RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 KLKP1Q107X0 134 aa8.08□□□□□ -1.12
IGHV3-47-201ENST00000425060 SPRR2GQ9BYE4 73 aa8.08□□□□□ -1.12
IGHV3-47-201ENST00000425060 MP68P56378 58 aa8.04□□□□□ -1.12
IGHV3-47-201ENST00000425060 A8MUN3 132 aa8.03□□□□□ -1.12
IGHV3-47-201ENST00000425060 MT1BP07438 61 aa8.03□□□□□ -1.12
IGHV3-47-201ENST00000425060 KRTAP19-8Q3LI54 63 aa8.03□□□□□ -1.12
IGHV3-47-201ENST00000425060 NDUFC1O43677 76 aa7.99□□□□□ -1.13
IGHV3-47-201ENST00000425060 H3BPC8 53 aa7.97□□□□□ -1.13
IGHV3-47-201ENST00000425060 IMUPQ9GZP8 106 aa7.97□□□□□ -1.13
IGHV3-47-201ENST00000425060 Q5VV11 94 aa7.96□□□□□ -1.14
IGHV3-47-201ENST00000425060 H0YAA0 97 aa7.95□□□□□ -1.14
IGHV3-47-201ENST00000425060 CRIPTQ9P021 101 aa7.94□□□□□ -1.14
IGHV3-47-201ENST00000425060 MACF1Q9UPN3 7388 aaKnown RBP7.93□□□□□ -1.14
IGHV3-47-201ENST00000425060 SCGB1A1P11684 91 aa7.93□□□□□ -1.14
IGHV3-47-201ENST00000425060 MT-ATP8P03928 68 aa7.88□□□□□ -1.15
IGHV3-47-201ENST00000425060 K7ERU9 68 aa7.85□□□□□ -1.15
IGHV3-47-201ENST00000425060 DMAC1Q96GE9 116 aa7.85□□□□□ -1.15
IGHV3-47-201ENST00000425060 A6NN06 94 aa7.83□□□□□ -1.16
IGHV3-47-201ENST00000425060 ADM2Q7Z4H4 148 aa7.83□□□□□ -1.16
IGHV3-47-201ENST00000425060 KRTAP10-5P60370 271 aa7.81□□□□□ -1.16
IGHV3-47-201ENST00000425060 SYNE2Q8WXH0 6885 aaKnown RBP7.8□□□□□ -1.16
IGHV3-47-201ENST00000425060 KRTAP6-3Q3LI67 103 aa7.77□□□□□ -1.17
IGHV3-47-201ENST00000425060 TRAV7A0A075B6U4 112 aa7.76□□□□□ -1.17
IGHV3-47-201ENST00000425060 SMIM20Q8N5G0 67 aa7.76□□□□□ -1.17
IGHV3-47-201ENST00000425060 P0C880 135 aa7.7□□□□□ -1.18
IGHV3-47-201ENST00000425060 KRTAP3-2Q9BYR7 98 aa7.68□□□□□ -1.18
IGHV3-47-201ENST00000425060 ACYP2P14621 99 aa7.65□□□□□ -1.18
IGHV3-47-201ENST00000425060 C20orf197Q8N268 126 aa7.62□□□□□ -1.19
IGHV3-47-201ENST00000425060 R4GN34 69 aa7.61□□□□□ -1.19
IGHV3-47-201ENST00000425060 SNURFQ9Y675 71 aa7.59□□□□□ -1.19
IGHV3-47-201ENST00000425060 M0QZ58 72 aa7.56□□□□□ -1.2
IGHV3-47-201ENST00000425060 MT1XP80297 61 aa7.54□□□□□ -1.2
IGHV3-47-201ENST00000425060 SERP2Q8N6R1 65 aa7.53□□□□□ -1.2
IGHV3-47-201ENST00000425060 PLAC4Q8WY50 150 aa7.53□□□□□ -1.2
IGHV3-47-201ENST00000425060 SPANXA2-OT1Q8N9U9 137 aa7.51□□□□□ -1.21
IGHV3-47-201ENST00000425060 SPTSSBQ8NFR3 76 aa7.5□□□□□ -1.21
IGHV3-47-201ENST00000425060 PRO2289Q9P1D8 64 aa7.48□□□□□ -1.21
IGHV3-47-201ENST00000425060 KRTAP5-9P26371 169 aa7.47□□□□□ -1.21
IGHV3-47-201ENST00000425060 CHKB-CPT1BH3BT56 60 aa7.46□□□□□ -1.22
IGHV3-47-201ENST00000425060 MUC12Q9UKN1 5478 aa7.45□□□□□ -1.22
IGHV3-47-201ENST00000425060 LINC01554Q52M75 96 aa7.42□□□□□ -1.22
IGHV3-47-201ENST00000425060 KMT2DO14686 5537 aa7.35□□□□□ -1.23
IGHV3-47-201ENST00000425060 NEBP20929 6669 aa7.35□□□□□ -1.23
IGHV3-47-201ENST00000425060 KRTAP12-2P59991 146 aa7.34□□□□□ -1.23
IGHV3-47-201ENST00000425060 COX7CP15954 63 aa7.32□□□□□ -1.24
IGHV3-47-201ENST00000425060 COA5Q86WW8 74 aa7.27□□□□□ -1.25
IGHV3-47-201ENST00000425060 MDN1Q9NU22 5596 aa7.24□□□□□ -1.25
IGHV3-47-201ENST00000425060 KRTAP13-4Q3LI77 160 aa7.24□□□□□ -1.25
IGHV3-47-201ENST00000425060 CYSTM1Q9H1C7 97 aa7.23□□□□□ -1.25
IGHV3-47-201ENST00000425060 H7BZZ5 65 aa7.21□□□□□ -1.26
IGHV3-47-201ENST00000425060 KRTAP8-1Q8IUC2 63 aa7.21□□□□□ -1.26
IGHV3-47-201ENST00000425060 SPRR2FQ96RM1 72 aa7.21□□□□□ -1.26
IGHV3-47-201ENST00000425060 KRTAP4-8A0A0G2JLE6 195 aa7.19□□□□□ -1.26
IGHV3-47-201ENST00000425060 KRTAP10-7P60409 375 aaPredicted RBP7.19□□□□□ -1.26
IGHV3-47-201ENST00000425060 KRTAP4-8Q9BYQ9 185 aa7.19□□□□□ -1.26
IGHV3-47-201ENST00000425060 KRTAP10-12P60413 245 aa7.17□□□□□ -1.26
IGHV3-47-201ENST00000425060 KRTAP20-1Q3LI63 56 aa7.11□□□□□ -1.27
IGHV3-47-201ENST00000425060 SPRR2EP22531 72 aa7.07□□□□□ -1.28
IGHV3-47-201ENST00000425060 SPRR2BP35325 72 aa7.07□□□□□ -1.28
IGHV3-47-201ENST00000425060 SPRR2AP35326 72 aa7.07□□□□□ -1.28
IGHV3-47-201ENST00000425060 SERP1Q9Y6X1 66 aa7.07□□□□□ -1.28
IGHV3-47-201ENST00000425060 SEC61GP60059 68 aa7.06□□□□□ -1.28
IGHV3-47-201ENST00000425060 LCE1AQ5T7P2 110 aa7.05□□□□□ -1.28
IGHV3-47-201ENST00000425060 ANAPC13Q9BS18 74 aa7.05□□□□□ -1.28
IGHV3-47-201ENST00000425060 SPATA8Q6RVD6 105 aa6.99□□□□□ -1.29
IGHV3-47-201ENST00000425060 A0A1B0GU33 70 aa6.98□□□□□ -1.29
IGHV3-47-201ENST00000425060 CAMK2N1Q7Z7J9 78 aa6.98□□□□□ -1.29
IGHV3-47-201ENST00000425060 KRTAP2-3P0C7H8 128 aa6.97□□□□□ -1.29
IGHV3-47-201ENST00000425060 KRTAP2-4Q9BYR9 128 aa6.97□□□□□ -1.29
IGHV3-47-201ENST00000425060 CCDC179H3BU77 68 aa6.96□□□□□ -1.3
IGHV3-47-201ENST00000425060 A0A0D9SG42 100 aa6.95□□□□□ -1.3
IGHV3-47-201ENST00000425060 PCP4P48539 62 aa6.95□□□□□ -1.3
IGHV3-47-201ENST00000425060 KRTAP12-1P59990 96 aa6.88□□□□□ -1.31
IGHV3-47-201ENST00000425060 A0A1B0GU69 56 aa6.87□□□□□ -1.31
IGHV3-47-201ENST00000425060 SPINT4Q6UDR6 99 aa6.85□□□□□ -1.31
IGHV3-47-201ENST00000425060 SPRR2DP22532 72 aa6.84□□□□□ -1.31
IGHV3-47-201ENST00000425060 ATP5EP56381 51 aaPredicted RBP6.82□□□□□ -1.32
IGHV3-47-201ENST00000425060 SMIM26A0A096LP01 95 aa6.77□□□□□ -1.33
IGHV3-47-201ENST00000425060 KRTAP2-2Q9BYT5 123 aa6.76□□□□□ -1.33
IGHV3-47-201ENST00000425060 KRTAP2-1Q9BYU5 128 aa6.76□□□□□ -1.33
IGHV3-47-201ENST00000425060 A8MU10 97 aa6.75□□□□□ -1.33
IGHV3-47-201ENST00000425060 KRTAP19-7Q3SYF9 63 aa6.75□□□□□ -1.33
IGHV3-47-201ENST00000425060 LINC01558Q9Y6Z2 57 aa6.7□□□□□ -1.34
IGHV3-47-201ENST00000425060 MT1EP04732 61 aa6.67□□□□□ -1.34
IGHV3-47-201ENST00000425060 TMEM258P61165 79 aa6.67□□□□□ -1.34
IGHV3-47-201ENST00000425060 PRR15LQ9BU68 103 aa6.67□□□□□ -1.34
IGHV3-47-201ENST00000425060 LCE3BQ5TA77 95 aa6.66□□□□□ -1.34
IGHV3-47-201ENST00000425060 LCE5AQ5TCM9 118 aa6.62□□□□□ -1.35
IGHV3-47-201ENST00000425060 SVIPQ8NHG7 77 aa6.61□□□□□ -1.35
IGHV3-47-201ENST00000425060 KRTAP19-3Q7Z4W3 81 aa6.59□□□□□ -1.35
IGHV3-47-201ENST00000425060 C10orf95Q9H7T3 257 aa6.58□□□□□ -1.36
IGHV3-47-201ENST00000425060 KRTAP19-5Q3LI72 72 aa6.57□□□□□ -1.36
IGHV3-47-201ENST00000425060 TNP1P09430 55 aa6.49□□□□□ -1.37
IGHV3-47-201ENST00000425060 UQCR11O14957 56 aa6.48□□□□□ -1.37
IGHV3-47-201ENST00000425060 LCE3AQ5TA76 89 aa6.46□□□□□ -1.38
IGHV3-47-201ENST00000425060 MT1GP13640 62 aa6.45□□□□□ -1.38
IGHV3-47-201ENST00000425060 DSTQ03001 7570 aaKnown RBP6.4□□□□□ -1.38
IGHV3-47-201ENST00000425060 MT1LQ93083 61 aa6.39□□□□□ -1.39
IGHV3-47-201ENST00000425060 RPS28P62857 69 aaKnown RBP6.38□□□□□ -1.39
IGHV3-47-201ENST00000425060 PP632Q6XCG6 107 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms