RNA–Protein interactions for RNA: ENST00000424439.2

NHLRC4-201, Transcript of NHL repeat containing 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene NHLRC4, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC4-201ENST00000424439 KRTAP10-4P60372 401 aaPredicted RBP12.27□□□□□ -0.45
NHLRC4-201ENST00000424439 FAT1Q14517 4588 aa12.25□□□□□ -0.45
NHLRC4-201ENST00000424439 PCLOQ9Y6V0 5065 aa12.21□□□□□ -0.45
NHLRC4-201ENST00000424439 KRTAP17-1Q9BYP8 105 aa12.17□□□□□ -0.46
NHLRC4-201ENST00000424439 ABCA13Q86UQ4 5058 aa12.14□□□□□ -0.47
NHLRC4-201ENST00000424439 KRTAP4-5Q9BYR2 181 aa12.12□□□□□ -0.47
NHLRC4-201ENST00000424439 ROMO1P60602 79 aa12.1□□□□□ -0.47
NHLRC4-201ENST00000424439 H3BS24 57 aa12.09□□□□□ -0.47
NHLRC4-201ENST00000424439 KRTAP10-6P60371 365 aaPredicted RBP12.04□□□□□ -0.48
NHLRC4-201ENST00000424439 RPL37P61927 97 aaKnown RBP12.02□□□□□ -0.48
NHLRC4-201ENST00000424439 KRTAP3-3Q9BYR6 98 aa12.01□□□□□ -0.49
NHLRC4-201ENST00000424439 KRTAP3-2Q9BYR7 98 aa11.93□□□□□ -0.5
NHLRC4-201ENST00000424439 FLG2Q5D862 2391 aaPredicted RBP11.93□□□□□ -0.5
NHLRC4-201ENST00000424439 KRTAP13-4Q3LI77 160 aa11.9□□□□□ -0.51
NHLRC4-201ENST00000424439 CRIPTQ9P021 101 aa11.9□□□□□ -0.51
NHLRC4-201ENST00000424439 Q5VSD8 79 aa11.89□□□□□ -0.51
NHLRC4-201ENST00000424439 FAT3Q8TDW7 4589 aa11.85□□□□□ -0.51
NHLRC4-201ENST00000424439 S4R3F8 94 aa11.85□□□□□ -0.51
NHLRC4-201ENST00000424439 TNXBP22105 4242 aa11.81□□□□□ -0.52
NHLRC4-201ENST00000424439 KRTAP10-8P60410 259 aa11.8□□□□□ -0.52
NHLRC4-201ENST00000424439 A0A0D9SG42 100 aa11.76□□□□□ -0.53
NHLRC4-201ENST00000424439 LRP1Q07954 4544 aaKnown RBP11.75□□□□□ -0.53
NHLRC4-201ENST00000424439 MYCBP2O75592 4640 aa11.75□□□□□ -0.53
NHLRC4-201ENST00000424439 TPRXLQ17RH7 258 aa11.72□□□□□ -0.53
NHLRC4-201ENST00000424439 XP32Q5T750 250 aa11.72□□□□□ -0.53
NHLRC4-201ENST00000424439 P0C880 135 aa11.69□□□□□ -0.54
NHLRC4-201ENST00000424439 DMBT1Q9UGM3 2413 aaPredicted RBP11.67□□□□□ -0.54
NHLRC4-201ENST00000424439 HERC1Q15751 4861 aa11.63□□□□□ -0.55
NHLRC4-201ENST00000424439 KRTAP12-2P59991 146 aa11.55□□□□□ -0.56
NHLRC4-201ENST00000424439 SPINT4Q6UDR6 99 aa11.55□□□□□ -0.56
NHLRC4-201ENST00000424439 MT1HL1P0DM35 61 aa11.51□□□□□ -0.57
NHLRC4-201ENST00000424439 KRTAP12-1P59990 96 aa11.5□□□□□ -0.57
NHLRC4-201ENST00000424439 C10orf95Q9H7T3 257 aa11.49□□□□□ -0.57
NHLRC4-201ENST00000424439 J3QL48 77 aa11.47□□□□□ -0.57
NHLRC4-201ENST00000424439 M0QZ58 72 aa11.45□□□□□ -0.58
NHLRC4-201ENST00000424439 KRTAP15-1Q3LI76 137 aa11.42□□□□□ -0.58
NHLRC4-201ENST00000424439 HMCN2Q8NDA2 5059 aa11.21□□□□□ -0.62
NHLRC4-201ENST00000424439 NDUFAF8A1L188 74 aa11.13□□□□□ -0.63
NHLRC4-201ENST00000424439 LPAP08519 4548 aa10.97□□□□□ -0.65
NHLRC4-201ENST00000424439 LRP2P98164 4655 aa10.97□□□□□ -0.65
NHLRC4-201ENST00000424439 R4GN34 69 aa10.97□□□□□ -0.65
NHLRC4-201ENST00000424439 UBR4Q5T4S7 5183 aa10.95□□□□□ -0.66
NHLRC4-201ENST00000424439 SEC61BP60468 96 aaKnown RBP10.76□□□□□ -0.69
NHLRC4-201ENST00000424439 PLAC4Q8WY50 150 aa10.73□□□□□ -0.69
NHLRC4-201ENST00000424439 LORP23490 312 aaPredicted RBP10.71□□□□□ -0.69
NHLRC4-201ENST00000424439 PP632Q6XCG6 107 aa10.65□□□□□ -0.7
NHLRC4-201ENST00000424439 MUC17Q685J3 4493 aa10.65□□□□□ -0.7
NHLRC4-201ENST00000424439 RNF213Q63HN8 5207 aa10.65□□□□□ -0.71
NHLRC4-201ENST00000424439 KRTAP4-1Q9BYQ7 146 aa10.53□□□□□ -0.72
NHLRC4-201ENST00000424439 KRTAP19-2Q3LHN2 52 aa10.5□□□□□ -0.73
NHLRC4-201ENST00000424439 CAMK2N1Q7Z7J9 78 aa10.44□□□□□ -0.74
NHLRC4-201ENST00000424439 MUC2Q02817 5179 aa10.34□□□□□ -0.75
NHLRC4-201ENST00000424439 LUZP6Q538Z0 58 aa10.32□□□□□ -0.76
NHLRC4-201ENST00000424439 KRTAP23-1A1A580 65 aa10.3□□□□□ -0.76
NHLRC4-201ENST00000424439 TNP1P09430 55 aa10.18□□□□□ -0.78
NHLRC4-201ENST00000424439 FLGP20930 4061 aaPredicted RBP10.13□□□□□ -0.79
NHLRC4-201ENST00000424439 FAT4Q6V0I7 4981 aa10.09□□□□□ -0.79
NHLRC4-201ENST00000424439 SPRR5A0A1B0GTR4 108 aa10.06□□□□□ -0.8
NHLRC4-201ENST00000424439 A0A0A0MQY5 61 aa10.05□□□□□ -0.8
NHLRC4-201ENST00000424439 LCE2AQ5TA79 106 aaPredicted RBP9.95□□□□□ -0.82
NHLRC4-201ENST00000424439 LCE2CQ5TA81 110 aa9.91□□□□□ -0.82
NHLRC4-201ENST00000424439 SPRR2GQ9BYE4 73 aa9.82□□□□□ -0.84
NHLRC4-201ENST00000424439 KRTAP19-1Q8IUB9 90 aa9.68□□□□□ -0.86
NHLRC4-201ENST00000424439 MT1HP80294 61 aa9.66□□□□□ -0.86
NHLRC4-201ENST00000424439 KRTAP9-2Q9BYQ4 174 aa9.63□□□□□ -0.87
NHLRC4-201ENST00000424439 M0R2T5 61 aa9.58□□□□□ -0.88
NHLRC4-201ENST00000424439 LCE3AQ5TA76 89 aa9.53□□□□□ -0.88
NHLRC4-201ENST00000424439 KRTAP8-1Q8IUC2 63 aa9.41□□□□□ -0.9
NHLRC4-201ENST00000424439 MT2AP02795 61 aa9.39□□□□□ -0.91
NHLRC4-201ENST00000424439 LCE2DQ5TA82 110 aaPredicted RBP9.38□□□□□ -0.91
NHLRC4-201ENST00000424439 KRTAP9-8Q9BYQ0 159 aa9.38□□□□□ -0.91
NHLRC4-201ENST00000424439 MT1FP04733 61 aa9.35□□□□□ -0.91
NHLRC4-201ENST00000424439 KRTAP19-8Q3LI54 63 aa9.35□□□□□ -0.91
NHLRC4-201ENST00000424439 KRTAP10-10P60014 251 aa9.32□□□□□ -0.92
NHLRC4-201ENST00000424439 KRTAP9-6A0A140TA67 174 aa9.27□□□□□ -0.93
NHLRC4-201ENST00000424439 PRO2289Q9P1D8 64 aa9.18□□□□□ -0.94
NHLRC4-201ENST00000424439 KRTAP10-5P60370 271 aa9.17□□□□□ -0.94
NHLRC4-201ENST00000424439 FSIP2Q5CZC0 6907 aa9.16□□□□□ -0.94
NHLRC4-201ENST00000424439 INE1O15225 51 aa9.15□□□□□ -0.94
NHLRC4-201ENST00000424439 MT1XP80297 61 aa9.14□□□□□ -0.95
NHLRC4-201ENST00000424439 MT1BP07438 61 aa9.14□□□□□ -0.95
NHLRC4-201ENST00000424439 KRTAP12-3P60328 96 aa9.1□□□□□ -0.95
NHLRC4-201ENST00000424439 CRCT1Q9UGL9 99 aa9.1□□□□□ -0.95
NHLRC4-201ENST00000424439 KRTAP10-12P60413 245 aa9.07□□□□□ -0.96
NHLRC4-201ENST00000424439 KRTAP9-3Q9BYQ3 159 aa9.02□□□□□ -0.97
NHLRC4-201ENST00000424439 KRTAP10-7P60409 375 aaPredicted RBP8.86□□□□□ -0.99
NHLRC4-201ENST00000424439 USH2AO75445 5202 aa8.85□□□□□ -0.99
NHLRC4-201ENST00000424439 SSPOA2VEC9 5147 aa8.76□□□□□ -1.01
NHLRC4-201ENST00000424439 LCE2BO14633 110 aa8.74□□□□□ -1.01
NHLRC4-201ENST00000424439 LCE3CQ5T5A8 94 aa8.61□□□□□ -1.03
NHLRC4-201ENST00000424439 KRTAP19-5Q3LI72 72 aa8.57□□□□□ -1.04
NHLRC4-201ENST00000424439 FCGBPQ9Y6R7 5405 aaPredicted RBP8.55□□□□□ -1.04
NHLRC4-201ENST00000424439 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.48□□□□□ -1.05
NHLRC4-201ENST00000424439 KRTAP19-6Q3LI70 58 aa8.41□□□□□ -1.06
NHLRC4-201ENST00000424439 KRTAP9-7A8MTY7 169 aa8.34□□□□□ -1.07
NHLRC4-201ENST00000424439 KRTAP19-4Q3LI73 84 aa8.3□□□□□ -1.08
NHLRC4-201ENST00000424439 KRTAP9-6A8MVA2 160 aa8.26□□□□□ -1.09
NHLRC4-201ENST00000424439 MACF1Q9UPN3 7388 aaKnown RBP8.24□□□□□ -1.09
NHLRC4-201ENST00000424439 KRTAP2-3P0C7H8 128 aa8.22□□□□□ -1.09
NHLRC4-201ENST00000424439 KRTAP2-4Q9BYR9 128 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms