RNA–Protein interactions for RNA: ENST00000428425.1

NCBP2-205, Transcript of nuclear cap binding protein subunit 2, humanhuman

TSL 1 (best)

Gene NCBP2, Length 2,220 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2-205ENST00000428425 A0A1B0GU69 56 aa7.22□□□□□ -1.25
NCBP2-205ENST00000428425 LRP2P98164 4655 aa7.21□□□□□ -1.26
NCBP2-205ENST00000428425 LPAP08519 4548 aa7.2□□□□□ -1.26
NCBP2-205ENST00000428425 COX6B2Q6YFQ2 88 aa7.18□□□□□ -1.26
NCBP2-205ENST00000428425 CDC42SE1Q9NRR8 79 aa7.17□□□□□ -1.26
NCBP2-205ENST00000428425 SPTSSBQ8NFR3 76 aa7.14□□□□□ -1.27
NCBP2-205ENST00000428425 HERC1Q15751 4861 aa7.14□□□□□ -1.27
NCBP2-205ENST00000428425 TPRXLQ17RH7 258 aa7.09□□□□□ -1.27
NCBP2-205ENST00000428425 RBM12B-AS1Q9P1G2 102 aa7.05□□□□□ -1.28
NCBP2-205ENST00000428425 KRTAP3-3Q9BYR6 98 aa7.04□□□□□ -1.28
NCBP2-205ENST00000428425 UQCR11O14957 56 aa7.03□□□□□ -1.28
NCBP2-205ENST00000428425 SPATA8Q6RVD6 105 aa7.03□□□□□ -1.28
NCBP2-205ENST00000428425 MIR22HGQ0VDD5 57 aa7.01□□□□□ -1.29
NCBP2-205ENST00000428425 KTN1-AS1Q86SY8 53 aa7.01□□□□□ -1.29
NCBP2-205ENST00000428425 A6NN06 94 aa6.99□□□□□ -1.29
NCBP2-205ENST00000428425 HMCN2Q8NDA2 5059 aa6.99□□□□□ -1.29
NCBP2-205ENST00000428425 S4R3F8 94 aa6.95□□□□□ -1.3
NCBP2-205ENST00000428425 H0YAA0 97 aa6.94□□□□□ -1.3
NCBP2-205ENST00000428425 A0A1B0GU33 70 aa6.91□□□□□ -1.3
NCBP2-205ENST00000428425 H1FX-AS1Q4G0G2 97 aa6.91□□□□□ -1.3
NCBP2-205ENST00000428425 KRTAP10-6P60371 365 aaPredicted RBP6.88□□□□□ -1.31
NCBP2-205ENST00000428425 MUC17Q685J3 4493 aa6.88□□□□□ -1.31
NCBP2-205ENST00000428425 KRTAP3-2Q9BYR7 98 aa6.86□□□□□ -1.31
NCBP2-205ENST00000428425 KRTAP4-1Q9BYQ7 146 aa6.86□□□□□ -1.31
NCBP2-205ENST00000428425 SEC61BP60468 96 aaKnown RBP6.81□□□□□ -1.32
NCBP2-205ENST00000428425 P0C880 135 aa6.8□□□□□ -1.32
NCBP2-205ENST00000428425 KRTAP13-4Q3LI77 160 aa6.79□□□□□ -1.32
NCBP2-205ENST00000428425 H3BS24 57 aa6.78□□□□□ -1.32
NCBP2-205ENST00000428425 MUC2Q02817 5179 aa6.77□□□□□ -1.33
NCBP2-205ENST00000428425 ADM2Q7Z4H4 148 aa6.74□□□□□ -1.33
NCBP2-205ENST00000428425 CSAG1Q6PB30 78 aa6.72□□□□□ -1.33
NCBP2-205ENST00000428425 UBR4Q5T4S7 5183 aa6.7□□□□□ -1.34
NCBP2-205ENST00000428425 PRAC1Q96KF2 57 aa6.7□□□□□ -1.34
NCBP2-205ENST00000428425 KRTAP19-2Q3LHN2 52 aa6.69□□□□□ -1.34
NCBP2-205ENST00000428425 A0A0D9SG42 100 aa6.68□□□□□ -1.34
NCBP2-205ENST00000428425 RNF213Q63HN8 5207 aa6.59□□□□□ -1.35
NCBP2-205ENST00000428425 LINC01554Q52M75 96 aa6.58□□□□□ -1.36
NCBP2-205ENST00000428425 K7ERS5 55 aa6.53□□□□□ -1.36
NCBP2-205ENST00000428425 KRTAP12-2P59991 146 aa6.53□□□□□ -1.36
NCBP2-205ENST00000428425 LORP23490 312 aaPredicted RBP6.52□□□□□ -1.37
NCBP2-205ENST00000428425 FLGP20930 4061 aaPredicted RBP6.51□□□□□ -1.37
NCBP2-205ENST00000428425 KRTAP12-1P59990 96 aa6.48□□□□□ -1.37
NCBP2-205ENST00000428425 M0QZ58 72 aa6.47□□□□□ -1.37
NCBP2-205ENST00000428425 FAT4Q6V0I7 4981 aa6.47□□□□□ -1.37
NCBP2-205ENST00000428425 SPINT4Q6UDR6 99 aa6.44□□□□□ -1.38
NCBP2-205ENST00000428425 CRIPTQ9P021 101 aa6.43□□□□□ -1.38
NCBP2-205ENST00000428425 R4GN34 69 aa6.42□□□□□ -1.38
NCBP2-205ENST00000428425 ROMO1P60602 79 aa6.4□□□□□ -1.38
NCBP2-205ENST00000428425 LCE2CQ5TA81 110 aa6.4□□□□□ -1.38
NCBP2-205ENST00000428425 KRTAP9-6A0A140TA67 174 aa6.36□□□□□ -1.39
NCBP2-205ENST00000428425 KRTAP25-1Q3LHN0 102 aa6.34□□□□□ -1.39
NCBP2-205ENST00000428425 LCE2AQ5TA79 106 aaPredicted RBP6.33□□□□□ -1.4
NCBP2-205ENST00000428425 C10orf95Q9H7T3 257 aa6.25□□□□□ -1.41
NCBP2-205ENST00000428425 MT1HP80294 61 aa6.22□□□□□ -1.41
NCBP2-205ENST00000428425 M0R2T5 61 aa6.16□□□□□ -1.42
NCBP2-205ENST00000428425 LCE2DQ5TA82 110 aaPredicted RBP6.09□□□□□ -1.43
NCBP2-205ENST00000428425 KRTAP9-2Q9BYQ4 174 aa6.08□□□□□ -1.44
NCBP2-205ENST00000428425 MT1FP04733 61 aa6.06□□□□□ -1.44
NCBP2-205ENST00000428425 KRTAP19-1Q8IUB9 90 aa6.06□□□□□ -1.44
NCBP2-205ENST00000428425 MT2AP02795 61 aa6.06□□□□□ -1.44
NCBP2-205ENST00000428425 CAMK2N1Q7Z7J9 78 aa6.06□□□□□ -1.44
NCBP2-205ENST00000428425 KRTAP9-8Q9BYQ0 159 aa6.05□□□□□ -1.44
NCBP2-205ENST00000428425 SPRR2GQ9BYE4 73 aa6.03□□□□□ -1.44
NCBP2-205ENST00000428425 KRTAP10-10P60014 251 aa6□□□□□ -1.45
NCBP2-205ENST00000428425 A0A0A0MQY5 61 aa5.93□□□□□ -1.46
NCBP2-205ENST00000428425 PLAC4Q8WY50 150 aa5.86□□□□□ -1.47
NCBP2-205ENST00000428425 KRTAP19-8Q3LI54 63 aa5.81□□□□□ -1.48
NCBP2-205ENST00000428425 KRTAP9-3Q9BYQ3 159 aa5.8□□□□□ -1.48
NCBP2-205ENST00000428425 MT1BP07438 61 aa5.79□□□□□ -1.48
NCBP2-205ENST00000428425 CRCT1Q9UGL9 99 aa5.78□□□□□ -1.48
NCBP2-205ENST00000428425 TNP1P09430 55 aa5.77□□□□□ -1.49
NCBP2-205ENST00000428425 KRTAP15-1Q3LI76 137 aa5.74□□□□□ -1.49
NCBP2-205ENST00000428425 NDUFAF8A1L188 74 aa5.72□□□□□ -1.49
NCBP2-205ENST00000428425 PP632Q6XCG6 107 aa5.71□□□□□ -1.5
NCBP2-205ENST00000428425 KRTAP10-5P60370 271 aa5.68□□□□□ -1.5
NCBP2-205ENST00000428425 MT1XP80297 61 aa5.68□□□□□ -1.5
NCBP2-205ENST00000428425 LCE2BO14633 110 aa5.64□□□□□ -1.51
NCBP2-205ENST00000428425 USH2AO75445 5202 aa5.62□□□□□ -1.51
NCBP2-205ENST00000428425 KRTAP23-1A1A580 65 aa5.6□□□□□ -1.51
NCBP2-205ENST00000428425 LCE3AQ5TA76 89 aa5.59□□□□□ -1.52
NCBP2-205ENST00000428425 KRTAP10-7P60409 375 aaPredicted RBP5.51□□□□□ -1.53
NCBP2-205ENST00000428425 KRTAP9-7A8MTY7 169 aa5.5□□□□□ -1.53
NCBP2-205ENST00000428425 FSIP2Q5CZC0 6907 aa5.5□□□□□ -1.53
NCBP2-205ENST00000428425 LUZP6Q538Z0 58 aa5.45□□□□□ -1.54
NCBP2-205ENST00000428425 KRTAP10-12P60413 245 aa5.44□□□□□ -1.54
NCBP2-205ENST00000428425 SSPOA2VEC9 5147 aa5.42□□□□□ -1.54
NCBP2-205ENST00000428425 PRO2289Q9P1D8 64 aa5.42□□□□□ -1.54
NCBP2-205ENST00000428425 KRTAP8-1Q8IUC2 63 aa5.41□□□□□ -1.54
NCBP2-205ENST00000428425 KRTAP19-6Q3LI70 58 aa5.39□□□□□ -1.55
NCBP2-205ENST00000428425 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.37□□□□□ -1.55
NCBP2-205ENST00000428425 KMT2DO14686 5537 aa5.36□□□□□ -1.55
NCBP2-205ENST00000428425 FCGBPQ9Y6R7 5405 aaPredicted RBP5.32□□□□□ -1.56
NCBP2-205ENST00000428425 KRTAP12-3P60328 96 aa5.31□□□□□ -1.56
NCBP2-205ENST00000428425 SPRR5A0A1B0GTR4 108 aa5.29□□□□□ -1.56
NCBP2-205ENST00000428425 KRTAP4-8A0A0G2JLE6 195 aa5.25□□□□□ -1.57
NCBP2-205ENST00000428425 KRTAP4-8Q9BYQ9 185 aa5.25□□□□□ -1.57
NCBP2-205ENST00000428425 KRTAP19-5Q3LI72 72 aa5.21□□□□□ -1.57
NCBP2-205ENST00000428425 LOC100996750A0A140TA64 210 aa5.12□□□□□ -1.59
NCBP2-205ENST00000428425 KRTAP4-6Q9BYQ5 205 aa5.12□□□□□ -1.59
NCBP2-205ENST00000428425 KRTAP6-3Q3LI67 103 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms