RNA–Protein interactions for RNA: ENST00000431239.5

CHD1L-204, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 2,907 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-204ENST00000431239 H1FX-AS1Q4G0G2 97 aa9.62□□□□□ -0.87
CHD1L-204ENST00000431239 KRTAP17-1Q9BYP8 105 aa9.62□□□□□ -0.87
CHD1L-204ENST00000431239 RYR1P21817 5038 aa9.61□□□□□ -0.87
CHD1L-204ENST00000431239 KIAA1109Q2LD37 5005 aa9.6□□□□□ -0.87
CHD1L-204ENST00000431239 XP32Q5T750 250 aa9.58□□□□□ -0.88
CHD1L-204ENST00000431239 RPL37P61927 97 aaKnown RBP9.57□□□□□ -0.88
CHD1L-204ENST00000431239 CSAG1Q6PB30 78 aa9.54□□□□□ -0.88
CHD1L-204ENST00000431239 KRTAP3-3Q9BYR6 98 aa9.48□□□□□ -0.89
CHD1L-204ENST00000431239 LPAP08519 4548 aa9.46□□□□□ -0.9
CHD1L-204ENST00000431239 MT1HL1P0DM35 61 aa9.43□□□□□ -0.9
CHD1L-204ENST00000431239 S4R3F8 94 aa9.42□□□□□ -0.9
CHD1L-204ENST00000431239 LINC01554Q52M75 96 aa9.4□□□□□ -0.9
CHD1L-204ENST00000431239 LRP2P98164 4655 aa9.4□□□□□ -0.91
CHD1L-204ENST00000431239 KRTAP10-6P60371 365 aaPredicted RBP9.39□□□□□ -0.91
CHD1L-204ENST00000431239 A0A0D9SG42 100 aa9.37□□□□□ -0.91
CHD1L-204ENST00000431239 EPPK1P58107 5090 aaKnown RBP9.37□□□□□ -0.91
CHD1L-204ENST00000431239 KRTAP13-4Q3LI77 160 aa9.35□□□□□ -0.91
CHD1L-204ENST00000431239 K7ERS5 55 aa9.32□□□□□ -0.92
CHD1L-204ENST00000431239 KRTAP3-2Q9BYR7 98 aa9.32□□□□□ -0.92
CHD1L-204ENST00000431239 CRIPTQ9P021 101 aa9.32□□□□□ -0.92
CHD1L-204ENST00000431239 P0C880 135 aa9.3□□□□□ -0.92
CHD1L-204ENST00000431239 ABCA13Q86UQ4 5058 aa9.27□□□□□ -0.92
CHD1L-204ENST00000431239 KRTAP25-1Q3LHN0 102 aa9.21□□□□□ -0.93
CHD1L-204ENST00000431239 KRTAP4-5Q9BYR2 181 aa9.16□□□□□ -0.94
CHD1L-204ENST00000431239 TPRXLQ17RH7 258 aa9.16□□□□□ -0.94
CHD1L-204ENST00000431239 ROMO1P60602 79 aa9.11□□□□□ -0.95
CHD1L-204ENST00000431239 KRTAP12-2P59991 146 aa9.04□□□□□ -0.96
CHD1L-204ENST00000431239 SPINT4Q6UDR6 99 aa9.02□□□□□ -0.97
CHD1L-204ENST00000431239 C10orf95Q9H7T3 257 aa8.94□□□□□ -0.98
CHD1L-204ENST00000431239 KRTAP12-1P59990 96 aa8.94□□□□□ -0.98
CHD1L-204ENST00000431239 MUC17Q685J3 4493 aa8.85□□□□□ -0.99
CHD1L-204ENST00000431239 M0QZ58 72 aa8.84□□□□□ -0.99
CHD1L-204ENST00000431239 J3QL48 77 aa8.84□□□□□ -0.99
CHD1L-204ENST00000431239 HERC2O95714 4834 aa8.84□□□□□ -0.99
CHD1L-204ENST00000431239 SEC61BP60468 96 aaKnown RBP8.83□□□□□ -1
CHD1L-204ENST00000431239 KRTAP4-1Q9BYQ7 146 aa8.83□□□□□ -1
CHD1L-204ENST00000431239 R4GN34 69 aa8.77□□□□□ -1
CHD1L-204ENST00000431239 MUC2Q02817 5179 aa8.77□□□□□ -1.01
CHD1L-204ENST00000431239 LORP23490 312 aaPredicted RBP8.73□□□□□ -1.01
CHD1L-204ENST00000431239 KRTAP19-2Q3LHN2 52 aa8.56□□□□□ -1.04
CHD1L-204ENST00000431239 H3BS24 57 aa8.55□□□□□ -1.04
CHD1L-204ENST00000431239 HERC1Q15751 4861 aa8.51□□□□□ -1.05
CHD1L-204ENST00000431239 BIRC6Q9NR09 4857 aa8.45□□□□□ -1.06
CHD1L-204ENST00000431239 FLGP20930 4061 aaPredicted RBP8.41□□□□□ -1.06
CHD1L-204ENST00000431239 PCLOQ9Y6V0 5065 aa8.4□□□□□ -1.06
CHD1L-204ENST00000431239 KRTAP15-1Q3LI76 137 aa8.36□□□□□ -1.07
CHD1L-204ENST00000431239 CAMK2N1Q7Z7J9 78 aa8.35□□□□□ -1.07
CHD1L-204ENST00000431239 FAT4Q6V0I7 4981 aa8.33□□□□□ -1.08
CHD1L-204ENST00000431239 HMCN2Q8NDA2 5059 aa8.3□□□□□ -1.08
CHD1L-204ENST00000431239 NDUFAF8A1L188 74 aa8.25□□□□□ -1.09
CHD1L-204ENST00000431239 RNF213Q63HN8 5207 aa8.16□□□□□ -1.1
CHD1L-204ENST00000431239 LCE2CQ5TA81 110 aa8.09□□□□□ -1.11
CHD1L-204ENST00000431239 PLAC4Q8WY50 150 aa8.08□□□□□ -1.12
CHD1L-204ENST00000431239 UBR4Q5T4S7 5183 aa8.08□□□□□ -1.12
CHD1L-204ENST00000431239 M0R2T5 61 aa8.05□□□□□ -1.12
CHD1L-204ENST00000431239 PP632Q6XCG6 107 aa7.99□□□□□ -1.13
CHD1L-204ENST00000431239 TNP1P09430 55 aa7.95□□□□□ -1.14
CHD1L-204ENST00000431239 MT1HP80294 61 aa7.9□□□□□ -1.15
CHD1L-204ENST00000431239 KRTAP19-1Q8IUB9 90 aa7.9□□□□□ -1.15
CHD1L-204ENST00000431239 SPRR2GQ9BYE4 73 aa7.87□□□□□ -1.15
CHD1L-204ENST00000431239 KRTAP10-10P60014 251 aa7.82□□□□□ -1.16
CHD1L-204ENST00000431239 MT1FP04733 61 aa7.8□□□□□ -1.16
CHD1L-204ENST00000431239 MT2AP02795 61 aa7.77□□□□□ -1.17
CHD1L-204ENST00000431239 KRTAP9-8Q9BYQ0 159 aa7.7□□□□□ -1.18
CHD1L-204ENST00000431239 LUZP6Q538Z0 58 aa7.69□□□□□ -1.18
CHD1L-204ENST00000431239 KRTAP23-1A1A580 65 aa7.64□□□□□ -1.19
CHD1L-204ENST00000431239 LCE3AQ5TA76 89 aa7.6□□□□□ -1.19
CHD1L-204ENST00000431239 KRTAP19-8Q3LI54 63 aa7.5□□□□□ -1.21
CHD1L-204ENST00000431239 MT1BP07438 61 aa7.49□□□□□ -1.21
CHD1L-204ENST00000431239 KRTAP10-5P60370 271 aa7.44□□□□□ -1.22
CHD1L-204ENST00000431239 MT1XP80297 61 aa7.44□□□□□ -1.22
CHD1L-204ENST00000431239 SPRR5A0A1B0GTR4 108 aa7.42□□□□□ -1.22
CHD1L-204ENST00000431239 KRTAP9-3Q9BYQ3 159 aa7.36□□□□□ -1.23
CHD1L-204ENST00000431239 KRTAP10-12P60413 245 aa7.3□□□□□ -1.24
CHD1L-204ENST00000431239 KRTAP8-1Q8IUC2 63 aa7.29□□□□□ -1.24
CHD1L-204ENST00000431239 KRTAP10-7P60409 375 aaPredicted RBP7.29□□□□□ -1.24
CHD1L-204ENST00000431239 USH2AO75445 5202 aa7.27□□□□□ -1.25
CHD1L-204ENST00000431239 A0A0A0MQY5 61 aa7.21□□□□□ -1.26
CHD1L-204ENST00000431239 KRTAP12-3P60328 96 aa7.21□□□□□ -1.26
CHD1L-204ENST00000431239 LCE2BO14633 110 aa7.13□□□□□ -1.27
CHD1L-204ENST00000431239 PRO2289Q9P1D8 64 aa7.12□□□□□ -1.27
CHD1L-204ENST00000431239 KMT2DO14686 5537 aa7.11□□□□□ -1.27
CHD1L-204ENST00000431239 KRTAP19-5Q3LI72 72 aa6.96□□□□□ -1.3
CHD1L-204ENST00000431239 LCE2AQ5TA79 106 aaPredicted RBP6.94□□□□□ -1.3
CHD1L-204ENST00000431239 KRTAP4-8A0A0G2JLE6 195 aa6.9□□□□□ -1.31
CHD1L-204ENST00000431239 KRTAP4-8Q9BYQ9 185 aa6.9□□□□□ -1.31
CHD1L-204ENST00000431239 LCE3CQ5T5A8 94 aa6.75□□□□□ -1.33
CHD1L-204ENST00000431239 FSIP2Q5CZC0 6907 aa6.71□□□□□ -1.34
CHD1L-204ENST00000431239 KRTAP19-7Q3SYF9 63 aa6.62□□□□□ -1.35
CHD1L-204ENST00000431239 KRTAP4-7Q9BYR0 210 aa6.61□□□□□ -1.35
CHD1L-204ENST00000431239 SSPOA2VEC9 5147 aa6.6□□□□□ -1.35
CHD1L-204ENST00000431239 KRTAP9-6A8MVA2 160 aa6.58□□□□□ -1.36
CHD1L-204ENST00000431239 INE1O15225 51 aa6.45□□□□□ -1.38
CHD1L-204ENST00000431239 MT1EP04732 61 aa6.42□□□□□ -1.38
CHD1L-204ENST00000431239 MT1LQ93083 61 aa6.42□□□□□ -1.38
CHD1L-204ENST00000431239 FCGBPQ9Y6R7 5405 aaPredicted RBP6.31□□□□□ -1.4
CHD1L-204ENST00000431239 KRTAP19-6Q3LI70 58 aa6.31□□□□□ -1.4
CHD1L-204ENST00000431239 MUC12Q9UKN1 5478 aa6.28□□□□□ -1.4
CHD1L-204ENST00000431239 KRTAP4-3Q9BYR4 195 aa6.21□□□□□ -1.42
CHD1L-204ENST00000431239 KRTAP2-3P0C7H8 128 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms