1.76
HDAC9-212ENST00000432645 PLAC4Q8WY50 150 aa3.99□□□□□ -1.77
HDAC9-212ENST00000432645 KRTAP19-2Q3LHN2 52 aa3.97□□□□□ -1.77
HDAC9-212ENST00000432645 RNF213Q63HN8 5207 aa3.94□□□□□ -1.78
HDAC9-212ENST00000432645 UBR4Q5T4S7 5183 aa3.94□□□□□ -1.78
HDAC9-212ENST00000432645 FAT4Q6V0I7 4981 aa3.94□□□□□ -1.78
HDAC9-212ENST00000432645 KRTAP12-2P59991 146 aa3.93□□□□□ -1.78
HDAC9-212ENST00000432645 R4GN34 69 aa3.93□□□□□ -1.78
HDAC9-212ENST00000432645 M0QZ58 72 aa3.9□□□□□ -1.79
HDAC9-212ENST00000432645 FLGP20930 4061 aaPredicted RBP3.89□□□□□ -1.79
HDAC9-212ENST00000432645 KRTAP12-1P59990 96 aa3.86□□□□□ -1.79
HDAC9-212ENST00000432645 INE1O15225 51 aa3.8□□□□□ -1.8
HDAC9-212ENST00000432645 M0R2T5 61 aa3.79□□□□□ -1.8
HDAC9-212ENST00000432645 MT1HP80294 61 aa3.75□□□□□ -1.81
HDAC9-212ENST00000432645 KRTAP10-10P60014 251 aa3.65□□□□□ -1.82
HDAC9-212ENST00000432645 SPRR5A0A1B0GTR4 108 aa3.65□□□□□ -1.83
HDAC9-212ENST00000432645 MT1FP04733 61 aa3.64□□□□□ -1.83
HDAC9-212ENST00000432645 MT2AP02795 61 aa3.64□□□□□ -1.83
HDAC9-212ENST00000432645 KRTAP9-8Q9BYQ0 159 aa3.63□□□□□ -1.83
HDAC9-212ENST00000432645 KRTAP19-1Q8IUB9 90 aa3.62□□□□□ -1.83
HDAC9-212ENST00000432645 SPRR2GQ9BYE4 73 aa3.6□□□□□ -1.83
HDAC9-212ENST00000432645 PP632Q6XCG6 107 aa3.59□□□□□ -1.84
HDAC9-212ENST00000432645 LCE4AQ5TA78 99 aa3.57□□□□□ -1.84
HDAC9-212ENST00000432645 TNP1P09430 55 aa3.48□□□□□ -1.85
HDAC9-212ENST00000432645 KRTAP9-3Q9BYQ3 159 aa3.48□□□□□ -1.85
HDAC9-212ENST00000432645 MT1BP07438 61 aa3.46□□□□□ -1.86
HDAC9-212ENST00000432645 KRTAP19-8Q3LI54 63 aa3.46□□□□□ -1.86
HDAC9-212ENST00000432645 KRTAP9-6A0A140TA67 174 aa3.45□□□□□ -1.86
HDAC9-212ENST00000432645 KRTAP9-7A8MTY7 169 aa3.45□□□□□ -1.86
HDAC9-212ENST00000432645 USH2AO75445 5202 aa3.45□□□□□ -1.86
HDAC9-212ENST00000432645 KRTAP9-4Q9BYQ2 154 aa3.42□□□□□ -1.86
HDAC9-212ENST00000432645 KRTAP9-9Q9BYP9 154 aa3.4□□□□□ -1.87
HDAC9-212ENST00000432645 KRTAP10-5P60370 271 aa3.39□□□□□ -1.87
HDAC9-212ENST00000432645 MT1XP80297 61 aa3.39□□□□□ -1.87
HDAC9-212ENST00000432645 LCE3AQ5TA76 89 aa3.34□□□□□ -1.87
HDAC9-212ENST00000432645 FSIP2Q5CZC0 6907 aa3.32□□□□□ -1.88
HDAC9-212ENST00000432645 KRTAP10-7P60409 375 aaPredicted RBP3.3□□□□□ -1.88
HDAC9-212ENST00000432645 KRTAP19-4Q3LI73 84 aa3.3□□□□□ -1.88
HDAC9-212ENST00000432645 KMT2DO14686 5537 aa3.27□□□□□ -1.89
HDAC9-212ENST00000432645 KRTAP10-12P60413 245 aa3.27□□□□□ -1.89
HDAC9-212ENST00000432645 LCE5AQ5TCM9 118 aa3.24□□□□□ -1.89
HDAC9-212ENST00000432645 KRTAP8-1Q8IUC2 63 aa3.21□□□□□ -1.9
HDAC9-212ENST00000432645 KRTAP9-2Q9BYQ4 174 aa3.21□□□□□ -1.9
HDAC9-212ENST00000432645 SSPOA2VEC9 5147 aa3.19□□□□□ -1.9
HDAC9-212ENST00000432645 KRTAP12-3P60328 96 aa3.18□□□□□ -1.9
HDAC9-212ENST00000432645 KRTAP4-8A0A0G2JLE6 195 aa3.17□□□□□ -1.9
HDAC9-212ENST00000432645 KRTAP4-8Q9BYQ9 185 aa3.17□□□□□ -1.9
HDAC9-212ENST00000432645 KRTAP19-5Q3LI72 72 aa3.13□□□□□ -1.91
HDAC9-212ENST00000432645 KRTAP4-12Q9BQ66 201 aa3.11□□□□□ -1.91
HDAC9-212ENST00000432645 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms