RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 KRTAP25-1Q3LHN0 102 aa7.1□□□□□ -1.27
SNRNP200-202ENST00000429650 FLG2Q5D862 2391 aaPredicted RBP7.09□□□□□ -1.27
SNRNP200-202ENST00000429650 K7ERS5 55 aa7.08□□□□□ -1.28
SNRNP200-202ENST00000429650 DMBT1Q9UGM3 2413 aaPredicted RBP7.06□□□□□ -1.28
SNRNP200-202ENST00000429650 RYR3Q15413 4870 aa7.05□□□□□ -1.28
SNRNP200-202ENST00000429650 FAT3Q8TDW7 4589 aa7.04□□□□□ -1.28
SNRNP200-202ENST00000429650 H0YAA0 97 aa7.03□□□□□ -1.28
SNRNP200-202ENST00000429650 COX6B2Q6YFQ2 88 aa7.02□□□□□ -1.29
SNRNP200-202ENST00000429650 TNXBP22105 4242 aa7.02□□□□□ -1.29
SNRNP200-202ENST00000429650 A0A1B0GU33 70 aa6.99□□□□□ -1.29
SNRNP200-202ENST00000429650 HSPG2P98160 4391 aa6.99□□□□□ -1.29
SNRNP200-202ENST00000429650 H1FX-AS1Q4G0G2 97 aa6.97□□□□□ -1.29
SNRNP200-202ENST00000429650 KRTAP10-8P60410 259 aa6.95□□□□□ -1.3
SNRNP200-202ENST00000429650 KIAA1109Q2LD37 5005 aa6.93□□□□□ -1.3
SNRNP200-202ENST00000429650 KRTAP17-1Q9BYP8 105 aa6.92□□□□□ -1.3
SNRNP200-202ENST00000429650 LPAP08519 4548 aa6.89□□□□□ -1.31
SNRNP200-202ENST00000429650 RPL37P61927 97 aaKnown RBP6.89□□□□□ -1.31
SNRNP200-202ENST00000429650 Q5VSD8 79 aa6.89□□□□□ -1.31
SNRNP200-202ENST00000429650 XP32Q5T750 250 aa6.85□□□□□ -1.31
SNRNP200-202ENST00000429650 KRTAP3-3Q9BYR6 98 aa6.84□□□□□ -1.31
SNRNP200-202ENST00000429650 RYR1P21817 5038 aa6.83□□□□□ -1.32
SNRNP200-202ENST00000429650 EPPK1P58107 5090 aaKnown RBP6.81□□□□□ -1.32
SNRNP200-202ENST00000429650 KRTAP10-6P60371 365 aaPredicted RBP6.8□□□□□ -1.32
SNRNP200-202ENST00000429650 SPINT4Q6UDR6 99 aa6.8□□□□□ -1.32
SNRNP200-202ENST00000429650 KRTAP15-1Q3LI76 137 aa6.78□□□□□ -1.32
SNRNP200-202ENST00000429650 LRP2P98164 4655 aa6.76□□□□□ -1.33
SNRNP200-202ENST00000429650 S4R3F8 94 aa6.76□□□□□ -1.33
SNRNP200-202ENST00000429650 KRTAP3-2Q9BYR7 98 aa6.74□□□□□ -1.33
SNRNP200-202ENST00000429650 ABCA13Q86UQ4 5058 aa6.74□□□□□ -1.33
SNRNP200-202ENST00000429650 MT1HL1P0DM35 61 aa6.73□□□□□ -1.33
SNRNP200-202ENST00000429650 KRTAP13-4Q3LI77 160 aa6.72□□□□□ -1.33
SNRNP200-202ENST00000429650 CAMK2N1Q7Z7J9 78 aa6.68□□□□□ -1.34
SNRNP200-202ENST00000429650 A0A0D9SG42 100 aa6.65□□□□□ -1.34
SNRNP200-202ENST00000429650 CRIPTQ9P021 101 aa6.61□□□□□ -1.35
SNRNP200-202ENST00000429650 TPRXLQ17RH7 258 aa6.59□□□□□ -1.36
SNRNP200-202ENST00000429650 KRTAP4-5Q9BYR2 181 aa6.57□□□□□ -1.36
SNRNP200-202ENST00000429650 KRTAP12-2P59991 146 aa6.5□□□□□ -1.37
SNRNP200-202ENST00000429650 MUC2Q02817 5179 aa6.48□□□□□ -1.37
SNRNP200-202ENST00000429650 KRTAP12-1P59990 96 aa6.46□□□□□ -1.38
SNRNP200-202ENST00000429650 M0QZ58 72 aa6.43□□□□□ -1.38
SNRNP200-202ENST00000429650 C10orf95Q9H7T3 257 aa6.39□□□□□ -1.39
SNRNP200-202ENST00000429650 HERC2O95714 4834 aa6.37□□□□□ -1.39
SNRNP200-202ENST00000429650 MUC17Q685J3 4493 aa6.36□□□□□ -1.39
SNRNP200-202ENST00000429650 KRTAP23-1A1A580 65 aa6.34□□□□□ -1.39
SNRNP200-202ENST00000429650 R4GN34 69 aa6.27□□□□□ -1.41
SNRNP200-202ENST00000429650 KRTAP4-1Q9BYQ7 146 aa6.27□□□□□ -1.41
SNRNP200-202ENST00000429650 HERC1Q15751 4861 aa6.23□□□□□ -1.41
SNRNP200-202ENST00000429650 LORP23490 312 aaPredicted RBP6.21□□□□□ -1.41
SNRNP200-202ENST00000429650 KRTAP19-2Q3LHN2 52 aa6.17□□□□□ -1.42
SNRNP200-202ENST00000429650 PRO2289Q9P1D8 64 aa6.14□□□□□ -1.43
SNRNP200-202ENST00000429650 PCLOQ9Y6V0 5065 aa6.14□□□□□ -1.43
SNRNP200-202ENST00000429650 FAT4Q6V0I7 4981 aa6.13□□□□□ -1.43
SNRNP200-202ENST00000429650 RNF213Q63HN8 5207 aa6.03□□□□□ -1.44
SNRNP200-202ENST00000429650 BIRC6Q9NR09 4857 aa6.03□□□□□ -1.44
SNRNP200-202ENST00000429650 FLGP20930 4061 aaPredicted RBP6.01□□□□□ -1.45
SNRNP200-202ENST00000429650 HMCN2Q8NDA2 5059 aa5.95□□□□□ -1.46
SNRNP200-202ENST00000429650 PLAC4Q8WY50 150 aa5.94□□□□□ -1.46
SNRNP200-202ENST00000429650 UBR4Q5T4S7 5183 aa5.92□□□□□ -1.46
SNRNP200-202ENST00000429650 PP632Q6XCG6 107 aa5.86□□□□□ -1.47
SNRNP200-202ENST00000429650 LCE2CQ5TA81 110 aa5.78□□□□□ -1.48
SNRNP200-202ENST00000429650 TNP1P09430 55 aa5.73□□□□□ -1.49
SNRNP200-202ENST00000429650 INE1O15225 51 aa5.69□□□□□ -1.5
SNRNP200-202ENST00000429650 SPRR2GQ9BYE4 73 aa5.69□□□□□ -1.5
SNRNP200-202ENST00000429650 KRTAP19-1Q8IUB9 90 aa5.66□□□□□ -1.5
SNRNP200-202ENST00000429650 M0R2T5 61 aa5.66□□□□□ -1.5
SNRNP200-202ENST00000429650 MT1HP80294 61 aa5.62□□□□□ -1.51
SNRNP200-202ENST00000429650 MT1FP04733 61 aa5.55□□□□□ -1.52
SNRNP200-202ENST00000429650 MT2AP02795 61 aa5.54□□□□□ -1.52
SNRNP200-202ENST00000429650 KRTAP10-10P60014 251 aa5.52□□□□□ -1.53
SNRNP200-202ENST00000429650 KRTAP9-8Q9BYQ0 159 aa5.5□□□□□ -1.53
SNRNP200-202ENST00000429650 SPRR5A0A1B0GTR4 108 aa5.48□□□□□ -1.53
SNRNP200-202ENST00000429650 LCE3AQ5TA76 89 aa5.44□□□□□ -1.54
SNRNP200-202ENST00000429650 KRTAP19-8Q3LI54 63 aa5.44□□□□□ -1.54
SNRNP200-202ENST00000429650 USH2AO75445 5202 aa5.4□□□□□ -1.54
SNRNP200-202ENST00000429650 MT1BP07438 61 aa5.37□□□□□ -1.55
SNRNP200-202ENST00000429650 KRTAP10-5P60370 271 aa5.34□□□□□ -1.55
SNRNP200-202ENST00000429650 MT1XP80297 61 aa5.33□□□□□ -1.56
SNRNP200-202ENST00000429650 KRTAP8-1Q8IUC2 63 aa5.31□□□□□ -1.56
SNRNP200-202ENST00000429650 KRTAP9-3Q9BYQ3 159 aa5.27□□□□□ -1.57
SNRNP200-202ENST00000429650 KMT2DO14686 5537 aa5.26□□□□□ -1.57
SNRNP200-202ENST00000429650 KRTAP10-12P60413 245 aa5.23□□□□□ -1.57
SNRNP200-202ENST00000429650 LCE2AQ5TA79 106 aaPredicted RBP5.19□□□□□ -1.58
SNRNP200-202ENST00000429650 KRTAP10-7P60409 375 aaPredicted RBP5.18□□□□□ -1.58
SNRNP200-202ENST00000429650 KRTAP12-3P60328 96 aa5.18□□□□□ -1.58
SNRNP200-202ENST00000429650 LCE2DQ5TA82 110 aaPredicted RBP5.15□□□□□ -1.59
SNRNP200-202ENST00000429650 FSIP2Q5CZC0 6907 aa5.06□□□□□ -1.6
SNRNP200-202ENST00000429650 LCE2BO14633 110 aa5.06□□□□□ -1.6
SNRNP200-202ENST00000429650 KRTAP9-6A0A140TA67 174 aa5.01□□□□□ -1.61
SNRNP200-202ENST00000429650 KRTAP19-5Q3LI72 72 aa4.96□□□□□ -1.61
SNRNP200-202ENST00000429650 KRTAP4-8A0A0G2JLE6 195 aa4.93□□□□□ -1.62
SNRNP200-202ENST00000429650 KRTAP4-8Q9BYQ9 185 aa4.93□□□□□ -1.62
SNRNP200-202ENST00000429650 LCE3CQ5T5A8 94 aa4.88□□□□□ -1.63
SNRNP200-202ENST00000429650 SSPOA2VEC9 5147 aa4.79□□□□□ -1.64
SNRNP200-202ENST00000429650 KRTAP19-7Q3SYF9 63 aa4.76□□□□□ -1.65
SNRNP200-202ENST00000429650 KRTAP9-2Q9BYQ4 174 aa4.74□□□□□ -1.65
SNRNP200-202ENST00000429650 KRTAP4-7Q9BYR0 210 aa4.73□□□□□ -1.65
SNRNP200-202ENST00000429650 KRTAP9-6A8MVA2 160 aa4.71□□□□□ -1.66
SNRNP200-202ENST00000429650 MUC12Q9UKN1 5478 aa4.62□□□□□ -1.67
SNRNP200-202ENST00000429650 MT1EP04732 61 aa4.61□□□□□ -1.67
SNRNP200-202ENST00000429650 MT1LQ93083 61 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms