RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 PMAIP1Q13794 54 aa8.42□□□□□ -1.06
MBD4-203ENST00000429544 SEC61GP60059 68 aa8.4□□□□□ -1.07
MBD4-203ENST00000429544 UQCR11O14957 56 aa8.38□□□□□ -1.07
MBD4-203ENST00000429544 MIR22HGQ0VDD5 57 aa8.35□□□□□ -1.07
MBD4-203ENST00000429544 SPATA8Q6RVD6 105 aa8.35□□□□□ -1.07
MBD4-203ENST00000429544 TPRXLQ17RH7 258 aa8.34□□□□□ -1.08
MBD4-203ENST00000429544 A6NN06 94 aa8.31□□□□□ -1.08
MBD4-203ENST00000429544 LRP2P98164 4655 aa8.23□□□□□ -1.09
MBD4-203ENST00000429544 S4R3F8 94 aa8.22□□□□□ -1.09
MBD4-203ENST00000429544 ABCA13Q86UQ4 5058 aa8.22□□□□□ -1.09
MBD4-203ENST00000429544 LPAP08519 4548 aa8.22□□□□□ -1.09
MBD4-203ENST00000429544 A0A1B0GU33 70 aa8.2□□□□□ -1.1
MBD4-203ENST00000429544 H1FX-AS1Q4G0G2 97 aa8.19□□□□□ -1.1
MBD4-203ENST00000429544 H0YAA0 97 aa8.18□□□□□ -1.1
MBD4-203ENST00000429544 KTN1-AS1Q86SY8 53 aa8.18□□□□□ -1.1
MBD4-203ENST00000429544 RBM12B-AS1Q9P1G2 102 aa8.1□□□□□ -1.11
MBD4-203ENST00000429544 HERC2O95714 4834 aa8.08□□□□□ -1.12
MBD4-203ENST00000429544 KRTAP10-6P60371 365 aaPredicted RBP8.06□□□□□ -1.12
MBD4-203ENST00000429544 BIRC6Q9NR09 4857 aa8.04□□□□□ -1.12
MBD4-203ENST00000429544 SEC61BP60468 96 aaKnown RBP8.04□□□□□ -1.12
MBD4-203ENST00000429544 P0C880 135 aa7.97□□□□□ -1.13
MBD4-203ENST00000429544 KRTAP13-4Q3LI77 160 aa7.95□□□□□ -1.14
MBD4-203ENST00000429544 CSAG1Q6PB30 78 aa7.95□□□□□ -1.14
MBD4-203ENST00000429544 ADM2Q7Z4H4 148 aa7.95□□□□□ -1.14
MBD4-203ENST00000429544 KRTAP4-1Q9BYQ7 146 aa7.94□□□□□ -1.14
MBD4-203ENST00000429544 PRAC1Q96KF2 57 aa7.93□□□□□ -1.14
MBD4-203ENST00000429544 MUC17Q685J3 4493 aa7.93□□□□□ -1.14
MBD4-203ENST00000429544 LCE2BO14633 110 aa7.88□□□□□ -1.15
MBD4-203ENST00000429544 A0A0D9SG42 100 aa7.87□□□□□ -1.15
MBD4-203ENST00000429544 K7ERS5 55 aa7.85□□□□□ -1.15
MBD4-203ENST00000429544 KRTAP19-2Q3LHN2 52 aa7.74□□□□□ -1.17
MBD4-203ENST00000429544 PCLOQ9Y6V0 5065 aa7.7□□□□□ -1.18
MBD4-203ENST00000429544 M0QZ58 72 aa7.69□□□□□ -1.18
MBD4-203ENST00000429544 HERC1Q15751 4861 aa7.68□□□□□ -1.18
MBD4-203ENST00000429544 KRTAP12-2P59991 146 aa7.66□□□□□ -1.18
MBD4-203ENST00000429544 KRTAP12-1P59990 96 aa7.63□□□□□ -1.19
MBD4-203ENST00000429544 ROMO1P60602 79 aa7.62□□□□□ -1.19
MBD4-203ENST00000429544 SPINT4Q6UDR6 99 aa7.62□□□□□ -1.19
MBD4-203ENST00000429544 HMCN2Q8NDA2 5059 aa7.62□□□□□ -1.19
MBD4-203ENST00000429544 LCE2CQ5TA81 110 aa7.6□□□□□ -1.19
MBD4-203ENST00000429544 R4GN34 69 aa7.59□□□□□ -1.19
MBD4-203ENST00000429544 LORP23490 312 aaPredicted RBP7.57□□□□□ -1.2
MBD4-203ENST00000429544 MUC2Q02817 5179 aa7.57□□□□□ -1.2
MBD4-203ENST00000429544 FLGP20930 4061 aaPredicted RBP7.56□□□□□ -1.2
MBD4-203ENST00000429544 LINC01554Q52M75 96 aa7.56□□□□□ -1.2
MBD4-203ENST00000429544 CRIPTQ9P021 101 aa7.56□□□□□ -1.2
MBD4-203ENST00000429544 KRTAP25-1Q3LHN0 102 aa7.56□□□□□ -1.2
MBD4-203ENST00000429544 LCE2AQ5TA79 106 aaPredicted RBP7.45□□□□□ -1.22
MBD4-203ENST00000429544 C10orf95Q9H7T3 257 aa7.35□□□□□ -1.23
MBD4-203ENST00000429544 RNF213Q63HN8 5207 aa7.27□□□□□ -1.25
MBD4-203ENST00000429544 FAT4Q6V0I7 4981 aa7.24□□□□□ -1.25
MBD4-203ENST00000429544 M0R2T5 61 aa7.23□□□□□ -1.25
MBD4-203ENST00000429544 UBR4Q5T4S7 5183 aa7.23□□□□□ -1.25
MBD4-203ENST00000429544 MT1HP80294 61 aa7.23□□□□□ -1.25
MBD4-203ENST00000429544 CAMK2N1Q7Z7J9 78 aa7.18□□□□□ -1.26
MBD4-203ENST00000429544 H3BS24 57 aa7.13□□□□□ -1.27
MBD4-203ENST00000429544 SPRR2GQ9BYE4 73 aa7.06□□□□□ -1.28
MBD4-203ENST00000429544 MT2AP02795 61 aa7.05□□□□□ -1.28
MBD4-203ENST00000429544 KRTAP19-1Q8IUB9 90 aa7.05□□□□□ -1.28
MBD4-203ENST00000429544 MT1FP04733 61 aa7.04□□□□□ -1.28
MBD4-203ENST00000429544 KRTAP10-10P60014 251 aa7.03□□□□□ -1.28
MBD4-203ENST00000429544 KRTAP9-8Q9BYQ0 159 aa7.01□□□□□ -1.29
MBD4-203ENST00000429544 PLAC4Q8WY50 150 aa6.95□□□□□ -1.3
MBD4-203ENST00000429544 TNP1P09430 55 aa6.87□□□□□ -1.31
MBD4-203ENST00000429544 PP632Q6XCG6 107 aa6.84□□□□□ -1.31
MBD4-203ENST00000429544 KRTAP19-8Q3LI54 63 aa6.81□□□□□ -1.32
MBD4-203ENST00000429544 KRTAP15-1Q3LI76 137 aa6.81□□□□□ -1.32
MBD4-203ENST00000429544 MT1BP07438 61 aa6.74□□□□□ -1.33
MBD4-203ENST00000429544 KRTAP9-3Q9BYQ3 159 aa6.73□□□□□ -1.33
MBD4-203ENST00000429544 KRTAP23-1A1A580 65 aa6.69□□□□□ -1.34
MBD4-203ENST00000429544 MT1XP80297 61 aa6.62□□□□□ -1.35
MBD4-203ENST00000429544 KRTAP10-5P60370 271 aa6.61□□□□□ -1.35
MBD4-203ENST00000429544 LCE3AQ5TA76 89 aa6.56□□□□□ -1.36
MBD4-203ENST00000429544 NDUFAF8A1L188 74 aa6.51□□□□□ -1.37
MBD4-203ENST00000429544 PRO2289Q9P1D8 64 aa6.42□□□□□ -1.38
MBD4-203ENST00000429544 KRTAP10-7P60409 375 aaPredicted RBP6.41□□□□□ -1.38
MBD4-203ENST00000429544 KRTAP10-12P60413 245 aa6.41□□□□□ -1.38
MBD4-203ENST00000429544 KRTAP8-1Q8IUC2 63 aa6.37□□□□□ -1.39
MBD4-203ENST00000429544 LUZP6Q538Z0 58 aa6.27□□□□□ -1.4
MBD4-203ENST00000429544 SPRR5A0A1B0GTR4 108 aa6.26□□□□□ -1.41
MBD4-203ENST00000429544 KRTAP12-3P60328 96 aa6.25□□□□□ -1.41
MBD4-203ENST00000429544 USH2AO75445 5202 aa6.25□□□□□ -1.41
MBD4-203ENST00000429544 KRTAP19-5Q3LI72 72 aa6.1□□□□□ -1.43
MBD4-203ENST00000429544 KRTAP4-8A0A0G2JLE6 195 aa6.07□□□□□ -1.44
MBD4-203ENST00000429544 KRTAP4-8Q9BYQ9 185 aa6.07□□□□□ -1.44
MBD4-203ENST00000429544 SSPOA2VEC9 5147 aa6.04□□□□□ -1.44
MBD4-203ENST00000429544 KMT2DO14686 5537 aa6.03□□□□□ -1.44
MBD4-203ENST00000429544 KRTAP19-6Q3LI70 58 aa5.94□□□□□ -1.46
MBD4-203ENST00000429544 KRTAP19-7Q3SYF9 63 aa5.89□□□□□ -1.47
MBD4-203ENST00000429544 LCE3CQ5T5A8 94 aa5.86□□□□□ -1.47
MBD4-203ENST00000429544 FSIP2Q5CZC0 6907 aa5.8□□□□□ -1.48
MBD4-203ENST00000429544 MT1EP04732 61 aa5.76□□□□□ -1.49
MBD4-203ENST00000429544 A0A0A0MQY5 61 aa5.73□□□□□ -1.49
MBD4-203ENST00000429544 MT1LQ93083 61 aa5.71□□□□□ -1.5
MBD4-203ENST00000429544 KRTAP4-7Q9BYR0 210 aa5.68□□□□□ -1.5
MBD4-203ENST00000429544 FCGBPQ9Y6R7 5405 aaPredicted RBP5.64□□□□□ -1.51
MBD4-203ENST00000429544 KRTAP9-6A8MVA2 160 aa5.62□□□□□ -1.51
MBD4-203ENST00000429544 KRTAP19-4Q3LI73 84 aa5.61□□□□□ -1.51
MBD4-203ENST00000429544 LOC100996750A0A140TA64 210 aa5.54□□□□□ -1.52
MBD4-203ENST00000429544 KRTAP4-6Q9BYQ5 205 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms