RNA–Protein interactions for RNA: ENST00000430804.5

LRRK2-204, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 1 (best)

Gene LRRK2, Length 6,400 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-204ENST00000430804 ZANQ9Y493 2812 aa1.82□□□□□ -2.12
LRRK2-204ENST00000430804 LCE3AQ5TA76 89 aa1.82□□□□□ -2.12
LRRK2-204ENST00000430804 CSMD2Q7Z408 3487 aa1.82□□□□□ -2.12
LRRK2-204ENST00000430804 INE1O15225 51 aa1.82□□□□□ -2.12
LRRK2-204ENST00000430804 SPRR5A0A1B0GTR4 108 aa1.82□□□□□ -2.12
LRRK2-204ENST00000430804 LCE2CQ5TA81 110 aa1.81□□□□□ -2.12
LRRK2-204ENST00000430804 KRTAP9-2Q9BYQ4 174 aa1.81□□□□□ -2.12
LRRK2-204ENST00000430804 CSMD1Q96PZ7 3565 aa1.81□□□□□ -2.12
LRRK2-204ENST00000430804 NBPF19A0A087WUL8 3843 aa1.79□□□□□ -2.12
LRRK2-204ENST00000430804 VPS13CQ709C8 3753 aa1.79□□□□□ -2.12
LRRK2-204ENST00000430804 KRTAP20-1Q3LI63 56 aa1.79□□□□□ -2.12
LRRK2-204ENST00000430804 OTOGQ6ZRI0 2925 aa1.77□□□□□ -2.13
LRRK2-204ENST00000430804 SPRR2GQ9BYE4 73 aa1.77□□□□□ -2.13
LRRK2-204ENST00000430804 ZNF469Q96JG9 3925 aaPredicted RBP1.77□□□□□ -2.13
LRRK2-204ENST00000430804 SVEP1Q4LDE5 3571 aa1.77□□□□□ -2.13
LRRK2-204ENST00000430804 LOC100996750A0A140TA64 210 aa1.76□□□□□ -2.13
LRRK2-204ENST00000430804 KRTAP4-6Q9BYQ5 205 aa1.76□□□□□ -2.13
LRRK2-204ENST00000430804 MT1FP04733 61 aa1.75□□□□□ -2.13
LRRK2-204ENST00000430804 FBN1P35555 2871 aaKnown RBP1.75□□□□□ -2.13
LRRK2-204ENST00000430804 AKAP9Q99996 3911 aa1.74□□□□□ -2.13
LRRK2-204ENST00000430804 KRTAP19-1Q8IUB9 90 aa1.74□□□□□ -2.13
LRRK2-204ENST00000430804 ZFHX3Q15911 3703 aa1.73□□□□□ -2.13
LRRK2-204ENST00000430804 KRTAP3-3Q9BYR6 98 aa1.73□□□□□ -2.13
LRRK2-204ENST00000430804 DNAH1Q9P2D7 4330 aa1.72□□□□□ -2.13
LRRK2-204ENST00000430804 KRTAP9-7A8MTY7 169 aa1.72□□□□□ -2.13
LRRK2-204ENST00000430804 KRTAP4-1Q9BYQ7 146 aa1.72□□□□□ -2.13
LRRK2-204ENST00000430804 HERC1Q15751 4861 aa1.72□□□□□ -2.13
LRRK2-204ENST00000430804 KRTAP3-2Q9BYR7 98 aa1.71□□□□□ -2.14
LRRK2-204ENST00000430804 MYCBP2O75592 4640 aa1.71□□□□□ -2.14
LRRK2-204ENST00000430804 CUBNO60494 3623 aa1.7□□□□□ -2.14
LRRK2-204ENST00000430804 MT1GP13640 62 aa1.69□□□□□ -2.14
LRRK2-204ENST00000430804 KRTAP19-5Q3LI72 72 aa1.69□□□□□ -2.14
LRRK2-204ENST00000430804 ANK3Q12955 4377 aaKnown RBP1.68□□□□□ -2.14
LRRK2-204ENST00000430804 LCE3BQ5TA77 95 aa1.68□□□□□ -2.14
LRRK2-204ENST00000430804 KRTAP2-3P0C7H8 128 aa1.67□□□□□ -2.14
LRRK2-204ENST00000430804 KRTAP2-4Q9BYR9 128 aa1.67□□□□□ -2.14
LRRK2-204ENST00000430804 DNAH11Q96DT5 4516 aa1.67□□□□□ -2.14
LRRK2-204ENST00000430804 KRTAP19-8Q3LI54 63 aa1.66□□□□□ -2.14
LRRK2-204ENST00000430804 COL7A1Q02388 2944 aa1.65□□□□□ -2.14
LRRK2-204ENST00000430804 PLECQ15149 4684 aaKnown RBP1.65□□□□□ -2.15
LRRK2-204ENST00000430804 DNHD1Q96M86 4753 aa1.64□□□□□ -2.15
LRRK2-204ENST00000430804 LRP1BQ9NZR2 4599 aa1.64□□□□□ -2.15
LRRK2-204ENST00000430804 LCE3CQ5T5A8 94 aa1.64□□□□□ -2.15
LRRK2-204ENST00000430804 MEGF8Q7Z7M0 2845 aa1.64□□□□□ -2.15
LRRK2-204ENST00000430804 MT4P47944 62 aa1.63□□□□□ -2.15
LRRK2-204ENST00000430804 DNAH10Q8IVF4 4471 aa1.63□□□□□ -2.15
LRRK2-204ENST00000430804 KRTAP6-3Q3LI67 103 aa1.62□□□□□ -2.15
LRRK2-204ENST00000430804 TRRAPQ9Y4A5 3859 aa1.62□□□□□ -2.15
LRRK2-204ENST00000430804 BIRC6Q9NR09 4857 aa1.62□□□□□ -2.15
LRRK2-204ENST00000430804 PCLOQ9Y6V0 5065 aa1.61□□□□□ -2.15
LRRK2-204ENST00000430804 LRP2P98164 4655 aa1.6□□□□□ -2.15
LRRK2-204ENST00000430804 KRTAP5-2Q701N4 177 aa1.6□□□□□ -2.15
LRRK2-204ENST00000430804 KRTAP19-6Q3LI70 58 aa1.59□□□□□ -2.16
LRRK2-204ENST00000430804 HERC2O95714 4834 aa1.59□□□□□ -2.16
LRRK2-204ENST00000430804 RYR1P21817 5038 aa1.59□□□□□ -2.16
LRRK2-204ENST00000430804 DNAH2Q9P225 4427 aa1.59□□□□□ -2.16
LRRK2-204ENST00000430804 LRP1Q07954 4544 aaKnown RBP1.59□□□□□ -2.16
LRRK2-204ENST00000430804 KRTAP2-2Q9BYT5 123 aa1.59□□□□□ -2.16
LRRK2-204ENST00000430804 KRTAP2-1Q9BYU5 128 aa1.59□□□□□ -2.16
LRRK2-204ENST00000430804 KRTAP19-3Q7Z4W3 81 aa1.58□□□□□ -2.16
LRRK2-204ENST00000430804 ANK2Q01484 3957 aa1.58□□□□□ -2.16
LRRK2-204ENST00000430804 MT3P25713 68 aa1.57□□□□□ -2.16
LRRK2-204ENST00000430804 CMYA5Q8N3K9 4069 aa1.56□□□□□ -2.16
LRRK2-204ENST00000430804 KRTAP9-3Q9BYQ3 159 aa1.56□□□□□ -2.16
LRRK2-204ENST00000430804 KRTAP9-8Q9BYQ0 159 aa1.55□□□□□ -2.16
LRRK2-204ENST00000430804 DNAH5Q8TE73 4624 aa1.55□□□□□ -2.16
LRRK2-204ENST00000430804 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.55□□□□□ -2.16
LRRK2-204ENST00000430804 PRKDCP78527 4128 aaKnown RBP1.54□□□□□ -2.16
LRRK2-204ENST00000430804 LCE4AQ5TA78 99 aa1.54□□□□□ -2.16
LRRK2-204ENST00000430804 DNAH3Q8TD57 4116 aa1.53□□□□□ -2.16
LRRK2-204ENST00000430804 DYNC1H1Q14204 4646 aaKnown RBP1.53□□□□□ -2.16
LRRK2-204ENST00000430804 FAT3Q8TDW7 4589 aa1.53□□□□□ -2.16
LRRK2-204ENST00000430804 KMT2CQ8NEZ4 4911 aaKnown RBP1.53□□□□□ -2.16
LRRK2-204ENST00000430804 LCE1AQ5T7P2 110 aa1.53□□□□□ -2.16
LRRK2-204ENST00000430804 MT1BP07438 61 aa1.52□□□□□ -2.17
LRRK2-204ENST00000430804 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.52□□□□□ -2.17
LRRK2-204ENST00000430804 HSPG2P98160 4391 aa1.51□□□□□ -2.17
LRRK2-204ENST00000430804 LCE3DQ9BYE3 92 aa1.51□□□□□ -2.17
LRRK2-204ENST00000430804 MT1XP80297 61 aa1.51□□□□□ -2.17
LRRK2-204ENST00000430804 LCE1BQ5T7P3 118 aa1.5□□□□□ -2.17
LRRK2-204ENST00000430804 EPPK1P58107 5090 aaKnown RBP1.5□□□□□ -2.17
LRRK2-204ENST00000430804 DNAH9Q9NYC9 4486 aa1.5□□□□□ -2.17
LRRK2-204ENST00000430804 LCE5AQ5TCM9 118 aa1.5□□□□□ -2.17
LRRK2-204ENST00000430804 LCE1DQ5T752 114 aa1.49□□□□□ -2.17
LRRK2-204ENST00000430804 CSMD3Q7Z407 3707 aa1.49□□□□□ -2.17
LRRK2-204ENST00000430804 RYR3Q15413 4870 aa1.48□□□□□ -2.17
LRRK2-204ENST00000430804 LCE3EQ5T5B0 92 aa1.48□□□□□ -2.17
LRRK2-204ENST00000430804 MT1LQ93083 61 aa1.47□□□□□ -2.17
LRRK2-204ENST00000430804 APOBP04114 4563 aaKnown RBP1.47□□□□□ -2.17
LRRK2-204ENST00000430804 DNAH17Q9UFH2 4485 aa1.46□□□□□ -2.18
LRRK2-204ENST00000430804 LCE2AQ5TA79 106 aaPredicted RBP1.46□□□□□ -2.18
LRRK2-204ENST00000430804 FAT1Q14517 4588 aa1.46□□□□□ -2.18
LRRK2-204ENST00000430804 PKHD1L1Q86WI1 4243 aa1.46□□□□□ -2.18
LRRK2-204ENST00000430804 DNAH8Q96JB1 4490 aa1.46□□□□□ -2.18
LRRK2-204ENST00000430804 STARD9Q9P2P6 4700 aa1.45□□□□□ -2.18
LRRK2-204ENST00000430804 SYNE2Q8WXH0 6885 aaKnown RBP1.45□□□□□ -2.18
LRRK2-204ENST00000430804 LYSTQ99698 3801 aa1.45□□□□□ -2.18
LRRK2-204ENST00000430804 DNAH7Q8WXX0 4024 aa1.45□□□□□ -2.18
LRRK2-204ENST00000430804 SACSQ9NZJ4 4579 aa1.44□□□□□ -2.18
LRRK2-204ENST00000430804 KRTAP4-8A0A0G2JLE6 195 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms