RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 COX6B2Q6YFQ2 88 aa4.02□□□□□ -1.77
BDNF-209ENST00000420794 FAT1Q14517 4588 aa4.02□□□□□ -1.77
BDNF-209ENST00000420794 DNAH8Q96JB1 4490 aa4.02□□□□□ -1.77
BDNF-209ENST00000420794 KIAA1109Q2LD37 5005 aa4.01□□□□□ -1.77
BDNF-209ENST00000420794 RYR3Q15413 4870 aa4□□□□□ -1.77
BDNF-209ENST00000420794 PKD1P98161 4303 aa3.99□□□□□ -1.77
BDNF-209ENST00000420794 PKHD1P08F94 4074 aa3.97□□□□□ -1.77
BDNF-209ENST00000420794 RYR1P21817 5038 aa3.97□□□□□ -1.77
BDNF-209ENST00000420794 FRAS1Q86XX4 4008 aa3.97□□□□□ -1.77
BDNF-209ENST00000420794 APOBP04114 4563 aaKnown RBP3.97□□□□□ -1.77
BDNF-209ENST00000420794 VPS13BQ7Z7G8 4022 aa3.95□□□□□ -1.78
BDNF-209ENST00000420794 KRTAP17-1Q9BYP8 105 aa3.94□□□□□ -1.78
BDNF-209ENST00000420794 SPATA8Q6RVD6 105 aa3.93□□□□□ -1.78
BDNF-209ENST00000420794 BIRC6Q9NR09 4857 aa3.89□□□□□ -1.79
BDNF-209ENST00000420794 S4R3F8 94 aa3.88□□□□□ -1.79
BDNF-209ENST00000420794 HSPG2P98160 4391 aa3.88□□□□□ -1.79
BDNF-209ENST00000420794 EPPK1P58107 5090 aaKnown RBP3.87□□□□□ -1.79
BDNF-209ENST00000420794 H1FX-AS1Q4G0G2 97 aa3.87□□□□□ -1.79
BDNF-209ENST00000420794 M0R2T5 61 aa3.84□□□□□ -1.8
BDNF-209ENST00000420794 LRP1Q07954 4544 aaKnown RBP3.81□□□□□ -1.8
BDNF-209ENST00000420794 A0A1B0GU33 70 aa3.81□□□□□ -1.8
BDNF-209ENST00000420794 LCE2DQ5TA82 110 aaPredicted RBP3.8□□□□□ -1.8
BDNF-209ENST00000420794 HERC2O95714 4834 aa3.8□□□□□ -1.8
BDNF-209ENST00000420794 KRTAP3-3Q9BYR6 98 aa3.8□□□□□ -1.8
BDNF-209ENST00000420794 KRTAP3-2Q9BYR7 98 aa3.8□□□□□ -1.8
BDNF-209ENST00000420794 A0A0D9SG42 100 aa3.77□□□□□ -1.81
BDNF-209ENST00000420794 P0C880 135 aa3.77□□□□□ -1.81
BDNF-209ENST00000420794 MYCBP2O75592 4640 aa3.76□□□□□ -1.81
BDNF-209ENST00000420794 FAT3Q8TDW7 4589 aa3.72□□□□□ -1.81
BDNF-209ENST00000420794 ABCA13Q86UQ4 5058 aa3.7□□□□□ -1.82
BDNF-209ENST00000420794 KRTAP3-1Q9BYR8 98 aa3.7□□□□□ -1.82
BDNF-209ENST00000420794 KRTAP23-1A1A580 65 aa3.68□□□□□ -1.82
BDNF-209ENST00000420794 R4GN34 69 aa3.67□□□□□ -1.82
BDNF-209ENST00000420794 PKHD1L1Q86WI1 4243 aa3.65□□□□□ -1.82
BDNF-209ENST00000420794 TNXBP22105 4242 aa3.65□□□□□ -1.82
BDNF-209ENST00000420794 PLAC4Q8WY50 150 aa3.64□□□□□ -1.83
BDNF-209ENST00000420794 M0QZ58 72 aa3.62□□□□□ -1.83
BDNF-209ENST00000420794 KRTAP4-1Q9BYQ7 146 aa3.61□□□□□ -1.83
BDNF-209ENST00000420794 PCLOQ9Y6V0 5065 aa3.59□□□□□ -1.83
BDNF-209ENST00000420794 C10orf95Q9H7T3 257 aa3.59□□□□□ -1.84
BDNF-209ENST00000420794 H0YAA0 97 aa3.56□□□□□ -1.84
BDNF-209ENST00000420794 LRP2P98164 4655 aa3.55□□□□□ -1.84
BDNF-209ENST00000420794 KRTAP10-10P60014 251 aa3.54□□□□□ -1.84
BDNF-209ENST00000420794 HERC1Q15751 4861 aa3.53□□□□□ -1.84
BDNF-209ENST00000420794 PP632Q6XCG6 107 aa3.5□□□□□ -1.85
BDNF-209ENST00000420794 LPAP08519 4548 aa3.5□□□□□ -1.85
BDNF-209ENST00000420794 KRTAP15-1Q3LI76 137 aa3.49□□□□□ -1.85
BDNF-209ENST00000420794 PRO2289Q9P1D8 64 aa3.48□□□□□ -1.85
BDNF-209ENST00000420794 KRTAP10-6P60371 365 aaPredicted RBP3.46□□□□□ -1.86
BDNF-209ENST00000420794 MT1HP80294 61 aa3.44□□□□□ -1.86
BDNF-209ENST00000420794 HMCN2Q8NDA2 5059 aa3.44□□□□□ -1.86
BDNF-209ENST00000420794 LCE2CQ5TA81 110 aa3.38□□□□□ -1.87
BDNF-209ENST00000420794 KRTAP19-2Q3LHN2 52 aa3.37□□□□□ -1.87
BDNF-209ENST00000420794 KRTAP13-4Q3LI77 160 aa3.36□□□□□ -1.87
BDNF-209ENST00000420794 LCE2AQ5TA79 106 aaPredicted RBP3.34□□□□□ -1.88
BDNF-209ENST00000420794 MUC17Q685J3 4493 aa3.34□□□□□ -1.88
BDNF-209ENST00000420794 INE1O15225 51 aa3.33□□□□□ -1.88
BDNF-209ENST00000420794 LCE2BO14633 110 aa3.32□□□□□ -1.88
BDNF-209ENST00000420794 RNF213Q63HN8 5207 aa3.32□□□□□ -1.88
BDNF-209ENST00000420794 MT2AP02795 61 aa3.32□□□□□ -1.88
BDNF-209ENST00000420794 UBR4Q5T4S7 5183 aa3.32□□□□□ -1.88
BDNF-209ENST00000420794 KRTAP12-1P59990 96 aa3.32□□□□□ -1.88
BDNF-209ENST00000420794 LORP23490 312 aaPredicted RBP3.31□□□□□ -1.88
BDNF-209ENST00000420794 KRTAP12-2P59991 146 aa3.3□□□□□ -1.88
BDNF-209ENST00000420794 MT1FP04733 61 aa3.28□□□□□ -1.88
BDNF-209ENST00000420794 TNP1P09430 55 aa3.28□□□□□ -1.88
BDNF-209ENST00000420794 MUC2Q02817 5179 aa3.26□□□□□ -1.89
BDNF-209ENST00000420794 SPRR2GQ9BYE4 73 aa3.25□□□□□ -1.89
BDNF-209ENST00000420794 KRTAP9-8Q9BYQ0 159 aa3.24□□□□□ -1.89
BDNF-209ENST00000420794 FAT4Q6V0I7 4981 aa3.24□□□□□ -1.89
BDNF-209ENST00000420794 FLGP20930 4061 aaPredicted RBP3.24□□□□□ -1.89
BDNF-209ENST00000420794 KRTAP19-1Q8IUB9 90 aa3.18□□□□□ -1.9
BDNF-209ENST00000420794 KRTAP9-3Q9BYQ3 159 aa3.14□□□□□ -1.91
BDNF-209ENST00000420794 KRTAP19-8Q3LI54 63 aa3.14□□□□□ -1.91
BDNF-209ENST00000420794 MT1BP07438 61 aa3.06□□□□□ -1.92
BDNF-209ENST00000420794 KRTAP10-12P60413 245 aa3.02□□□□□ -1.93
BDNF-209ENST00000420794 KRTAP10-5P60370 271 aa2.98□□□□□ -1.93
BDNF-209ENST00000420794 MT1XP80297 61 aa2.97□□□□□ -1.93
BDNF-209ENST00000420794 KRTAP9-2Q9BYQ4 174 aa2.94□□□□□ -1.94
BDNF-209ENST00000420794 LCE3AQ5TA76 89 aa2.93□□□□□ -1.94
BDNF-209ENST00000420794 KRTAP19-6Q3LI70 58 aa2.91□□□□□ -1.94
BDNF-209ENST00000420794 KRTAP8-1Q8IUC2 63 aa2.9□□□□□ -1.95
BDNF-209ENST00000420794 KRTAP12-3P60328 96 aa2.89□□□□□ -1.95
BDNF-209ENST00000420794 CRCT1Q9UGL9 99 aa2.89□□□□□ -1.95
BDNF-209ENST00000420794 KRTAP10-7P60409 375 aaPredicted RBP2.89□□□□□ -1.95
BDNF-209ENST00000420794 FSIP2Q5CZC0 6907 aa2.87□□□□□ -1.95
BDNF-209ENST00000420794 USH2AO75445 5202 aa2.82□□□□□ -1.96
BDNF-209ENST00000420794 KRTAP19-5Q3LI72 72 aa2.79□□□□□ -1.96
BDNF-209ENST00000420794 KRTAP4-8A0A0G2JLE6 195 aa2.78□□□□□ -1.97
BDNF-209ENST00000420794 KRTAP4-8Q9BYQ9 185 aa2.78□□□□□ -1.97
BDNF-209ENST00000420794 SPRR2FQ96RM1 72 aa2.77□□□□□ -1.97
BDNF-209ENST00000420794 KRTAP9-6A0A140TA67 174 aa2.75□□□□□ -1.97
BDNF-209ENST00000420794 KRTAP19-4Q3LI73 84 aa2.71□□□□□ -1.97
BDNF-209ENST00000420794 SSPOA2VEC9 5147 aa2.69□□□□□ -1.98
BDNF-209ENST00000420794 FCGBPQ9Y6R7 5405 aaPredicted RBP2.64□□□□□ -1.99
BDNF-209ENST00000420794 MT1EP04732 61 aa2.64□□□□□ -1.99
BDNF-209ENST00000420794 LCE3CQ5T5A8 94 aa2.63□□□□□ -1.99
BDNF-209ENST00000420794 SPRR2EP22531 72 aa2.63□□□□□ -1.99
BDNF-209ENST00000420794 SPRR2BP35325 72 aa2.63□□□□□ -1.99
BDNF-209ENST00000420794 SPRR2AP35326 72 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms