RNA–Protein interactions for RNA: ENST00000428555.1

TRIM39-208, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-208ENST00000428555 Q5W150 140 aa4.6□□□□□ -1.67
TRIM39-208ENST00000428555 PRO0461Q9UI25 63 aa4.6□□□□□ -1.67
TRIM39-208ENST00000428555 ATP5EP56381 51 aaPredicted RBP4.59□□□□□ -1.67
TRIM39-208ENST00000428555 PRAC1Q96KF2 57 aa4.59□□□□□ -1.67
TRIM39-208ENST00000428555 KRTAP9-3Q9BYQ3 159 aa4.59□□□□□ -1.67
TRIM39-208ENST00000428555 IGKV2D-30A0A075B6S6 120 aa4.57□□□□□ -1.68
TRIM39-208ENST00000428555 IGKV2-30P06310 120 aa4.57□□□□□ -1.68
TRIM39-208ENST00000428555 CASC2Q6XLA1 102 aa4.57□□□□□ -1.68
TRIM39-208ENST00000428555 LINC00846Q9NV44 126 aa4.57□□□□□ -1.68
TRIM39-208ENST00000428555 HCG22E2RYF7 251 aa4.55□□□□□ -1.68
TRIM39-208ENST00000428555 ATOX1O00244 68 aa4.55□□□□□ -1.68
TRIM39-208ENST00000428555 HIST1H4AP62805 103 aaKnown RBP4.55□□□□□ -1.68
TRIM39-208ENST00000428555 H1FX-AS1Q4G0G2 97 aa4.55□□□□□ -1.68
TRIM39-208ENST00000428555 UBL5Q9BZL1 73 aa4.54□□□□□ -1.68
TRIM39-208ENST00000428555 FCGBPQ9Y6R7 5405 aaPredicted RBP4.52□□□□□ -1.69
TRIM39-208ENST00000428555 ETDBQ3ZM63 59 aa4.52□□□□□ -1.69
TRIM39-208ENST00000428555 KRTAP19-1Q8IUB9 90 aa4.48□□□□□ -1.69
TRIM39-208ENST00000428555 A6NN06 94 aa4.47□□□□□ -1.69
TRIM39-208ENST00000428555 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.46□□□□□ -1.7
TRIM39-208ENST00000428555 SERP2Q8N6R1 65 aa4.45□□□□□ -1.7
TRIM39-208ENST00000428555 CAMK2N1Q7Z7J9 78 aa4.44□□□□□ -1.7
TRIM39-208ENST00000428555 KRTAP3-1Q9BYR8 98 aa4.44□□□□□ -1.7
TRIM39-208ENST00000428555 K7ERS5 55 aa4.42□□□□□ -1.7
TRIM39-208ENST00000428555 TP53AIP1Q9HCN2 124 aa4.42□□□□□ -1.7
TRIM39-208ENST00000428555 LUZP6Q538Z0 58 aa4.41□□□□□ -1.7
TRIM39-208ENST00000428555 C1orf64Q8NEQ6 169 aa4.41□□□□□ -1.7
TRIM39-208ENST00000428555 KRTAP9-7A8MTY7 169 aa4.4□□□□□ -1.71
TRIM39-208ENST00000428555 NDUFC1O43677 76 aa4.39□□□□□ -1.71
TRIM39-208ENST00000428555 Q1T7F1 81 aa4.39□□□□□ -1.71
TRIM39-208ENST00000428555 KRTAP19-6Q3LI70 58 aa4.39□□□□□ -1.71
TRIM39-208ENST00000428555 ACYP1P07311 99 aa4.37□□□□□ -1.71
TRIM39-208ENST00000428555 S4R3F8 94 aa4.37□□□□□ -1.71
TRIM39-208ENST00000428555 CSAG1Q6PB30 78 aa4.36□□□□□ -1.71
TRIM39-208ENST00000428555 CYP4F30PQ9H0H9 118 aa4.36□□□□□ -1.71
TRIM39-208ENST00000428555 ADM2Q7Z4H4 148 aa4.33□□□□□ -1.72
TRIM39-208ENST00000428555 LINC00643Q86TS7 51 aa4.32□□□□□ -1.72
TRIM39-208ENST00000428555 CYSTM1Q9H1C7 97 aa4.32□□□□□ -1.72
TRIM39-208ENST00000428555 TRAV22A0A0B4J277 110 aa4.31□□□□□ -1.72
TRIM39-208ENST00000428555 A6NED7 52 aa4.31□□□□□ -1.72
TRIM39-208ENST00000428555 A0A087WVE0 104 aa4.3□□□□□ -1.72
TRIM39-208ENST00000428555 LOC101927531A0A1B0GV80 90 aa4.3□□□□□ -1.72
TRIM39-208ENST00000428555 ATP5EP2Q5VTU8 51 aa4.3□□□□□ -1.72
TRIM39-208ENST00000428555 MACF1Q9UPN3 7388 aaKnown RBP4.3□□□□□ -1.72
TRIM39-208ENST00000428555 SYNE2Q8WXH0 6885 aaKnown RBP4.3□□□□□ -1.72
TRIM39-208ENST00000428555 H7BZZ5 65 aa4.29□□□□□ -1.72
TRIM39-208ENST00000428555 KLKP1Q107X0 134 aa4.28□□□□□ -1.72
TRIM39-208ENST00000428555 H0Y9P7 68 aa4.27□□□□□ -1.73
TRIM39-208ENST00000428555 MT1BP07438 61 aa4.25□□□□□ -1.73
TRIM39-208ENST00000428555 ROMO1P60602 79 aa4.25□□□□□ -1.73
TRIM39-208ENST00000428555 SPRR2GQ9BYE4 73 aa4.25□□□□□ -1.73
TRIM39-208ENST00000428555 KRTAP4-8Q9BYQ9 185 aa4.25□□□□□ -1.73
TRIM39-208ENST00000428555 KRTAP19-8Q3LI54 63 aa4.23□□□□□ -1.73
TRIM39-208ENST00000428555 Q5VV11 94 aa4.22□□□□□ -1.73
TRIM39-208ENST00000428555 LINC00208Q96KT6 92 aa4.22□□□□□ -1.73
TRIM39-208ENST00000428555 CDC42SE1Q9NRR8 79 aa4.22□□□□□ -1.73
TRIM39-208ENST00000428555 TRAV7A0A075B6U4 112 aa4.21□□□□□ -1.74
TRIM39-208ENST00000428555 SPTSSBQ8NFR3 76 aa4.19□□□□□ -1.74
TRIM39-208ENST00000428555 KRTAP4-12Q9BQ66 201 aa4.19□□□□□ -1.74
TRIM39-208ENST00000428555 KRTAP6-3Q3LI67 103 aa4.18□□□□□ -1.74
TRIM39-208ENST00000428555 CRIPTQ9P021 101 aa4.17□□□□□ -1.74
TRIM39-208ENST00000428555 H3BPC8 53 aa4.16□□□□□ -1.74
TRIM39-208ENST00000428555 H0YAA0 97 aa4.14□□□□□ -1.75
TRIM39-208ENST00000428555 KRTAP10-5P60370 271 aa4.14□□□□□ -1.75
TRIM39-208ENST00000428555 C20orf197Q8N268 126 aa4.13□□□□□ -1.75
TRIM39-208ENST00000428555 SPANXA2-OT1Q8N9U9 137 aa4.12□□□□□ -1.75
TRIM39-208ENST00000428555 LCE3BQ5TA77 95 aa4.09□□□□□ -1.75
TRIM39-208ENST00000428555 MIR22HGQ0VDD5 57 aa4.08□□□□□ -1.76
TRIM39-208ENST00000428555 CHKB-CPT1BH3BT56 60 aa4.07□□□□□ -1.76
TRIM39-208ENST00000428555 MUC12Q9UKN1 5478 aa4.05□□□□□ -1.76
TRIM39-208ENST00000428555 DMAC1Q96GE9 116 aa4.05□□□□□ -1.76
TRIM39-208ENST00000428555 P0C880 135 aa4.04□□□□□ -1.76
TRIM39-208ENST00000428555 NEBP20929 6669 aa4.04□□□□□ -1.76
TRIM39-208ENST00000428555 KMT2DO14686 5537 aa4.01□□□□□ -1.77
TRIM39-208ENST00000428555 R4GN34 69 aa4.01□□□□□ -1.77
TRIM39-208ENST00000428555 A0A1B0GU33 70 aa4□□□□□ -1.77
TRIM39-208ENST00000428555 A8MU10 97 aa4□□□□□ -1.77
TRIM39-208ENST00000428555 PLAC4Q8WY50 150 aa4□□□□□ -1.77
TRIM39-208ENST00000428555 M0QZ58 72 aa3.99□□□□□ -1.77
TRIM39-208ENST00000428555 MDN1Q9NU22 5596 aa3.98□□□□□ -1.77
TRIM39-208ENST00000428555 MT1XP80297 61 aa3.98□□□□□ -1.77
TRIM39-208ENST00000428555 ACYP2P14621 99 aa3.97□□□□□ -1.77
TRIM39-208ENST00000428555 KRTAP5-9P26371 169 aa3.97□□□□□ -1.77
TRIM39-208ENST00000428555 PRO2289Q9P1D8 64 aa3.96□□□□□ -1.78
TRIM39-208ENST00000428555 NDUFAF8A1L188 74 aa3.93□□□□□ -1.78
TRIM39-208ENST00000428555 SNURFQ9Y675 71 aa3.93□□□□□ -1.78
TRIM39-208ENST00000428555 LCE4AQ5TA78 99 aa3.9□□□□□ -1.79
TRIM39-208ENST00000428555 PRR15LQ9BU68 103 aa3.9□□□□□ -1.79
TRIM39-208ENST00000428555 KRTAP9-9Q9BYP9 154 aa3.9□□□□□ -1.79
TRIM39-208ENST00000428555 KRTAP9-4Q9BYQ2 154 aa3.9□□□□□ -1.79
TRIM39-208ENST00000428555 KRTAP4-8A0A0G2JLE6 195 aa3.89□□□□□ -1.79
TRIM39-208ENST00000428555 KRTAP25-1Q3LHN0 102 aa3.87□□□□□ -1.79
TRIM39-208ENST00000428555 SPRR2FQ96RM1 72 aa3.87□□□□□ -1.79
TRIM39-208ENST00000428555 KRTAP12-2P59991 146 aa3.86□□□□□ -1.79
TRIM39-208ENST00000428555 KRTAP20-1Q3LI63 56 aa3.86□□□□□ -1.79
TRIM39-208ENST00000428555 LCE1DQ5T752 114 aa3.86□□□□□ -1.79
TRIM39-208ENST00000428555 KRTAP8-1Q8IUC2 63 aa3.85□□□□□ -1.79
TRIM39-208ENST00000428555 SPRR2EP22531 72 aa3.81□□□□□ -1.8
TRIM39-208ENST00000428555 SPRR2BP35325 72 aa3.81□□□□□ -1.8
TRIM39-208ENST00000428555 SPRR2AP35326 72 aa3.81□□□□□ -1.8
TRIM39-208ENST00000428555 KRTAP10-7P60409 375 aaPredicted RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms