RNA–Protein interactions for RNA: ENST00000422190.6

ATP2C1-203, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-203ENST00000422190 KIAA1109Q2LD37 5005 aa3.3□□□□□ -1.88
ATP2C1-203ENST00000422190 RPL37P61927 97 aaKnown RBP3.29□□□□□ -1.88
ATP2C1-203ENST00000422190 XP32Q5T750 250 aa3.29□□□□□ -1.88
ATP2C1-203ENST00000422190 J3QL48 77 aa3.28□□□□□ -1.88
ATP2C1-203ENST00000422190 MT1HL1P0DM35 61 aa3.28□□□□□ -1.89
ATP2C1-203ENST00000422190 A0A1B0GU33 70 aa3.27□□□□□ -1.89
ATP2C1-203ENST00000422190 PRAC1Q96KF2 57 aa3.26□□□□□ -1.89
ATP2C1-203ENST00000422190 H0YAA0 97 aa3.25□□□□□ -1.89
ATP2C1-203ENST00000422190 ADM2Q7Z4H4 148 aa3.25□□□□□ -1.89
ATP2C1-203ENST00000422190 H1FX-AS1Q4G0G2 97 aa3.25□□□□□ -1.89
ATP2C1-203ENST00000422190 RBM12B-AS1Q9P1G2 102 aa3.25□□□□□ -1.89
ATP2C1-203ENST00000422190 S4R3F8 94 aa3.21□□□□□ -1.9
ATP2C1-203ENST00000422190 KRTAP4-5Q9BYR2 181 aa3.2□□□□□ -1.9
ATP2C1-203ENST00000422190 EPPK1P58107 5090 aaKnown RBP3.2□□□□□ -1.9
ATP2C1-203ENST00000422190 LRP2P98164 4655 aa3.17□□□□□ -1.9
ATP2C1-203ENST00000422190 KRTAP10-6P60371 365 aaPredicted RBP3.17□□□□□ -1.9
ATP2C1-203ENST00000422190 TPRXLQ17RH7 258 aa3.17□□□□□ -1.9
ATP2C1-203ENST00000422190 A0A0D9SG42 100 aa3.16□□□□□ -1.9
ATP2C1-203ENST00000422190 CSAG1Q6PB30 78 aa3.15□□□□□ -1.9
ATP2C1-203ENST00000422190 K7ERS5 55 aa3.15□□□□□ -1.91
ATP2C1-203ENST00000422190 P0C880 135 aa3.15□□□□□ -1.91
ATP2C1-203ENST00000422190 LPAP08519 4548 aa3.15□□□□□ -1.91
ATP2C1-203ENST00000422190 KRTAP13-4Q3LI77 160 aa3.14□□□□□ -1.91
ATP2C1-203ENST00000422190 ABCA13Q86UQ4 5058 aa3.12□□□□□ -1.91
ATP2C1-203ENST00000422190 CRIPTQ9P021 101 aa3.1□□□□□ -1.91
ATP2C1-203ENST00000422190 LINC01554Q52M75 96 aa3.09□□□□□ -1.91
ATP2C1-203ENST00000422190 SEC61BP60468 96 aaKnown RBP3.08□□□□□ -1.92
ATP2C1-203ENST00000422190 SPINT4Q6UDR6 99 aa3.06□□□□□ -1.92
ATP2C1-203ENST00000422190 HERC2O95714 4834 aa3.05□□□□□ -1.92
ATP2C1-203ENST00000422190 ROMO1P60602 79 aa3.05□□□□□ -1.92
ATP2C1-203ENST00000422190 KRTAP25-1Q3LHN0 102 aa3.05□□□□□ -1.92
ATP2C1-203ENST00000422190 KRTAP4-1Q9BYQ7 146 aa3.04□□□□□ -1.92
ATP2C1-203ENST00000422190 KRTAP12-2P59991 146 aa3.04□□□□□ -1.92
ATP2C1-203ENST00000422190 M0QZ58 72 aa3.01□□□□□ -1.93
ATP2C1-203ENST00000422190 KRTAP12-1P59990 96 aa3.01□□□□□ -1.93
ATP2C1-203ENST00000422190 R4GN34 69 aa3□□□□□ -1.93
ATP2C1-203ENST00000422190 MUC17Q685J3 4493 aa2.98□□□□□ -1.93
ATP2C1-203ENST00000422190 H3BS24 57 aa2.98□□□□□ -1.93
ATP2C1-203ENST00000422190 C10orf95Q9H7T3 257 aa2.98□□□□□ -1.93
ATP2C1-203ENST00000422190 LORP23490 312 aaPredicted RBP2.97□□□□□ -1.93
ATP2C1-203ENST00000422190 BIRC6Q9NR09 4857 aa2.97□□□□□ -1.93
ATP2C1-203ENST00000422190 LCE2BO14633 110 aa2.95□□□□□ -1.94
ATP2C1-203ENST00000422190 KRTAP19-2Q3LHN2 52 aa2.94□□□□□ -1.94
ATP2C1-203ENST00000422190 MUC2Q02817 5179 aa2.93□□□□□ -1.94
ATP2C1-203ENST00000422190 HERC1Q15751 4861 aa2.9□□□□□ -1.95
ATP2C1-203ENST00000422190 FLGP20930 4061 aaPredicted RBP2.88□□□□□ -1.95
ATP2C1-203ENST00000422190 PCLOQ9Y6V0 5065 aa2.86□□□□□ -1.95
ATP2C1-203ENST00000422190 A0A0A0MQY5 61 aa2.85□□□□□ -1.95
ATP2C1-203ENST00000422190 CAMK2N1Q7Z7J9 78 aa2.85□□□□□ -1.95
ATP2C1-203ENST00000422190 HMCN2Q8NDA2 5059 aa2.84□□□□□ -1.95
ATP2C1-203ENST00000422190 LOC100996750A0A140TA64 210 aa2.83□□□□□ -1.96
ATP2C1-203ENST00000422190 KRTAP4-6Q9BYQ5 205 aa2.83□□□□□ -1.96
ATP2C1-203ENST00000422190 LCE2CQ5TA81 110 aa2.82□□□□□ -1.96
ATP2C1-203ENST00000422190 M0R2T5 61 aa2.81□□□□□ -1.96
ATP2C1-203ENST00000422190 LCE2AQ5TA79 106 aaPredicted RBP2.8□□□□□ -1.96
ATP2C1-203ENST00000422190 FAT4Q6V0I7 4981 aa2.79□□□□□ -1.96
ATP2C1-203ENST00000422190 RNF213Q63HN8 5207 aa2.76□□□□□ -1.97
ATP2C1-203ENST00000422190 KRTAP15-1Q3LI76 137 aa2.75□□□□□ -1.97
ATP2C1-203ENST00000422190 UBR4Q5T4S7 5183 aa2.75□□□□□ -1.97
ATP2C1-203ENST00000422190 MT1HP80294 61 aa2.74□□□□□ -1.97
ATP2C1-203ENST00000422190 KRTAP10-10P60014 251 aa2.72□□□□□ -1.97
ATP2C1-203ENST00000422190 PLAC4Q8WY50 150 aa2.72□□□□□ -1.97
ATP2C1-203ENST00000422190 TNP1P09430 55 aa2.71□□□□□ -1.98
ATP2C1-203ENST00000422190 KRTAP19-1Q8IUB9 90 aa2.71□□□□□ -1.98
ATP2C1-203ENST00000422190 NDUFAF8A1L188 74 aa2.7□□□□□ -1.98
ATP2C1-203ENST00000422190 SPRR2GQ9BYE4 73 aa2.7□□□□□ -1.98
ATP2C1-203ENST00000422190 PP632Q6XCG6 107 aa2.7□□□□□ -1.98
ATP2C1-203ENST00000422190 MT1FP04733 61 aa2.69□□□□□ -1.98
ATP2C1-203ENST00000422190 MT2AP02795 61 aa2.69□□□□□ -1.98
ATP2C1-203ENST00000422190 KRTAP9-8Q9BYQ0 159 aa2.67□□□□□ -1.98
ATP2C1-203ENST00000422190 KRTAP23-1A1A580 65 aa2.6□□□□□ -1.99
ATP2C1-203ENST00000422190 KRTAP19-8Q3LI54 63 aa2.59□□□□□ -1.99
ATP2C1-203ENST00000422190 MT1BP07438 61 aa2.58□□□□□ -2
ATP2C1-203ENST00000422190 LCE3AQ5TA76 89 aa2.58□□□□□ -2
ATP2C1-203ENST00000422190 LUZP6Q538Z0 58 aa2.57□□□□□ -2
ATP2C1-203ENST00000422190 KRTAP9-3Q9BYQ3 159 aa2.56□□□□□ -2
ATP2C1-203ENST00000422190 KRTAP10-5P60370 271 aa2.55□□□□□ -2
ATP2C1-203ENST00000422190 MT1XP80297 61 aa2.55□□□□□ -2
ATP2C1-203ENST00000422190 KRTAP10-12P60413 245 aa2.49□□□□□ -2.01
ATP2C1-203ENST00000422190 KRTAP10-7P60409 375 aaPredicted RBP2.49□□□□□ -2.01
ATP2C1-203ENST00000422190 KRTAP8-1Q8IUC2 63 aa2.48□□□□□ -2.01
ATP2C1-203ENST00000422190 KRTAP4-8Q9BYQ9 185 aa2.48□□□□□ -2.01
ATP2C1-203ENST00000422190 SPRR5A0A1B0GTR4 108 aa2.47□□□□□ -2.01
ATP2C1-203ENST00000422190 PRO2289Q9P1D8 64 aa2.47□□□□□ -2.01
ATP2C1-203ENST00000422190 KRTAP12-3P60328 96 aa2.46□□□□□ -2.02
ATP2C1-203ENST00000422190 USH2AO75445 5202 aa2.43□□□□□ -2.02
ATP2C1-203ENST00000422190 KRTAP19-5Q3LI72 72 aa2.38□□□□□ -2.03
ATP2C1-203ENST00000422190 KMT2DO14686 5537 aa2.37□□□□□ -2.03
ATP2C1-203ENST00000422190 KRTAP4-8A0A0G2JLE6 195 aa2.36□□□□□ -2.03
ATP2C1-203ENST00000422190 FSIP2Q5CZC0 6907 aa2.34□□□□□ -2.03
ATP2C1-203ENST00000422190 KRTAP19-4Q3LI73 84 aa2.3□□□□□ -2.04
ATP2C1-203ENST00000422190 KRTAP4-12Q9BQ66 201 aa2.3□□□□□ -2.04
ATP2C1-203ENST00000422190 LCE3CQ5T5A8 94 aa2.29□□□□□ -2.04
ATP2C1-203ENST00000422190 KRTAP4-7Q9BYR0 210 aa2.29□□□□□ -2.04
ATP2C1-203ENST00000422190 KRTAP9-2Q9BYQ4 174 aa2.28□□□□□ -2.04
ATP2C1-203ENST00000422190 KRTAP19-7Q3SYF9 63 aa2.27□□□□□ -2.05
ATP2C1-203ENST00000422190 SSPOA2VEC9 5147 aa2.26□□□□□ -2.05
ATP2C1-203ENST00000422190 KRTAP9-6A0A140TA67 174 aa2.24□□□□□ -2.05
ATP2C1-203ENST00000422190 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.23□□□□□ -2.05
ATP2C1-203ENST00000422190 KRTAP19-6Q3LI70 58 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms