RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 TRAV13-2A0A0B4J235 113 aa0.7□□□□□ -2.3
HMGB1P27-201ENST00000431429 D6R8Y8 96 aa0.7□□□□□ -2.3
HMGB1P27-201ENST00000431429 NCR3O14931 201 aa0.7□□□□□ -2.3
HMGB1P27-201ENST00000431429 TRACP01848 142 aa0.7□□□□□ -2.3
HMGB1P27-201ENST00000431429 MT1BP07438 61 aa0.7□□□□□ -2.3
HMGB1P27-201ENST00000431429 SPINK7P58062 85 aa0.7□□□□□ -2.3
HMGB1P27-201ENST00000431429 RBM3P98179 157 aaKnown RBP0.7□□□□□ -2.3
HMGB1P27-201ENST00000431429 MIR22HGQ0VDD5 57 aa0.7□□□□□ -2.3
HMGB1P27-201ENST00000431429 CASC2Q6XLA1 102 aa0.7□□□□□ -2.3
HMGB1P27-201ENST00000431429 Q8N8P6 123 aa0.7□□□□□ -2.3
HMGB1P27-201ENST00000431429 FAM213BQ8TBF2 198 aa0.7□□□□□ -2.3
HMGB1P27-201ENST00000431429 BRK1Q8WUW1 75 aa0.7□□□□□ -2.3
HMGB1P27-201ENST00000431429 DSCR8Q96T75 97 aa0.7□□□□□ -2.3
HMGB1P27-201ENST00000431429 SPRR2GQ9BYE4 73 aa0.7□□□□□ -2.3
HMGB1P27-201ENST00000431429 CRIPTQ9P021 101 aa0.7□□□□□ -2.3
HMGB1P27-201ENST00000431429 HSPB8Q9UJY1 196 aa0.7□□□□□ -2.3
HMGB1P27-201ENST00000431429 TRBV7-7A0A0K0K1E9 115 aa0.69□□□□□ -2.3
HMGB1P27-201ENST00000431429 MYMXA0A1B0GTQ4 84 aa0.69□□□□□ -2.3
HMGB1P27-201ENST00000431429 H3BMG7 143 aa0.69□□□□□ -2.3
HMGB1P27-201ENST00000431429 COX7BP24311 80 aa0.69□□□□□ -2.3
HMGB1P27-201ENST00000431429 MT4P47944 62 aa0.69□□□□□ -2.3
HMGB1P27-201ENST00000431429 CSAG1Q6PB30 78 aa0.69□□□□□ -2.3
HMGB1P27-201ENST00000431429 TCTE3Q8IZS6 198 aa0.69□□□□□ -2.3
HMGB1P27-201ENST00000431429 PLAC4Q8WY50 150 aa0.69□□□□□ -2.3
HMGB1P27-201ENST00000431429 CLEC2BQ92478 149 aa0.69□□□□□ -2.3
HMGB1P27-201ENST00000431429 A0A1B0GX51 115 aa0.68□□□□□ -2.3
HMGB1P27-201ENST00000431429 SMIM13P0DJ93 91 aa0.68□□□□□ -2.3
HMGB1P27-201ENST00000431429 PDE6GP18545 87 aa0.68□□□□□ -2.3
HMGB1P27-201ENST00000431429 RPS28P62857 69 aaKnown RBP0.68□□□□□ -2.3
HMGB1P27-201ENST00000431429 TMEM170BQ5T4T1 132 aa0.68□□□□□ -2.3
HMGB1P27-201ENST00000431429 WFDC13Q8IUB5 93 aa0.68□□□□□ -2.3
HMGB1P27-201ENST00000431429 SMIM7Q9BQ49 75 aa0.68□□□□□ -2.3
HMGB1P27-201ENST00000431429 IGLV5-48A0A075B6I7 105 aa0.67□□□□□ -2.3
HMGB1P27-201ENST00000431429 KANTRA0A1W2PQU2 76 aa0.67□□□□□ -2.3
HMGB1P27-201ENST00000431429 SMIM27A0A1W2PRY6 76 aa0.67□□□□□ -2.3
HMGB1P27-201ENST00000431429 JMJD7-PLA2G4BH0Y9G9 81 aa0.67□□□□□ -2.3
HMGB1P27-201ENST00000431429 J3QR89 54 aa0.67□□□□□ -2.3
HMGB1P27-201ENST00000431429 UQCRQO14949 82 aa0.67□□□□□ -2.3
HMGB1P27-201ENST00000431429 SNCGO76070 127 aa0.67□□□□□ -2.3
HMGB1P27-201ENST00000431429 HBDP02042 147 aa0.67□□□□□ -2.3
HMGB1P27-201ENST00000431429 IGLC3P0DOY3 106 aa0.67□□□□□ -2.3
HMGB1P27-201ENST00000431429 ELOF1P60002 83 aaKnown RBP0.67□□□□□ -2.3
HMGB1P27-201ENST00000431429 KLKP1Q107X0 134 aa0.67□□□□□ -2.3
HMGB1P27-201ENST00000431429 OCIAD2Q56VL3 154 aa0.67□□□□□ -2.3
HMGB1P27-201ENST00000431429 S100ZQ8WXG8 99 aa0.67□□□□□ -2.3
HMGB1P27-201ENST00000431429 SNHG12Q9BXW3 62 aa0.67□□□□□ -2.3
HMGB1P27-201ENST00000431429 C9JAW5 83 aa0.66□□□□□ -2.3
HMGB1P27-201ENST00000431429 SPATA45Q537H7 98 aa0.66□□□□□ -2.3
HMGB1P27-201ENST00000431429 PPDPFLQ8WWR9 84 aa0.66□□□□□ -2.3
HMGB1P27-201ENST00000431429 COPS9Q8WXC6 57 aa0.66□□□□□ -2.3
HMGB1P27-201ENST00000431429 SPANXDQ9BXN6 97 aa0.66□□□□□ -2.3
HMGB1P27-201ENST00000431429 SMCO4Q9NRQ5 59 aa0.66□□□□□ -2.3
HMGB1P27-201ENST00000431429 V9GYV3 84 aa0.66□□□□□ -2.3
HMGB1P27-201ENST00000431429 ARPC5O15511 151 aa0.65□□□□□ -2.31
HMGB1P27-201ENST00000431429 ADCYAP1P18509 176 aa0.65□□□□□ -2.31
HMGB1P27-201ENST00000431429 BAGE3Q86Y29 109 aa0.65□□□□□ -2.31
HMGB1P27-201ENST00000431429 C12orf57Q99622 126 aa0.65□□□□□ -2.31
HMGB1P27-201ENST00000431429 VPS25Q9BRG1 176 aa0.65□□□□□ -2.31
HMGB1P27-201ENST00000431429 K7EQZ3 153 aa0.64□□□□□ -2.31
HMGB1P27-201ENST00000431429 NDUFB1O75438 58 aa0.64□□□□□ -2.31
HMGB1P27-201ENST00000431429 MT-ND4LP03901 98 aa0.64□□□□□ -2.31
HMGB1P27-201ENST00000431429 ADIRFQ15847 76 aa0.64□□□□□ -2.31
HMGB1P27-201ENST00000431429 LINC00575Q6W349 94 aa0.64□□□□□ -2.31
HMGB1P27-201ENST00000431429 hADV29S1A0JD25 119 aa0.63□□□□□ -2.31
HMGB1P27-201ENST00000431429 LINC01546A6NGU7 62 aa0.63□□□□□ -2.31
HMGB1P27-201ENST00000431429 K7ERU9 68 aa0.63□□□□□ -2.31
HMGB1P27-201ENST00000431429 MT1GP13640 62 aa0.63□□□□□ -2.31
HMGB1P27-201ENST00000431429 MT1XP80297 61 aa0.63□□□□□ -2.31
HMGB1P27-201ENST00000431429 S4R3F8 94 aa0.63□□□□□ -2.31
HMGB1P27-201ENST00000431429 AHNAKQ09666 5890 aaKnown RBP0.63□□□□□ -2.31
HMGB1P27-201ENST00000431429 TRBV7-4A0A0J9YYF1 115 aa0.62□□□□□ -2.31
HMGB1P27-201ENST00000431429 LOC105371267A0A1B0GV96 52 aa0.62□□□□□ -2.31
HMGB1P27-201ENST00000431429 H0YAA0 97 aa0.62□□□□□ -2.31
HMGB1P27-201ENST00000431429 PLNP26678 52 aa0.62□□□□□ -2.31
HMGB1P27-201ENST00000431429 PEA15Q15121 130 aa0.62□□□□□ -2.31
HMGB1P27-201ENST00000431429 CLLU1Q5K131 121 aa0.62□□□□□ -2.31
HMGB1P27-201ENST00000431429 Q6ZQY7 126 aa0.62□□□□□ -2.31
HMGB1P27-201ENST00000431429 KRTAP19-3Q7Z4W3 81 aa0.62□□□□□ -2.31
HMGB1P27-201ENST00000431429 ATOH7Q8N100 152 aa0.62□□□□□ -2.31
HMGB1P27-201ENST00000431429 LINC00308Q8TCZ7 52 aa0.62□□□□□ -2.31
HMGB1P27-201ENST00000431429 MUC5ACP98088 5654 aa0.62□□□□□ -2.31
HMGB1P27-201ENST00000431429 A0A1W2PPM0 123 aa0.61□□□□□ -2.31
HMGB1P27-201ENST00000431429 IFITM1P13164 125 aa0.61□□□□□ -2.31
HMGB1P27-201ENST00000431429 NPC2P61916 151 aa0.61□□□□□ -2.31
HMGB1P27-201ENST00000431429 BVES-AS1Q5T3Y7 98 aa0.61□□□□□ -2.31
HMGB1P27-201ENST00000431429 DMAC1Q96GE9 116 aa0.61□□□□□ -2.31
HMGB1P27-201ENST00000431429 SEC11CQ9BY50 192 aa0.61□□□□□ -2.31
HMGB1P27-201ENST00000431429 MUC16Q8WXI7 14507 aa0.6□□□□□ -2.31
HMGB1P27-201ENST00000431429 H3BUT2 72 aa0.6□□□□□ -2.31
HMGB1P27-201ENST00000431429 S100PP25815 95 aa0.6□□□□□ -2.31
HMGB1P27-201ENST00000431429 KRTAP20-2Q3LI61 65 aa0.6□□□□□ -2.31
HMGB1P27-201ENST00000431429 MUSTN1Q8IVN3 82 aa0.6□□□□□ -2.31
HMGB1P27-201ENST00000431429 C20orf197Q8N268 126 aa0.6□□□□□ -2.31
HMGB1P27-201ENST00000431429 IFI27L1Q96BM0 104 aa0.6□□□□□ -2.31
HMGB1P27-201ENST00000431429 LINC00472Q9H8W2 130 aa0.6□□□□□ -2.31
HMGB1P27-201ENST00000431429 MUC5BQ9HC84 5762 aaPredicted RBP0.6□□□□□ -2.31
HMGB1P27-201ENST00000431429 H0YGX0 51 aa0.59□□□□□ -2.31
HMGB1P27-201ENST00000431429 CCDC179H3BU77 68 aa0.59□□□□□ -2.31
HMGB1P27-201ENST00000431429 NDUFC1O43677 76 aa0.59□□□□□ -2.31
HMGB1P27-201ENST00000431429 IGKCP01834 107 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms