RNA–Protein interactions for RNA: ENST00000427505.5

ZNF440-203, Transcript of zinc finger protein 440, humanhuman

TSL 3

Gene ZNF440, Length 920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-203ENST00000427505 PRR15LQ9BU68 103 aa2.93□□□□□ -1.94
ZNF440-203ENST00000427505 KRTAP12-2P59991 146 aa2.92□□□□□ -1.94
ZNF440-203ENST00000427505 DNAH6Q9C0G6 4158 aa2.91□□□□□ -1.94
ZNF440-203ENST00000427505 ALMS1Q8TCU4 4167 aa2.91□□□□□ -1.94
ZNF440-203ENST00000427505 CHKB-CPT1BH3BT56 60 aa2.91□□□□□ -1.94
ZNF440-203ENST00000427505 LINC00304Q8N9R0 145 aa2.91□□□□□ -1.94
ZNF440-203ENST00000427505 ATP11AUNQ6ZP68 121 aa2.9□□□□□ -1.95
ZNF440-203ENST00000427505 CDC42SE1Q9NRR8 79 aa2.9□□□□□ -1.95
ZNF440-203ENST00000427505 DNAH17Q9UFH2 4485 aa2.89□□□□□ -1.95
ZNF440-203ENST00000427505 KRTAP10-4P60372 401 aaPredicted RBP2.89□□□□□ -1.95
ZNF440-203ENST00000427505 A6NED7 52 aa2.88□□□□□ -1.95
ZNF440-203ENST00000427505 C7orf65Q6ZTY9 151 aa2.88□□□□□ -1.95
ZNF440-203ENST00000427505 C20orf166-AS1Q96NR2 134 aa2.88□□□□□ -1.95
ZNF440-203ENST00000427505 KMT2AQ03164 3969 aa2.87□□□□□ -1.95
ZNF440-203ENST00000427505 A8MUU9 505 aa2.87□□□□□ -1.95
ZNF440-203ENST00000427505 LCA10Q71F78 164 aa2.87□□□□□ -1.95
ZNF440-203ENST00000427505 DNAH2Q9P225 4427 aa2.86□□□□□ -1.95
ZNF440-203ENST00000427505 PMAIP1Q13794 54 aa2.85□□□□□ -1.95
ZNF440-203ENST00000427505 KRTAP5-2Q701N4 177 aa2.85□□□□□ -1.95
ZNF440-203ENST00000427505 LCE3AQ5TA76 89 aa2.84□□□□□ -1.95
ZNF440-203ENST00000427505 A0A1B0GU69 56 aa2.83□□□□□ -1.96
ZNF440-203ENST00000427505 A6NN06 94 aa2.83□□□□□ -1.96
ZNF440-203ENST00000427505 SPINK7P58062 85 aa2.83□□□□□ -1.96
ZNF440-203ENST00000427505 SEC61GP60059 68 aa2.83□□□□□ -1.96
ZNF440-203ENST00000427505 SPTSSBQ8NFR3 76 aa2.83□□□□□ -1.96
ZNF440-203ENST00000427505 DNAH8Q96JB1 4490 aa2.83□□□□□ -1.96
ZNF440-203ENST00000427505 RETNLBQ9BQ08 111 aa2.82□□□□□ -1.96
ZNF440-203ENST00000427505 PKD1P98161 4303 aa2.82□□□□□ -1.96
ZNF440-203ENST00000427505 SPATA8Q6RVD6 105 aa2.81□□□□□ -1.96
ZNF440-203ENST00000427505 KTN1-AS1Q86SY8 53 aa2.81□□□□□ -1.96
ZNF440-203ENST00000427505 FRAS1Q86XX4 4008 aa2.81□□□□□ -1.96
ZNF440-203ENST00000427505 DNHD1Q96M86 4753 aa2.8□□□□□ -1.96
ZNF440-203ENST00000427505 DNAH11Q96DT5 4516 aa2.8□□□□□ -1.96
ZNF440-203ENST00000427505 UQCR11O14957 56 aa2.8□□□□□ -1.96
ZNF440-203ENST00000427505 SMR3BP02814 79 aaPredicted RBP2.8□□□□□ -1.96
ZNF440-203ENST00000427505 DNAH5Q8TE73 4624 aa2.79□□□□□ -1.96
ZNF440-203ENST00000427505 FAT2Q9NYQ8 4349 aa2.79□□□□□ -1.96
ZNF440-203ENST00000427505 KRTAP10-8P60410 259 aa2.78□□□□□ -1.96
ZNF440-203ENST00000427505 LRP1BQ9NZR2 4599 aa2.78□□□□□ -1.97
ZNF440-203ENST00000427505 MIR22HGQ0VDD5 57 aa2.76□□□□□ -1.97
ZNF440-203ENST00000427505 COX6B2Q6YFQ2 88 aa2.76□□□□□ -1.97
ZNF440-203ENST00000427505 C9orf92A6NGG3 77 aa2.75□□□□□ -1.97
ZNF440-203ENST00000427505 RPL37P61927 97 aaKnown RBP2.73□□□□□ -1.97
ZNF440-203ENST00000427505 Q5VSD8 79 aa2.73□□□□□ -1.97
ZNF440-203ENST00000427505 VPS13BQ7Z7G8 4022 aa2.72□□□□□ -1.97
ZNF440-203ENST00000427505 FLG2Q5D862 2391 aaPredicted RBP2.72□□□□□ -1.97
ZNF440-203ENST00000427505 SACSQ9NZJ4 4579 aa2.71□□□□□ -1.97
ZNF440-203ENST00000427505 A0A1B0GU33 70 aa2.69□□□□□ -1.98
ZNF440-203ENST00000427505 H1FX-AS1Q4G0G2 97 aa2.69□□□□□ -1.98
ZNF440-203ENST00000427505 RBM12B-AS1Q9P1G2 102 aa2.69□□□□□ -1.98
ZNF440-203ENST00000427505 PKHD1L1Q86WI1 4243 aa2.68□□□□□ -1.98
ZNF440-203ENST00000427505 DYNC1H1Q14204 4646 aaKnown RBP2.68□□□□□ -1.98
ZNF440-203ENST00000427505 H0YAA0 97 aa2.68□□□□□ -1.98
ZNF440-203ENST00000427505 MT1HL1P0DM35 61 aa2.68□□□□□ -1.98
ZNF440-203ENST00000427505 TPRXLQ17RH7 258 aa2.67□□□□□ -1.98
ZNF440-203ENST00000427505 PKHD1P08F94 4074 aa2.67□□□□□ -1.98
ZNF440-203ENST00000427505 KRTAP5-5Q701N2 237 aaPredicted RBP2.66□□□□□ -1.98
ZNF440-203ENST00000427505 HYDINQ4G0P3 5121 aa2.66□□□□□ -1.98
ZNF440-203ENST00000427505 APOBP04114 4563 aaKnown RBP2.66□□□□□ -1.98
ZNF440-203ENST00000427505 K7ERS5 55 aa2.63□□□□□ -1.99
ZNF440-203ENST00000427505 S4R3F8 94 aa2.63□□□□□ -1.99
ZNF440-203ENST00000427505 RYR2Q92736 4967 aa2.61□□□□□ -1.99
ZNF440-203ENST00000427505 ADM2Q7Z4H4 148 aa2.59□□□□□ -1.99
ZNF440-203ENST00000427505 LINC01554Q52M75 96 aa2.58□□□□□ -2
ZNF440-203ENST00000427505 FAT1Q14517 4588 aa2.57□□□□□ -2
ZNF440-203ENST00000427505 KRTAP25-1Q3LHN0 102 aa2.56□□□□□ -2
ZNF440-203ENST00000427505 CSAG1Q6PB30 78 aa2.56□□□□□ -2
ZNF440-203ENST00000427505 M0QZ58 72 aa2.55□□□□□ -2
ZNF440-203ENST00000427505 TNXBP22105 4242 aa2.55□□□□□ -2
ZNF440-203ENST00000427505 KRTAP13-4Q3LI77 160 aa2.55□□□□□ -2
ZNF440-203ENST00000427505 DMBT1Q9UGM3 2413 aaPredicted RBP2.55□□□□□ -2
ZNF440-203ENST00000427505 P0C880 135 aa2.54□□□□□ -2
ZNF440-203ENST00000427505 ROMO1P60602 79 aa2.54□□□□□ -2
ZNF440-203ENST00000427505 KMT2CQ8NEZ4 4911 aaKnown RBP2.54□□□□□ -2
ZNF440-203ENST00000427505 FAT3Q8TDW7 4589 aa2.53□□□□□ -2
ZNF440-203ENST00000427505 HSPG2P98160 4391 aa2.52□□□□□ -2.01
ZNF440-203ENST00000427505 RYR1P21817 5038 aa2.51□□□□□ -2.01
ZNF440-203ENST00000427505 LRP1Q07954 4544 aaKnown RBP2.51□□□□□ -2.01
ZNF440-203ENST00000427505 KRTAP12-1P59990 96 aa2.49□□□□□ -2.01
ZNF440-203ENST00000427505 A0A0D9SG42 100 aa2.48□□□□□ -2.01
ZNF440-203ENST00000427505 CAMK2N1Q7Z7J9 78 aa2.48□□□□□ -2.01
ZNF440-203ENST00000427505 LCE1CQ5T751 118 aa2.47□□□□□ -2.01
ZNF440-203ENST00000427505 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
ZNF440-203ENST00000427505 KRTAP19-2Q3LHN2 52 aa2.46□□□□□ -2.02
ZNF440-203ENST00000427505 MYCBP2O75592 4640 aa2.44□□□□□ -2.02
ZNF440-203ENST00000427505 KIAA1109Q2LD37 5005 aa2.44□□□□□ -2.02
ZNF440-203ENST00000427505 LCE3DQ9BYE3 92 aa2.43□□□□□ -2.02
ZNF440-203ENST00000427505 KRTAP4-1Q9BYQ7 146 aa2.43□□□□□ -2.02
ZNF440-203ENST00000427505 R4GN34 69 aa2.43□□□□□ -2.02
ZNF440-203ENST00000427505 RYR3Q15413 4870 aa2.43□□□□□ -2.02
ZNF440-203ENST00000427505 CRIPTQ9P021 101 aa2.42□□□□□ -2.02
ZNF440-203ENST00000427505 SPINT4Q6UDR6 99 aa2.41□□□□□ -2.02
ZNF440-203ENST00000427505 C10orf95Q9H7T3 257 aa2.35□□□□□ -2.03
ZNF440-203ENST00000427505 LRP2P98164 4655 aa2.35□□□□□ -2.03
ZNF440-203ENST00000427505 PP632Q6XCG6 107 aa2.34□□□□□ -2.03
ZNF440-203ENST00000427505 EPPK1P58107 5090 aaKnown RBP2.33□□□□□ -2.04
ZNF440-203ENST00000427505 KRTAP5-8O75690 187 aa2.32□□□□□ -2.04
ZNF440-203ENST00000427505 MUC17Q685J3 4493 aa2.3□□□□□ -2.04
ZNF440-203ENST00000427505 SPRR2GQ9BYE4 73 aa2.29□□□□□ -2.04
ZNF440-203ENST00000427505 LPAP08519 4548 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms