RNA–Protein interactions for RNA: ENST00000427449.1

HLA-DQB2-230, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

Gene HLA-DQB2, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-230ENST00000427449 ACYP1P07311 99 aa7.04□□□□□ -1.28
HLA-DQB2-230ENST00000427449 ATP5EP2Q5VTU8 51 aa7.03□□□□□ -1.28
HLA-DQB2-230ENST00000427449 A6NN06 94 aa6.99□□□□□ -1.29
HLA-DQB2-230ENST00000427449 UQCRQO14949 82 aa6.97□□□□□ -1.29
HLA-DQB2-230ENST00000427449 H0Y9P7 68 aa6.96□□□□□ -1.3
HLA-DQB2-230ENST00000427449 H0YAA0 97 aa6.94□□□□□ -1.3
HLA-DQB2-230ENST00000427449 HIST1H4AP62805 103 aaKnown RBP6.94□□□□□ -1.3
HLA-DQB2-230ENST00000427449 OCR1Q9BZK8 76 aa6.92□□□□□ -1.3
HLA-DQB2-230ENST00000427449 MUC12Q9UKN1 5478 aa6.9□□□□□ -1.3
HLA-DQB2-230ENST00000427449 NEBP20929 6669 aa6.9□□□□□ -1.3
HLA-DQB2-230ENST00000427449 ATOX1O00244 68 aa6.9□□□□□ -1.3
HLA-DQB2-230ENST00000427449 LINC00643Q86TS7 51 aa6.9□□□□□ -1.3
HLA-DQB2-230ENST00000427449 CRIPTQ9P021 101 aa6.9□□□□□ -1.3
HLA-DQB2-230ENST00000427449 KRTAP5-9P26371 169 aa6.88□□□□□ -1.31
HLA-DQB2-230ENST00000427449 IMUPQ9GZP8 106 aa6.85□□□□□ -1.31
HLA-DQB2-230ENST00000427449 A8MUN3 132 aa6.83□□□□□ -1.32
HLA-DQB2-230ENST00000427449 LINC00208Q96KT6 92 aa6.83□□□□□ -1.32
HLA-DQB2-230ENST00000427449 NDUFC1O43677 76 aa6.81□□□□□ -1.32
HLA-DQB2-230ENST00000427449 K7ERU9 68 aa6.79□□□□□ -1.32
HLA-DQB2-230ENST00000427449 MT1XP80297 61 aa6.79□□□□□ -1.32
HLA-DQB2-230ENST00000427449 KMT2DO14686 5537 aa6.78□□□□□ -1.32
HLA-DQB2-230ENST00000427449 ADM2Q7Z4H4 148 aa6.78□□□□□ -1.32
HLA-DQB2-230ENST00000427449 J3QR89 54 aa6.73□□□□□ -1.33
HLA-DQB2-230ENST00000427449 P0C880 135 aa6.73□□□□□ -1.33
HLA-DQB2-230ENST00000427449 KRTAP3-2Q9BYR7 98 aa6.73□□□□□ -1.33
HLA-DQB2-230ENST00000427449 MDN1Q9NU22 5596 aa6.72□□□□□ -1.33
HLA-DQB2-230ENST00000427449 DMAC1Q96GE9 116 aa6.72□□□□□ -1.33
HLA-DQB2-230ENST00000427449 MP68P56378 58 aa6.69□□□□□ -1.34
HLA-DQB2-230ENST00000427449 H3BPC8 53 aa6.66□□□□□ -1.34
HLA-DQB2-230ENST00000427449 KRTAP12-2P59991 146 aa6.59□□□□□ -1.35
HLA-DQB2-230ENST00000427449 KRTAP20-1Q3LI63 56 aa6.58□□□□□ -1.36
HLA-DQB2-230ENST00000427449 PCP4P48539 62 aa6.55□□□□□ -1.36
HLA-DQB2-230ENST00000427449 R4GN34 69 aa6.55□□□□□ -1.36
HLA-DQB2-230ENST00000427449 SCGB1A1P11684 91 aa6.54□□□□□ -1.36
HLA-DQB2-230ENST00000427449 PRO2289Q9P1D8 64 aa6.54□□□□□ -1.36
HLA-DQB2-230ENST00000427449 M0QZ58 72 aa6.53□□□□□ -1.36
HLA-DQB2-230ENST00000427449 MT-ATP8P03928 68 aa6.53□□□□□ -1.36
HLA-DQB2-230ENST00000427449 SPRR2FQ96RM1 72 aa6.52□□□□□ -1.37
HLA-DQB2-230ENST00000427449 KRTAP4-8A0A0G2JLE6 195 aa6.5□□□□□ -1.37
HLA-DQB2-230ENST00000427449 KRTAP4-8Q9BYQ9 185 aa6.5□□□□□ -1.37
HLA-DQB2-230ENST00000427449 TRAV7A0A075B6U4 112 aa6.49□□□□□ -1.37
HLA-DQB2-230ENST00000427449 C20orf197Q8N268 126 aa6.49□□□□□ -1.37
HLA-DQB2-230ENST00000427449 PLAC4Q8WY50 150 aa6.49□□□□□ -1.37
HLA-DQB2-230ENST00000427449 KRTAP10-7P60409 375 aaPredicted RBP6.46□□□□□ -1.38
HLA-DQB2-230ENST00000427449 LCE1AQ5T7P2 110 aa6.46□□□□□ -1.38
HLA-DQB2-230ENST00000427449 KRTAP8-1Q8IUC2 63 aa6.45□□□□□ -1.38
HLA-DQB2-230ENST00000427449 SPRR2EP22531 72 aa6.43□□□□□ -1.38
HLA-DQB2-230ENST00000427449 SPRR2BP35325 72 aa6.43□□□□□ -1.38
HLA-DQB2-230ENST00000427449 SPRR2AP35326 72 aa6.43□□□□□ -1.38
HLA-DQB2-230ENST00000427449 KRTAP10-12P60413 245 aa6.43□□□□□ -1.38
HLA-DQB2-230ENST00000427449 KRTAP2-3P0C7H8 128 aa6.39□□□□□ -1.39
HLA-DQB2-230ENST00000427449 LINC01554Q52M75 96 aa6.39□□□□□ -1.39
HLA-DQB2-230ENST00000427449 KRTAP2-4Q9BYR9 128 aa6.39□□□□□ -1.39
HLA-DQB2-230ENST00000427449 ACYP2P14621 99 aa6.38□□□□□ -1.39
HLA-DQB2-230ENST00000427449 SMIM20Q8N5G0 67 aa6.35□□□□□ -1.39
HLA-DQB2-230ENST00000427449 KRTAP13-4Q3LI77 160 aa6.33□□□□□ -1.4
HLA-DQB2-230ENST00000427449 SNURFQ9Y675 71 aa6.33□□□□□ -1.4
HLA-DQB2-230ENST00000427449 SPANXA2-OT1Q8N9U9 137 aa6.27□□□□□ -1.41
HLA-DQB2-230ENST00000427449 ANAPC13Q9BS18 74 aa6.26□□□□□ -1.41
HLA-DQB2-230ENST00000427449 SPTSSBQ8NFR3 76 aa6.23□□□□□ -1.41
HLA-DQB2-230ENST00000427449 SPRR2DP22532 72 aa6.21□□□□□ -1.42
HLA-DQB2-230ENST00000427449 CHKB-CPT1BH3BT56 60 aa6.19□□□□□ -1.42
HLA-DQB2-230ENST00000427449 SERP2Q8N6R1 65 aa6.19□□□□□ -1.42
HLA-DQB2-230ENST00000427449 KRTAP2-2Q9BYT5 123 aa6.19□□□□□ -1.42
HLA-DQB2-230ENST00000427449 KRTAP2-1Q9BYU5 128 aa6.19□□□□□ -1.42
HLA-DQB2-230ENST00000427449 KRTAP19-7Q3SYF9 63 aa6.1□□□□□ -1.43
HLA-DQB2-230ENST00000427449 CYSTM1Q9H1C7 97 aa6.1□□□□□ -1.43
HLA-DQB2-230ENST00000427449 COA5Q86WW8 74 aa6.09□□□□□ -1.43
HLA-DQB2-230ENST00000427449 CCDC179H3BU77 68 aa6.07□□□□□ -1.44
HLA-DQB2-230ENST00000427449 COX7CP15954 63 aa6.07□□□□□ -1.44
HLA-DQB2-230ENST00000427449 LCE3BQ5TA77 95 aa6.07□□□□□ -1.44
HLA-DQB2-230ENST00000427449 H7BZZ5 65 aa6□□□□□ -1.45
HLA-DQB2-230ENST00000427449 MT1EP04732 61 aa6□□□□□ -1.45
HLA-DQB2-230ENST00000427449 LCE5AQ5TCM9 118 aa6□□□□□ -1.45
HLA-DQB2-230ENST00000427449 SPATA8Q6RVD6 105 aa5.96□□□□□ -1.46
HLA-DQB2-230ENST00000427449 CAMK2N1Q7Z7J9 78 aa5.95□□□□□ -1.46
HLA-DQB2-230ENST00000427449 KRTAP12-1P59990 96 aa5.94□□□□□ -1.46
HLA-DQB2-230ENST00000427449 TMEM258P61165 79 aa5.92□□□□□ -1.46
HLA-DQB2-230ENST00000427449 A0A0D9SG42 100 aa5.91□□□□□ -1.46
HLA-DQB2-230ENST00000427449 KRTAP19-3Q7Z4W3 81 aa5.91□□□□□ -1.46
HLA-DQB2-230ENST00000427449 A0A1B0GU33 70 aa5.85□□□□□ -1.47
HLA-DQB2-230ENST00000427449 RPS28P62857 69 aaKnown RBP5.85□□□□□ -1.47
HLA-DQB2-230ENST00000427449 DSTQ03001 7570 aaKnown RBP5.85□□□□□ -1.47
HLA-DQB2-230ENST00000427449 KRTAP19-5Q3LI72 72 aa5.83□□□□□ -1.48
HLA-DQB2-230ENST00000427449 ATP5EP56381 51 aaPredicted RBP5.81□□□□□ -1.48
HLA-DQB2-230ENST00000427449 SERP1Q9Y6X1 66 aa5.81□□□□□ -1.48
HLA-DQB2-230ENST00000427449 SEC61GP60059 68 aa5.79□□□□□ -1.48
HLA-DQB2-230ENST00000427449 SPINT4Q6UDR6 99 aa5.78□□□□□ -1.48
HLA-DQB2-230ENST00000427449 A8MU10 97 aa5.75□□□□□ -1.49
HLA-DQB2-230ENST00000427449 MT1GP13640 62 aa5.72□□□□□ -1.49
HLA-DQB2-230ENST00000427449 MT1LQ93083 61 aa5.72□□□□□ -1.49
HLA-DQB2-230ENST00000427449 MT1MQ8N339 61 aa5.71□□□□□ -1.5
HLA-DQB2-230ENST00000427449 C10orf95Q9H7T3 257 aa5.7□□□□□ -1.5
HLA-DQB2-230ENST00000427449 KRTAP4-9Q9BYQ8 210 aa5.69□□□□□ -1.5
HLA-DQB2-230ENST00000427449 A0A1B0GU69 56 aa5.67□□□□□ -1.5
HLA-DQB2-230ENST00000427449 LCE3AQ5TA76 89 aa5.67□□□□□ -1.5
HLA-DQB2-230ENST00000427449 SMIM26A0A096LP01 95 aa5.63□□□□□ -1.51
HLA-DQB2-230ENST00000427449 KRTAP4-3Q9BYR4 195 aa5.61□□□□□ -1.51
HLA-DQB2-230ENST00000427449 LCE1DQ5T752 114 aa5.6□□□□□ -1.51
HLA-DQB2-230ENST00000427449 PP632Q6XCG6 107 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms