RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 TRAV13-2A0A0B4J235 113 aa0.7□□□□□ -2.3
HMGB1P27-201ENST00000431429 D6R8Y8 96 aa0.7□□□□□ -2.3
HMGB1P27-201ENST00000431429 NCR3O14931 201 aa0.7□□□□□ -2.3
HMGB1P27-201ENST00000431429 TRACP01848 142 aa0.7□□□□□ -2.3
HMGB1P27-201ENST00000431429 MT1BP07438 61 aa0.7□□□□□ -2.3
HMGB1P27-201ENST00000431429 SPINK7P58062 85 aa0.7□□□□□ -2.3
HMGB1P27-201ENST00000431429 RBM3P98179 157 aaKnown RBP0.7□□□□□ -2.3
HMGB1P27-201ENST00000431429 MIR22HGQ0VDD5 57 aa0.7□□□□□ -2.3
HMGB1P27-201ENST00000431429 CASC2Q6XLA1 102 aa0.7□□□□□ -2.3
HMGB1P27-201ENST00000431429 Q8N8P6 123 aa0.7□□□□□ -2.3
HMGB1P27-201ENST00000431429 FAM213BQ8TBF2 198 aa0.7□□□□□ -2.3
HMGB1P27-201ENST00000431429 BRK1Q8WUW1 75 aa0.7□□□□□ -2.3
HMGB1P27-201ENST00000431429 DSCR8Q96T75 97 aa0.7□□□□□ -2.3
HMGB1P27-201ENST00000431429 SPRR2GQ9BYE4 73 aa0.7□□□□□ -2.3
HMGB1P27-201ENST00000431429 CRIPTQ9P021 101 aa0.7□□□□□ -2.3
HMGB1P27-201ENST00000431429 HSPB8Q9UJY1 196 aa0.7□□□□□ -2.3
HMGB1P27-201ENST00000431429 TRBV7-7A0A0K0K1E9 115 aa0.69□□□□□ -2.3
HMGB1P27-201ENST00000431429 MYMXA0A1B0GTQ4 84 aa0.69□□□□□ -2.3
HMGB1P27-201ENST00000431429 H3BMG7 143 aa0.69□□□□□ -2.3
HMGB1P27-201ENST00000431429 COX7BP24311 80 aa0.69□□□□□ -2.3
HMGB1P27-201ENST00000431429 MT4P47944 62 aa0.69□□□□□ -2.3
HMGB1P27-201ENST00000431429 CSAG1Q6PB30 78 aa0.69□□□□□ -2.3
HMGB1P27-201ENST00000431429 TCTE3Q8IZS6 198 aa0.69□□□□□ -2.3
HMGB1P27-201ENST00000431429 PLAC4Q8WY50 150 aa0.69□□□□□ -2.3
HMGB1P27-201ENST00000431429 CLEC2BQ92478 149 aa0.69□□□□□ -2.3
HMGB1P27-201ENST00000431429 A0A1B0GX51 115 aa0.68□□□□□ -2.3
HMGB1P27-201ENST00000431429 SMIM13P0DJ93 91 aa0.68□□□□□ -2.3
HMGB1P27-201ENST00000431429 PDE6GP18545 87 aa0.68□□□□□ -2.3
HMGB1P27-201ENST00000431429 RPS28P62857 69 aaKnown RBP0.68□□□□□ -2.3
HMGB1P27-201ENST00000431429 TMEM170BQ5T4T1 132 aa0.68□□□□□ -2.3
HMGB1P27-201ENST00000431429 WFDC13Q8IUB5 93 aa0.68□□□□□ -2.3
HMGB1P27-201ENST00000431429 SMIM7Q9BQ49 75 aa0.68□□□□□ -2.3
HMGB1P27-201ENST00000431429 IGLV5-48A0A075B6I7 105 aa0.67□□□□□ -2.3
HMGB1P27-201ENST00000431429 KANTRA0A1W2PQU2 76 aa0.67□□□□□ -2.3
HMGB1P27-201ENST00000431429 SMIM27A0A1W2PRY6 76 aa0.67□□□□□ -2.3
HMGB1P27-201ENST00000431429 JMJD7-PLA2G4BH0Y9G9 81 aa0.67□□□□□ -2.3
HMGB1P27-201ENST00000431429 J3QR89 54 aa0.67□□□□□ -2.3
HMGB1P27-201ENST00000431429 UQCRQO14949 82 aa0.67□□□□□ -2.3
HMGB1P27-201ENST00000431429 SNCGO76070 127 aa0.67□□□□□ -2.3
HMGB1P27-201ENST00000431429 HBDP02042 147 aa0.67□□□□□ -2.3
HMGB1P27-201ENST00000431429 IGLC3P0DOY3 106 aa0.67□□□□□ -2.3
HMGB1P27-201ENST00000431429 ELOF1P60002 83 aaKnown RBP0.67□□□□□ -2.3
HMGB1P27-201ENST00000431429 KLKP1Q107X0 134 aa0.67□□□□□ -2.3
HMGB1P27-201ENST00000431429 OCIAD2Q56VL3 154 aa0.67□□□□□ -2.3
HMGB1P27-201ENST00000431429 S100ZQ8WXG8 99 aa0.67□□□□□ -2.3
HMGB1P27-201ENST00000431429 SNHG12Q9BXW3 62 aa0.67□□□□□ -2.3
HMGB1P27-201ENST00000431429 C9JAW5 83 aa0.66□□□□□ -2.3
HMGB1P27-201ENST00000431429 SPATA45Q537H7 98 aa0.66□□□□□ -2.3
HMGB1P27-201ENST00000431429 PPDPFLQ8WWR9 84 aa0.66□□□□□ -2.3
HMGB1P27-201ENST00000431429 COPS9Q8WXC6 57 aa0.66□□□□□ -2.3
HMGB1P27-201ENST00000431429 SPANXDQ9BXN6 97 aa0.66□□□□□ -2.3
HMGB1P27-201ENST00000431429 SMCO4Q9NRQ5 59 aa0.66□□□□□ -2.3
HMGB1P27-201ENST00000431429 V9GYV3 84 aa0.66□□□□□ -2.3
HMGB1P27-201ENST00000431429 ARPC5O15511 151 aa0.65□□□□□ -2.31
HMGB1P27-201ENST00000431429 ADCYAP1P18509 176 aa0.65□□□□□ -2.31
HMGB1P27-201ENST00000431429 BAGE3Q86Y29 109 aa0.65□□□□□ -2.31
HMGB1P27-201ENST00000431429 C12orf57Q99622 126 aa0.65□□□□□ -2.31
HMGB1P27-201ENST00000431429 VPS25Q9BRG1 176 aa0.65□□□□□ -2.31
HMGB1P27-201ENST00000431429 K7EQZ3 153 aa0.64□□□□□ -2.31
HMGB1P27-201ENST00000431429 NDUFB1O75438 58 aa0.64□□□□□ -2.31
HMGB1P27-201ENST00000431429 MT-ND4LP03901 98 aa0.64□□□□□ -2.31
HMGB1P27-201ENST00000431429 ADIRFQ15847 76 aa0.64□□□□□ -2.31
HMGB1P27-201ENST00000431429 LINC00575Q6W349 94 aa0.64□□□□□ -2.31
HMGB1P27-201ENST00000431429 hADV29S1A0JD25 119 aa0.63□□□□□ -2.31
HMGB1P27-201ENST00000431429 LINC01546A6NGU7 62 aa0.63□□□□□ -2.31
HMGB1P27-201ENST00000431429 K7ERU9 68 aa0.63□□□□□ -2.31
HMGB1P27-201ENST00000431429 MT1GP13640 62 aa0.63□□□□□ -2.31
HMGB1P27-201ENST00000431429 MT1XP80297 61 aa0.63□□□□□ -2.31
HMGB1P27-201ENST00000431429 S4R3F8 94 aa0.63□□□□□ -2.31
HMGB1P27-201ENST00000431429 AHNAKQ09666 5890 aaKnown RBP0.63□□□□□ -2.31
HMGB1P27-201ENST00000431429 TRBV7-4A0A0J9YYF1 115 aa0.62□□□□□ -2.31
HMGB1P27-201ENST00000431429 LOC105371267A0A1B0GV96 52 aa0.62□□□□□ -2.31
HMGB1P27-201ENST00000431429 H0YAA0 97 aa0.62□□□□□ -2.31
HMGB1P27-201ENST00000431429 PLNP26678 52 aa0.62□□□□□ -2.31
HMGB1P27-201ENST00000431429 PEA15Q15121 130 aa0.62□□□□□ -2.31
HMGB1P27-201ENST00000431429 CLLU1Q5K131 121 aa0.62□□□□□ -2.31
HMGB1P27-201ENST00000431429 Q6ZQY7 126 aa0.62□□□□□ -2.31
HMGB1P27-201ENST00000431429 KRTAP19-3Q7Z4W3 81 aa0.62□□□□□ -2.31
HMGB1P27-201ENST00000431429 ATOH7Q8N100 152 aa0.62□□□□□ -2.31
HMGB1P27-201ENST00000431429 LINC00308Q8TCZ7 52 aa0.62□□□□□ -2.31
HMGB1P27-201ENST00000431429 MUC5ACP98088 5654 aa0.62□□□□□ -2.31
HMGB1P27-201ENST00000431429 A0A1W2PPM0 123 aa0.61□□□□□ -2.31
HMGB1P27-201ENST00000431429 IFITM1P13164 125 aa0.61□□□□□ -2.31
HMGB1P27-201ENST00000431429 NPC2P61916 151 aa0.61□□□□□ -2.31
HMGB1P27-201ENST00000431429 BVES-AS1Q5T3Y7 98 aa0.61□□□□□ -2.31
HMGB1P27-201ENST00000431429 DMAC1Q96GE9 116 aa0.61□□□□□ -2.31
HMGB1P27-201ENST00000431429 SEC11CQ9BY50 192 aa0.61□□□□□ -2.31
HMGB1P27-201ENST00000431429 MUC16Q8WXI7 14507 aa0.6□□□□□ -2.31
HMGB1P27-201ENST00000431429 H3BUT2 72 aa0.6□□□□□ -2.31
HMGB1P27-201ENST00000431429 S100PP25815 95 aa0.6□□□□□ -2.31
HMGB1P27-201ENST00000431429 KRTAP20-2Q3LI61 65 aa0.6□□□□□ -2.31
HMGB1P27-201ENST00000431429 MUSTN1Q8IVN3 82 aa0.6□□□□□ -2.31
HMGB1P27-201ENST00000431429 C20orf197Q8N268 126 aa0.6□□□□□ -2.31
HMGB1P27-201ENST00000431429 IFI27L1Q96BM0 104 aa0.6□□□□□ -2.31
HMGB1P27-201ENST00000431429 LINC00472Q9H8W2 130 aa0.6□□□□□ -2.31
HMGB1P27-201ENST00000431429 MUC5BQ9HC84 5762 aaPredicted RBP0.6□□□□□ -2.31
HMGB1P27-201ENST00000431429 H0YGX0 51 aa0.59□□□□□ -2.31
HMGB1P27-201ENST00000431429 CCDC179H3BU77 68 aa0.59□□□□□ -2.31
HMGB1P27-201ENST00000431429 NDUFC1O43677 76 aa0.59□□□□□ -2.31
HMGB1P27-201ENST00000431429 IGKCP01834 107 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms