RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 A0A087WVE0 104 aa6.84□□□□□ -1.31
SEC13-210ENST00000428626 TP53AIP1Q9HCN2 124 aa6.81□□□□□ -1.32
SEC13-210ENST00000428626 FAM240AA0A1B0GVK7 77 aa6.79□□□□□ -1.32
SEC13-210ENST00000428626 ACYP1P07311 99 aa6.78□□□□□ -1.32
SEC13-210ENST00000428626 KRTAP5-9P26371 169 aa6.78□□□□□ -1.32
SEC13-210ENST00000428626 CYP4F30PQ9H0H9 118 aa6.78□□□□□ -1.32
SEC13-210ENST00000428626 KMT2DO14686 5537 aa6.76□□□□□ -1.33
SEC13-210ENST00000428626 KRTAP20-1Q3LI63 56 aa6.71□□□□□ -1.34
SEC13-210ENST00000428626 MDN1Q9NU22 5596 aa6.69□□□□□ -1.34
SEC13-210ENST00000428626 CRIPTQ9P021 101 aa6.69□□□□□ -1.34
SEC13-210ENST00000428626 TRAV22A0A0B4J277 110 aa6.68□□□□□ -1.34
SEC13-210ENST00000428626 LOC101927531A0A1B0GV80 90 aa6.65□□□□□ -1.34
SEC13-210ENST00000428626 IMUPQ9GZP8 106 aa6.65□□□□□ -1.34
SEC13-210ENST00000428626 LINC00643Q86TS7 51 aa6.63□□□□□ -1.35
SEC13-210ENST00000428626 ATP5EP2Q5VTU8 51 aa6.62□□□□□ -1.35
SEC13-210ENST00000428626 H0YAA0 97 aa6.6□□□□□ -1.35
SEC13-210ENST00000428626 NDUFC1O43677 76 aa6.57□□□□□ -1.36
SEC13-210ENST00000428626 H0Y9P7 68 aa6.56□□□□□ -1.36
SEC13-210ENST00000428626 MT1XP80297 61 aa6.56□□□□□ -1.36
SEC13-210ENST00000428626 ADM2Q7Z4H4 148 aa6.55□□□□□ -1.36
SEC13-210ENST00000428626 UQCRQO14949 82 aa6.54□□□□□ -1.36
SEC13-210ENST00000428626 MT-ATP8P03928 68 aa6.52□□□□□ -1.37
SEC13-210ENST00000428626 HIST1H4AP62805 103 aaKnown RBP6.51□□□□□ -1.37
SEC13-210ENST00000428626 SPRR2FQ96RM1 72 aa6.51□□□□□ -1.37
SEC13-210ENST00000428626 A8MUN3 132 aa6.5□□□□□ -1.37
SEC13-210ENST00000428626 ATOX1O00244 68 aa6.5□□□□□ -1.37
SEC13-210ENST00000428626 KRTAP2-3P0C7H8 128 aa6.48□□□□□ -1.37
SEC13-210ENST00000428626 KRTAP2-4Q9BYR9 128 aa6.48□□□□□ -1.37
SEC13-210ENST00000428626 SPRR2EP22531 72 aa6.46□□□□□ -1.38
SEC13-210ENST00000428626 SPRR2BP35325 72 aa6.46□□□□□ -1.38
SEC13-210ENST00000428626 SPRR2AP35326 72 aa6.46□□□□□ -1.38
SEC13-210ENST00000428626 LINC00208Q96KT6 92 aa6.44□□□□□ -1.38
SEC13-210ENST00000428626 PRO2289Q9P1D8 64 aa6.44□□□□□ -1.38
SEC13-210ENST00000428626 P0C880 135 aa6.43□□□□□ -1.38
SEC13-210ENST00000428626 SCGB1A1P11684 91 aa6.42□□□□□ -1.38
SEC13-210ENST00000428626 KRTAP8-1Q8IUC2 63 aa6.4□□□□□ -1.38
SEC13-210ENST00000428626 PLAC4Q8WY50 150 aa6.4□□□□□ -1.38
SEC13-210ENST00000428626 LCE1AQ5T7P2 110 aa6.39□□□□□ -1.39
SEC13-210ENST00000428626 KRTAP12-2P59991 146 aa6.38□□□□□ -1.39
SEC13-210ENST00000428626 OCR1Q9BZK8 76 aa6.38□□□□□ -1.39
SEC13-210ENST00000428626 SVIPQ8NHG7 77 aa6.37□□□□□ -1.39
SEC13-210ENST00000428626 KRTAP4-8A0A0G2JLE6 195 aa6.36□□□□□ -1.39
SEC13-210ENST00000428626 KRTAP4-8Q9BYQ9 185 aa6.36□□□□□ -1.39
SEC13-210ENST00000428626 R4GN34 69 aa6.36□□□□□ -1.39
SEC13-210ENST00000428626 M0QZ58 72 aa6.32□□□□□ -1.4
SEC13-210ENST00000428626 SMIM20Q8N5G0 67 aa6.32□□□□□ -1.4
SEC13-210ENST00000428626 MP68P56378 58 aa6.31□□□□□ -1.4
SEC13-210ENST00000428626 DMAC1Q96GE9 116 aa6.27□□□□□ -1.41
SEC13-210ENST00000428626 KRTAP10-7P60409 375 aaPredicted RBP6.26□□□□□ -1.41
SEC13-210ENST00000428626 KRTAP2-2Q9BYT5 123 aa6.26□□□□□ -1.41
SEC13-210ENST00000428626 KRTAP2-1Q9BYU5 128 aa6.26□□□□□ -1.41
SEC13-210ENST00000428626 LINC01554Q52M75 96 aa6.25□□□□□ -1.41
SEC13-210ENST00000428626 C20orf197Q8N268 126 aa6.25□□□□□ -1.41
SEC13-210ENST00000428626 ANAPC13Q9BS18 74 aa6.25□□□□□ -1.41
SEC13-210ENST00000428626 TRAV7A0A075B6U4 112 aa6.24□□□□□ -1.41
SEC13-210ENST00000428626 SPRR2DP22532 72 aa6.24□□□□□ -1.41
SEC13-210ENST00000428626 SERP2Q8N6R1 65 aa6.23□□□□□ -1.41
SEC13-210ENST00000428626 H3BPC8 53 aa6.2□□□□□ -1.42
SEC13-210ENST00000428626 KRTAP10-12P60413 245 aa6.2□□□□□ -1.42
SEC13-210ENST00000428626 H3BS24 57 aa6.19□□□□□ -1.42
SEC13-210ENST00000428626 COX7CP15954 63 aa6.18□□□□□ -1.42
SEC13-210ENST00000428626 PCP4P48539 62 aa6.16□□□□□ -1.42
SEC13-210ENST00000428626 LCE3BQ5TA77 95 aa6.09□□□□□ -1.43
SEC13-210ENST00000428626 CCDC179H3BU77 68 aa6.07□□□□□ -1.44
SEC13-210ENST00000428626 ACYP2P14621 99 aa6.03□□□□□ -1.44
SEC13-210ENST00000428626 SNURFQ9Y675 71 aa6.02□□□□□ -1.45
SEC13-210ENST00000428626 H7BZZ5 65 aa5.96□□□□□ -1.46
SEC13-210ENST00000428626 KRTAP13-4Q3LI77 160 aa5.95□□□□□ -1.46
SEC13-210ENST00000428626 SPTSSBQ8NFR3 76 aa5.94□□□□□ -1.46
SEC13-210ENST00000428626 CYSTM1Q9H1C7 97 aa5.94□□□□□ -1.46
SEC13-210ENST00000428626 TMEM258P61165 79 aa5.93□□□□□ -1.46
SEC13-210ENST00000428626 ATP5EP56381 51 aaPredicted RBP5.92□□□□□ -1.46
SEC13-210ENST00000428626 SPANXA2-OT1Q8N9U9 137 aa5.92□□□□□ -1.46
SEC13-210ENST00000428626 CHKB-CPT1BH3BT56 60 aa5.89□□□□□ -1.47
SEC13-210ENST00000428626 DSTQ03001 7570 aaKnown RBP5.89□□□□□ -1.47
SEC13-210ENST00000428626 KRTAP19-7Q3SYF9 63 aa5.87□□□□□ -1.47
SEC13-210ENST00000428626 LCE5AQ5TCM9 118 aa5.85□□□□□ -1.47
SEC13-210ENST00000428626 MT1EP04732 61 aa5.82□□□□□ -1.48
SEC13-210ENST00000428626 GPR98Q8WXG9 6306 aa5.8□□□□□ -1.48
SEC13-210ENST00000428626 CAMK2N1Q7Z7J9 78 aa5.8□□□□□ -1.48
SEC13-210ENST00000428626 KRTAP19-3Q7Z4W3 81 aa5.78□□□□□ -1.48
SEC13-210ENST00000428626 KRTAP4-9Q9BYQ8 210 aa5.77□□□□□ -1.49
SEC13-210ENST00000428626 SERP1Q9Y6X1 66 aa5.73□□□□□ -1.49
SEC13-210ENST00000428626 RPS28P62857 69 aaKnown RBP5.7□□□□□ -1.5
SEC13-210ENST00000428626 COA5Q86WW8 74 aa5.69□□□□□ -1.5
SEC13-210ENST00000428626 A0A0D9SG42 100 aa5.68□□□□□ -1.5
SEC13-210ENST00000428626 KRTAP19-5Q3LI72 72 aa5.66□□□□□ -1.5
SEC13-210ENST00000428626 SPATA8Q6RVD6 105 aa5.64□□□□□ -1.51
SEC13-210ENST00000428626 MT1GP13640 62 aa5.6□□□□□ -1.51
SEC13-210ENST00000428626 LCE1DQ5T752 114 aa5.6□□□□□ -1.51
SEC13-210ENST00000428626 SMIM26A0A096LP01 95 aa5.58□□□□□ -1.52
SEC13-210ENST00000428626 KRTAP12-1P59990 96 aa5.58□□□□□ -1.52
SEC13-210ENST00000428626 SPINT4Q6UDR6 99 aa5.58□□□□□ -1.52
SEC13-210ENST00000428626 MT1MQ8N339 61 aa5.55□□□□□ -1.52
SEC13-210ENST00000428626 A0A1B0GU33 70 aa5.53□□□□□ -1.52
SEC13-210ENST00000428626 V9GYY9 64 aa5.53□□□□□ -1.52
SEC13-210ENST00000428626 SEC61GP60059 68 aa5.52□□□□□ -1.53
SEC13-210ENST00000428626 MT1LQ93083 61 aa5.52□□□□□ -1.53
SEC13-210ENST00000428626 HMCN1Q96RW7 5635 aa5.51□□□□□ -1.53
SEC13-210ENST00000428626 PP632Q6XCG6 107 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms