RNA–Protein interactions for RNA: ENST00000429205.6

SENP3-202, Transcript of SUMO specific peptidase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SENP3, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-202ENST00000429205 PKHD1L1Q86WI1 4243 aa7.49□□□□□ -1.21
SENP3-202ENST00000429205 KRTAP17-1Q9BYP8 105 aa7.48□□□□□ -1.21
SENP3-202ENST00000429205 CAMK2N1Q7Z7J9 78 aa7.47□□□□□ -1.21
SENP3-202ENST00000429205 LRP1Q07954 4544 aaKnown RBP7.45□□□□□ -1.22
SENP3-202ENST00000429205 RPS29P62273 56 aaKnown RBP7.43□□□□□ -1.22
SENP3-202ENST00000429205 H0YAA0 97 aa7.43□□□□□ -1.22
SENP3-202ENST00000429205 TNXBP22105 4242 aa7.38□□□□□ -1.23
SENP3-202ENST00000429205 FLG2Q5D862 2391 aaPredicted RBP7.37□□□□□ -1.23
SENP3-202ENST00000429205 Q8N1X5 172 aa7.37□□□□□ -1.23
SENP3-202ENST00000429205 MYCBP2O75592 4640 aa7.35□□□□□ -1.23
SENP3-202ENST00000429205 KRTAP10-8P60410 259 aa7.35□□□□□ -1.23
SENP3-202ENST00000429205 FAT3Q8TDW7 4589 aa7.34□□□□□ -1.23
SENP3-202ENST00000429205 IGKV2-30P06310 120 aa7.31□□□□□ -1.24
SENP3-202ENST00000429205 A0A1B0GU33 70 aa7.28□□□□□ -1.24
SENP3-202ENST00000429205 TPRXLQ17RH7 258 aa7.27□□□□□ -1.25
SENP3-202ENST00000429205 DMBT1Q9UGM3 2413 aaPredicted RBP7.27□□□□□ -1.25
SENP3-202ENST00000429205 C9orf92A6NGG3 77 aa7.25□□□□□ -1.25
SENP3-202ENST00000429205 KRTAP4-5Q9BYR2 181 aa7.25□□□□□ -1.25
SENP3-202ENST00000429205 IGKV2D-30A0A075B6S6 120 aa7.25□□□□□ -1.25
SENP3-202ENST00000429205 H1FX-AS1Q4G0G2 97 aa7.24□□□□□ -1.25
SENP3-202ENST00000429205 MT1HL1P0DM35 61 aa7.24□□□□□ -1.25
SENP3-202ENST00000429205 COX6B2Q6YFQ2 88 aa7.23□□□□□ -1.25
SENP3-202ENST00000429205 CRIPTQ9P021 101 aa7.22□□□□□ -1.25
SENP3-202ENST00000429205 BIRC6Q9NR09 4857 aa7.15□□□□□ -1.26
SENP3-202ENST00000429205 ABCA13Q86UQ4 5058 aa7.15□□□□□ -1.27
SENP3-202ENST00000429205 HERC2O95714 4834 aa7.1□□□□□ -1.27
SENP3-202ENST00000429205 RPL37P61927 97 aaKnown RBP7.05□□□□□ -1.28
SENP3-202ENST00000429205 XP32Q5T750 250 aa7.01□□□□□ -1.29
SENP3-202ENST00000429205 LPAP08519 4548 aa6.96□□□□□ -1.3
SENP3-202ENST00000429205 PRO2289Q9P1D8 64 aa6.94□□□□□ -1.3
SENP3-202ENST00000429205 PLAC4Q8WY50 150 aa6.91□□□□□ -1.3
SENP3-202ENST00000429205 LRP2P98164 4655 aa6.91□□□□□ -1.3
SENP3-202ENST00000429205 C10orf95Q9H7T3 257 aa6.9□□□□□ -1.3
SENP3-202ENST00000429205 PCLOQ9Y6V0 5065 aa6.86□□□□□ -1.31
SENP3-202ENST00000429205 KRTAP3-1Q9BYR8 98 aa6.83□□□□□ -1.32
SENP3-202ENST00000429205 HERC1Q15751 4861 aa6.77□□□□□ -1.33
SENP3-202ENST00000429205 KRTAP3-2Q9BYR7 98 aa6.73□□□□□ -1.33
SENP3-202ENST00000429205 S4R3F8 94 aa6.66□□□□□ -1.34
SENP3-202ENST00000429205 HMCN2Q8NDA2 5059 aa6.66□□□□□ -1.34
SENP3-202ENST00000429205 INE1O15225 51 aa6.63□□□□□ -1.35
SENP3-202ENST00000429205 KRTAP23-1A1A580 65 aa6.62□□□□□ -1.35
SENP3-202ENST00000429205 MUC17Q685J3 4493 aa6.6□□□□□ -1.35
SENP3-202ENST00000429205 KRTAP4-1Q9BYQ7 146 aa6.6□□□□□ -1.35
SENP3-202ENST00000429205 KRTAP13-4Q3LI77 160 aa6.59□□□□□ -1.35
SENP3-202ENST00000429205 KRTAP10-6P60371 365 aaPredicted RBP6.58□□□□□ -1.36
SENP3-202ENST00000429205 KRTAP3-3Q9BYR6 98 aa6.57□□□□□ -1.36
SENP3-202ENST00000429205 R4GN34 69 aa6.57□□□□□ -1.36
SENP3-202ENST00000429205 A0A0D9SG42 100 aa6.55□□□□□ -1.36
SENP3-202ENST00000429205 MUC2Q02817 5179 aa6.54□□□□□ -1.36
SENP3-202ENST00000429205 KRTAP12-2P59991 146 aa6.44□□□□□ -1.38
SENP3-202ENST00000429205 KRTAP12-1P59990 96 aa6.42□□□□□ -1.38
SENP3-202ENST00000429205 KRTAP19-2Q3LHN2 52 aa6.42□□□□□ -1.38
SENP3-202ENST00000429205 PP632Q6XCG6 107 aa6.41□□□□□ -1.38
SENP3-202ENST00000429205 UBR4Q5T4S7 5183 aa6.4□□□□□ -1.38
SENP3-202ENST00000429205 SPRR5A0A1B0GTR4 108 aa6.35□□□□□ -1.39
SENP3-202ENST00000429205 RNF213Q63HN8 5207 aa6.31□□□□□ -1.4
SENP3-202ENST00000429205 FLGP20930 4061 aaPredicted RBP6.3□□□□□ -1.4
SENP3-202ENST00000429205 M0QZ58 72 aa6.26□□□□□ -1.41
SENP3-202ENST00000429205 FAT4Q6V0I7 4981 aa6.26□□□□□ -1.41
SENP3-202ENST00000429205 LCE2CQ5TA81 110 aa6.23□□□□□ -1.41
SENP3-202ENST00000429205 LORP23490 312 aaPredicted RBP6.1□□□□□ -1.43
SENP3-202ENST00000429205 MT1HP80294 61 aa6.09□□□□□ -1.43
SENP3-202ENST00000429205 M0R2T5 61 aa6.09□□□□□ -1.44
SENP3-202ENST00000429205 MT2AP02795 61 aa5.88□□□□□ -1.47
SENP3-202ENST00000429205 KRTAP9-8Q9BYQ0 159 aa5.88□□□□□ -1.47
SENP3-202ENST00000429205 MT1FP04733 61 aa5.86□□□□□ -1.47
SENP3-202ENST00000429205 KRTAP10-10P60014 251 aa5.84□□□□□ -1.47
SENP3-202ENST00000429205 KRTAP19-1Q8IUB9 90 aa5.8□□□□□ -1.48
SENP3-202ENST00000429205 SPRR2GQ9BYE4 73 aa5.8□□□□□ -1.48
SENP3-202ENST00000429205 LCE2AQ5TA79 106 aaPredicted RBP5.75□□□□□ -1.49
SENP3-202ENST00000429205 KRTAP9-3Q9BYQ3 159 aa5.66□□□□□ -1.5
SENP3-202ENST00000429205 KRTAP19-8Q3LI54 63 aa5.62□□□□□ -1.51
SENP3-202ENST00000429205 MT1BP07438 61 aa5.56□□□□□ -1.52
SENP3-202ENST00000429205 TNP1P09430 55 aa5.55□□□□□ -1.52
SENP3-202ENST00000429205 LCE2BO14633 110 aa5.5□□□□□ -1.53
SENP3-202ENST00000429205 USH2AO75445 5202 aa5.43□□□□□ -1.54
SENP3-202ENST00000429205 MT1XP80297 61 aa5.42□□□□□ -1.54
SENP3-202ENST00000429205 KRTAP10-5P60370 271 aa5.41□□□□□ -1.54
SENP3-202ENST00000429205 KRTAP10-7P60409 375 aaPredicted RBP5.23□□□□□ -1.57
SENP3-202ENST00000429205 FSIP2Q5CZC0 6907 aa5.21□□□□□ -1.57
SENP3-202ENST00000429205 SSPOA2VEC9 5147 aa5.21□□□□□ -1.58
SENP3-202ENST00000429205 LCE3AQ5TA76 89 aa5.21□□□□□ -1.58
SENP3-202ENST00000429205 KRTAP10-12P60413 245 aa5.16□□□□□ -1.58
SENP3-202ENST00000429205 KRTAP9-2Q9BYQ4 174 aa5.16□□□□□ -1.58
SENP3-202ENST00000429205 LCE2DQ5TA82 110 aaPredicted RBP5.13□□□□□ -1.59
SENP3-202ENST00000429205 KRTAP19-6Q3LI70 58 aa5.09□□□□□ -1.59
SENP3-202ENST00000429205 KMT2DO14686 5537 aa5.07□□□□□ -1.6
SENP3-202ENST00000429205 KRTAP8-1Q8IUC2 63 aa5.07□□□□□ -1.6
SENP3-202ENST00000429205 KRTAP4-8A0A0G2JLE6 195 aa5.01□□□□□ -1.61
SENP3-202ENST00000429205 KRTAP4-8Q9BYQ9 185 aa5.01□□□□□ -1.61
SENP3-202ENST00000429205 KRTAP12-3P60328 96 aa4.98□□□□□ -1.61
SENP3-202ENST00000429205 FCGBPQ9Y6R7 5405 aaPredicted RBP4.95□□□□□ -1.62
SENP3-202ENST00000429205 KRTAP19-5Q3LI72 72 aa4.93□□□□□ -1.62
SENP3-202ENST00000429205 KRTAP2-2Q9BYT5 123 aa4.91□□□□□ -1.62
SENP3-202ENST00000429205 CRCT1Q9UGL9 99 aa4.91□□□□□ -1.62
SENP3-202ENST00000429205 KRTAP9-6A0A140TA67 174 aa4.89□□□□□ -1.63
SENP3-202ENST00000429205 KRTAP2-3P0C7H8 128 aa4.84□□□□□ -1.63
SENP3-202ENST00000429205 KRTAP2-4Q9BYR9 128 aa4.84□□□□□ -1.63
SENP3-202ENST00000429205 KRTAP2-1Q9BYU5 128 aa4.84□□□□□ -1.63
SENP3-202ENST00000429205 KRTAP19-7Q3SYF9 63 aa4.84□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms