RNA–Protein interactions for RNA: ENST00000428286.5

PRUNE2-207, Transcript of prune homolog 2, humanhuman

TSL 5 BASIC

Gene PRUNE2, Length 12,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2-207ENST00000428286 PRKDCP78527 4128 aaKnown RBP2.53□□□□□ -2
PRUNE2-207ENST00000428286 SPENQ96T58 3664 aaKnown RBP2.53□□□□□ -2
PRUNE2-207ENST00000428286 ASPMQ8IZT6 3477 aa2.51□□□□□ -2.01
PRUNE2-207ENST00000428286 KMT2AQ03164 3969 aa2.51□□□□□ -2.01
PRUNE2-207ENST00000428286 DNAH17Q9UFH2 4485 aa2.51□□□□□ -2.01
PRUNE2-207ENST00000428286 LOC400499M0QZD8 3231 aa2.5□□□□□ -2.01
PRUNE2-207ENST00000428286 KRTAP15-1Q3LI76 137 aa2.5□□□□□ -2.01
PRUNE2-207ENST00000428286 HYDINQ4G0P3 5121 aa2.49□□□□□ -2.01
PRUNE2-207ENST00000428286 LRP1Q07954 4544 aaKnown RBP2.49□□□□□ -2.01
PRUNE2-207ENST00000428286 NBPF19A0A087WUL8 3843 aa2.48□□□□□ -2.01
PRUNE2-207ENST00000428286 KRTAP3-2Q9BYR7 98 aa2.47□□□□□ -2.01
PRUNE2-207ENST00000428286 DNAH8Q96JB1 4490 aa2.47□□□□□ -2.01
PRUNE2-207ENST00000428286 RYR3Q15413 4870 aa2.47□□□□□ -2.01
PRUNE2-207ENST00000428286 BIRC6Q9NR09 4857 aa2.46□□□□□ -2.02
PRUNE2-207ENST00000428286 FLGP20930 4061 aaPredicted RBP2.46□□□□□ -2.02
PRUNE2-207ENST00000428286 SVEP1Q4LDE5 3571 aa2.46□□□□□ -2.02
PRUNE2-207ENST00000428286 FAT2Q9NYQ8 4349 aa2.46□□□□□ -2.02
PRUNE2-207ENST00000428286 KMT2CQ8NEZ4 4911 aaKnown RBP2.45□□□□□ -2.02
PRUNE2-207ENST00000428286 PKHD1P08F94 4074 aa2.45□□□□□ -2.02
PRUNE2-207ENST00000428286 PCLOQ9Y6V0 5065 aa2.44□□□□□ -2.02
PRUNE2-207ENST00000428286 VPS13CQ709C8 3753 aa2.44□□□□□ -2.02
PRUNE2-207ENST00000428286 ANK3Q12955 4377 aaKnown RBP2.44□□□□□ -2.02
PRUNE2-207ENST00000428286 LYSTQ99698 3801 aa2.44□□□□□ -2.02
PRUNE2-207ENST00000428286 SACSQ9NZJ4 4579 aa2.43□□□□□ -2.02
PRUNE2-207ENST00000428286 UBR4Q5T4S7 5183 aa2.43□□□□□ -2.02
PRUNE2-207ENST00000428286 VPS13DQ5THJ4 4388 aa2.43□□□□□ -2.02
PRUNE2-207ENST00000428286 DNAH5Q8TE73 4624 aa2.42□□□□□ -2.02
PRUNE2-207ENST00000428286 RELNP78509 3460 aa2.42□□□□□ -2.02
PRUNE2-207ENST00000428286 LRP1BQ9NZR2 4599 aa2.4□□□□□ -2.02
PRUNE2-207ENST00000428286 ABCA13Q86UQ4 5058 aa2.4□□□□□ -2.02
PRUNE2-207ENST00000428286 APOBP04114 4563 aaKnown RBP2.4□□□□□ -2.03
PRUNE2-207ENST00000428286 DNAH9Q9NYC9 4486 aa2.4□□□□□ -2.03
PRUNE2-207ENST00000428286 KRTAP3-3Q9BYR6 98 aa2.4□□□□□ -2.03
PRUNE2-207ENST00000428286 KRTAP19-4Q3LI73 84 aa2.39□□□□□ -2.03
PRUNE2-207ENST00000428286 CUBNO60494 3623 aa2.38□□□□□ -2.03
PRUNE2-207ENST00000428286 KRTAP10-12P60413 245 aa2.37□□□□□ -2.03
PRUNE2-207ENST00000428286 HERC2O95714 4834 aa2.37□□□□□ -2.03
PRUNE2-207ENST00000428286 MT1HL1P0DM35 61 aa2.36□□□□□ -2.03
PRUNE2-207ENST00000428286 KRTAP10-4P60372 401 aaPredicted RBP2.36□□□□□ -2.03
PRUNE2-207ENST00000428286 CSMD3Q7Z407 3707 aa2.34□□□□□ -2.03
PRUNE2-207ENST00000428286 LRP2P98164 4655 aa2.33□□□□□ -2.04
PRUNE2-207ENST00000428286 KRTAP12-3P60328 96 aa2.32□□□□□ -2.04
PRUNE2-207ENST00000428286 RNF213Q63HN8 5207 aa2.32□□□□□ -2.04
PRUNE2-207ENST00000428286 PKD1P98161 4303 aa2.31□□□□□ -2.04
PRUNE2-207ENST00000428286 PKHD1L1Q86WI1 4243 aa2.31□□□□□ -2.04
PRUNE2-207ENST00000428286 FAT3Q8TDW7 4589 aa2.3□□□□□ -2.04
PRUNE2-207ENST00000428286 HMCN2Q8NDA2 5059 aa2.3□□□□□ -2.04
PRUNE2-207ENST00000428286 MUC3AQ02505 3323 aa2.3□□□□□ -2.04
PRUNE2-207ENST00000428286 MT3P25713 68 aa2.3□□□□□ -2.04
PRUNE2-207ENST00000428286 HERC1Q15751 4861 aa2.29□□□□□ -2.04
PRUNE2-207ENST00000428286 HSPG2P98160 4391 aa2.28□□□□□ -2.04
PRUNE2-207ENST00000428286 STARD9Q9P2P6 4700 aa2.27□□□□□ -2.05
PRUNE2-207ENST00000428286 FAT1Q14517 4588 aa2.25□□□□□ -2.05
PRUNE2-207ENST00000428286 EPPK1P58107 5090 aaKnown RBP2.24□□□□□ -2.05
PRUNE2-207ENST00000428286 CRCT1Q9UGL9 99 aa2.23□□□□□ -2.05
PRUNE2-207ENST00000428286 MUC12Q9UKN1 5478 aa2.22□□□□□ -2.05
PRUNE2-207ENST00000428286 CSMD2Q7Z408 3487 aa2.21□□□□□ -2.06
PRUNE2-207ENST00000428286 TNXBP22105 4242 aa2.2□□□□□ -2.06
PRUNE2-207ENST00000428286 KIAA1109Q2LD37 5005 aa2.18□□□□□ -2.06
PRUNE2-207ENST00000428286 LCE3AQ5TA76 89 aa2.17□□□□□ -2.06
PRUNE2-207ENST00000428286 SPRR2GQ9BYE4 73 aa2.16□□□□□ -2.06
PRUNE2-207ENST00000428286 KRTAP8-1Q8IUC2 63 aa2.15□□□□□ -2.06
PRUNE2-207ENST00000428286 LORP23490 312 aaPredicted RBP2.13□□□□□ -2.07
PRUNE2-207ENST00000428286 SPRR5A0A1B0GTR4 108 aa2.06□□□□□ -2.08
PRUNE2-207ENST00000428286 KRTAP19-8Q3LI54 63 aa2.05□□□□□ -2.08
PRUNE2-207ENST00000428286 MT2AP02795 61 aa2.04□□□□□ -2.08
PRUNE2-207ENST00000428286 MUC17Q685J3 4493 aa2.03□□□□□ -2.08
PRUNE2-207ENST00000428286 LCE3CQ5T5A8 94 aa2.03□□□□□ -2.08
PRUNE2-207ENST00000428286 KRTAP10-5P60370 271 aa2.03□□□□□ -2.08
PRUNE2-207ENST00000428286 KRTAP4-5Q9BYR2 181 aa2.01□□□□□ -2.09
PRUNE2-207ENST00000428286 FAT4Q6V0I7 4981 aa2.01□□□□□ -2.09
PRUNE2-207ENST00000428286 KRTAP17-1Q9BYP8 105 aa2□□□□□ -2.09
PRUNE2-207ENST00000428286 MT1HP80294 61 aa2□□□□□ -2.09
PRUNE2-207ENST00000428286 KRTAP19-5Q3LI72 72 aa1.98□□□□□ -2.09
PRUNE2-207ENST00000428286 KRTAP4-1Q9BYQ7 146 aa1.98□□□□□ -2.09
PRUNE2-207ENST00000428286 MT1FP04733 61 aa1.97□□□□□ -2.09
PRUNE2-207ENST00000428286 USH2AO75445 5202 aa1.95□□□□□ -2.1
PRUNE2-207ENST00000428286 KRTAP10-7P60409 375 aaPredicted RBP1.93□□□□□ -2.1
PRUNE2-207ENST00000428286 GPR98Q8WXG9 6306 aa1.93□□□□□ -2.1
PRUNE2-207ENST00000428286 MDN1Q9NU22 5596 aa1.91□□□□□ -2.1
PRUNE2-207ENST00000428286 KRTAP19-1Q8IUB9 90 aa1.91□□□□□ -2.1
PRUNE2-207ENST00000428286 MT1XP80297 61 aa1.9□□□□□ -2.1
PRUNE2-207ENST00000428286 MT1GP13640 62 aa1.86□□□□□ -2.11
PRUNE2-207ENST00000428286 SPRR2FQ96RM1 72 aa1.84□□□□□ -2.11
PRUNE2-207ENST00000428286 MT1BP07438 61 aa1.83□□□□□ -2.12
PRUNE2-207ENST00000428286 KRTAP12-4P60329 112 aa1.81□□□□□ -2.12
PRUNE2-207ENST00000428286 LPAP08519 4548 aa1.81□□□□□ -2.12
PRUNE2-207ENST00000428286 MT1LQ93083 61 aa1.8□□□□□ -2.12
PRUNE2-207ENST00000428286 LCE3EQ5T5B0 92 aa1.79□□□□□ -2.12
PRUNE2-207ENST00000428286 KRTAP9-3Q9BYQ3 159 aa1.79□□□□□ -2.12
PRUNE2-207ENST00000428286 FCGBPQ9Y6R7 5405 aaPredicted RBP1.79□□□□□ -2.12
PRUNE2-207ENST00000428286 LCE3BQ5TA77 95 aa1.77□□□□□ -2.13
PRUNE2-207ENST00000428286 KMT2DO14686 5537 aa1.77□□□□□ -2.13
PRUNE2-207ENST00000428286 KRTAP9-8Q9BYQ0 159 aa1.76□□□□□ -2.13
PRUNE2-207ENST00000428286 KRTAP19-3Q7Z4W3 81 aa1.76□□□□□ -2.13
PRUNE2-207ENST00000428286 LCE3DQ9BYE3 92 aa1.76□□□□□ -2.13
PRUNE2-207ENST00000428286 MT1EP04732 61 aa1.74□□□□□ -2.13
PRUNE2-207ENST00000428286 LCE2CQ5TA81 110 aa1.73□□□□□ -2.13
PRUNE2-207ENST00000428286 NEBP20929 6669 aa1.72□□□□□ -2.13
PRUNE2-207ENST00000428286 SYNE2Q8WXH0 6885 aaKnown RBP1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms