RNA–Protein interactions for RNA: ENST00000420047.1

SEMA3A-202, Transcript of semaphorin 3A, humanhuman

TSL 4

Gene SEMA3A, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-202ENST00000420047 A8MWP4 228 aa1.58□□□□□ -2.16
SEMA3A-202ENST00000420047 K7EQZ3 153 aa1.58□□□□□ -2.16
SEMA3A-202ENST00000420047 BPY2O14599 106 aa1.58□□□□□ -2.16
SEMA3A-202ENST00000420047 NDUFB1O75438 58 aa1.58□□□□□ -2.16
SEMA3A-202ENST00000420047 NREPQ16612 68 aa1.58□□□□□ -2.16
SEMA3A-202ENST00000420047 C4orf26Q17RF5 130 aa1.58□□□□□ -2.16
SEMA3A-202ENST00000420047 PRR15Q8IV56 129 aa1.58□□□□□ -2.16
SEMA3A-202ENST00000420047 MRPL34Q9BQ48 92 aaKnown RBP1.58□□□□□ -2.16
SEMA3A-202ENST00000420047 ATXN8Q156A1 80 aa1.57□□□□□ -2.16
SEMA3A-202ENST00000420047 H1FX-AS1Q4G0G2 97 aa1.57□□□□□ -2.16
SEMA3A-202ENST00000420047 C5orf47Q569G3 176 aa1.57□□□□□ -2.16
SEMA3A-202ENST00000420047 A0A087WVE0 104 aa1.56□□□□□ -2.16
SEMA3A-202ENST00000420047 LOC110117498A0A087WWA1 95 aa1.56□□□□□ -2.16
SEMA3A-202ENST00000420047 hDV103S1A0JD37 113 aa1.56□□□□□ -2.16
SEMA3A-202ENST00000420047 HCG22E2RYF7 251 aa1.56□□□□□ -2.16
SEMA3A-202ENST00000420047 H3BQ85 93 aa1.56□□□□□ -2.16
SEMA3A-202ENST00000420047 J3KT08 172 aa1.56□□□□□ -2.16
SEMA3A-202ENST00000420047 TAX1BP3O14907 124 aa1.56□□□□□ -2.16
SEMA3A-202ENST00000420047 MT1BP07438 61 aa1.56□□□□□ -2.16
SEMA3A-202ENST00000420047 JMJD7-PLA2G4BH0Y9G9 81 aa1.55□□□□□ -2.16
SEMA3A-202ENST00000420047 KRTAP6-3Q3LI67 103 aa1.55□□□□□ -2.16
SEMA3A-202ENST00000420047 TMEM254Q8TBM7 123 aa1.55□□□□□ -2.16
SEMA3A-202ENST00000420047 LOC105371267A0A1B0GV96 52 aa1.54□□□□□ -2.16
SEMA3A-202ENST00000420047 M0R143 59 aa1.54□□□□□ -2.16
SEMA3A-202ENST00000420047 A0A1W2PPM0 123 aa1.53□□□□□ -2.16
SEMA3A-202ENST00000420047 TSTD3H0UI37 97 aa1.53□□□□□ -2.16
SEMA3A-202ENST00000420047 CASC2Q6XLA1 102 aa1.53□□□□□ -2.16
SEMA3A-202ENST00000420047 LINC00846Q9NV44 126 aa1.53□□□□□ -2.16
SEMA3A-202ENST00000420047 FAM236AA0A1B0GUQ0 79 aa1.52□□□□□ -2.17
SEMA3A-202ENST00000420047 FAM236BA0A1B0GV22 79 aa1.52□□□□□ -2.17
SEMA3A-202ENST00000420047 LCA10Q71F78 164 aa1.52□□□□□ -2.17
SEMA3A-202ENST00000420047 C1orf64Q8NEQ6 169 aa1.52□□□□□ -2.17
SEMA3A-202ENST00000420047 A6NN06 94 aa1.51□□□□□ -2.17
SEMA3A-202ENST00000420047 K7EP34 96 aa1.51□□□□□ -2.17
SEMA3A-202ENST00000420047 PDE6GP18545 87 aa1.51□□□□□ -2.17
SEMA3A-202ENST00000420047 KRTAP12-4P60329 112 aa1.51□□□□□ -2.17
SEMA3A-202ENST00000420047 C7orf65Q6ZTY9 151 aa1.51□□□□□ -2.17
SEMA3A-202ENST00000420047 SPCS1Q9Y6A9 102 aa1.51□□□□□ -2.17
SEMA3A-202ENST00000420047 A0A1B0GW54 56 aa1.5□□□□□ -2.17
SEMA3A-202ENST00000420047 H3BT86 120 aa1.5□□□□□ -2.17
SEMA3A-202ENST00000420047 S4R3F8 94 aa1.5□□□□□ -2.17
SEMA3A-202ENST00000420047 SYNE2Q8WXH0 6885 aaKnown RBP1.5□□□□□ -2.17
SEMA3A-202ENST00000420047 MACF1Q9UPN3 7388 aaKnown RBP1.5□□□□□ -2.17
SEMA3A-202ENST00000420047 SMIM6P0DI80 62 aa1.49□□□□□ -2.17
SEMA3A-202ENST00000420047 KRTAP19-8Q3LI54 63 aa1.49□□□□□ -2.17
SEMA3A-202ENST00000420047 Q5VV11 94 aa1.49□□□□□ -2.17
SEMA3A-202ENST00000420047 CSAG1Q6PB30 78 aa1.48□□□□□ -2.17
SEMA3A-202ENST00000420047 SPRR2GQ9BYE4 73 aa1.48□□□□□ -2.17
SEMA3A-202ENST00000420047 PCP4L1A6NKN8 68 aa1.47□□□□□ -2.17
SEMA3A-202ENST00000420047 KLKP1Q107X0 134 aa1.47□□□□□ -2.17
SEMA3A-202ENST00000420047 CYP4F30PQ9H0H9 118 aa1.47□□□□□ -2.17
SEMA3A-202ENST00000420047 KRTAP20-1Q3LI63 56 aa1.46□□□□□ -2.18
SEMA3A-202ENST00000420047 ETDBQ3ZM63 59 aa1.46□□□□□ -2.18
SEMA3A-202ENST00000420047 CAMK2N1Q7Z7J9 78 aa1.46□□□□□ -2.18
SEMA3A-202ENST00000420047 UBL5Q9BZL1 73 aa1.46□□□□□ -2.18
SEMA3A-202ENST00000420047 MUC12Q9UKN1 5478 aa1.45□□□□□ -2.18
SEMA3A-202ENST00000420047 IMUPQ9GZP8 106 aa1.45□□□□□ -2.18
SEMA3A-202ENST00000420047 KMT2DO14686 5537 aa1.44□□□□□ -2.18
SEMA3A-202ENST00000420047 MT1XP80297 61 aa1.44□□□□□ -2.18
SEMA3A-202ENST00000420047 COL5A1-AS1Q5SY13 56 aa1.44□□□□□ -2.18
SEMA3A-202ENST00000420047 ADM2Q7Z4H4 148 aa1.44□□□□□ -2.18
SEMA3A-202ENST00000420047 P0C880 135 aa1.43□□□□□ -2.18
SEMA3A-202ENST00000420047 SPRR2FQ96RM1 72 aa1.43□□□□□ -2.18
SEMA3A-202ENST00000420047 H0Y9P7 68 aa1.42□□□□□ -2.18
SEMA3A-202ENST00000420047 SPRR2EP22531 72 aa1.42□□□□□ -2.18
SEMA3A-202ENST00000420047 SPRR2BP35325 72 aa1.42□□□□□ -2.18
SEMA3A-202ENST00000420047 SPRR2AP35326 72 aa1.42□□□□□ -2.18
SEMA3A-202ENST00000420047 HIST1H4AP62805 103 aaKnown RBP1.42□□□□□ -2.18
SEMA3A-202ENST00000420047 F8W1H4 67 aa1.41□□□□□ -2.18
SEMA3A-202ENST00000420047 KRTAP2-3P0C7H8 128 aa1.41□□□□□ -2.18
SEMA3A-202ENST00000420047 LINC00208Q96KT6 92 aa1.41□□□□□ -2.18
SEMA3A-202ENST00000420047 KRTAP2-4Q9BYR9 128 aa1.41□□□□□ -2.18
SEMA3A-202ENST00000420047 TP53AIP1Q9HCN2 124 aa1.41□□□□□ -2.18
SEMA3A-202ENST00000420047 TRAV22A0A0B4J277 110 aa1.4□□□□□ -2.19
SEMA3A-202ENST00000420047 NDUFC1O43677 76 aa1.4□□□□□ -2.19
SEMA3A-202ENST00000420047 LINC01554Q52M75 96 aa1.4□□□□□ -2.19
SEMA3A-202ENST00000420047 GTF2H5Q6ZYL4 71 aa1.4□□□□□ -2.19
SEMA3A-202ENST00000420047 LOC101927531A0A1B0GV80 90 aa1.39□□□□□ -2.19
SEMA3A-202ENST00000420047 KRTAP8-1Q8IUC2 63 aa1.39□□□□□ -2.19
SEMA3A-202ENST00000420047 A0A1B0GV90 55 aa1.38□□□□□ -2.19
SEMA3A-202ENST00000420047 A8MUN3 132 aa1.38□□□□□ -2.19
SEMA3A-202ENST00000420047 UQCRQO14949 82 aa1.38□□□□□ -2.19
SEMA3A-202ENST00000420047 ACYP1P07311 99 aa1.38□□□□□ -2.19
SEMA3A-202ENST00000420047 PLAC4Q8WY50 150 aa1.38□□□□□ -2.19
SEMA3A-202ENST00000420047 M0QZ58 72 aa1.37□□□□□ -2.19
SEMA3A-202ENST00000420047 CRIPTQ9P021 101 aa1.37□□□□□ -2.19
SEMA3A-202ENST00000420047 NEBP20929 6669 aa1.37□□□□□ -2.19
SEMA3A-202ENST00000420047 H0YAA0 97 aa1.36□□□□□ -2.19
SEMA3A-202ENST00000420047 SPRR2DP22532 72 aa1.36□□□□□ -2.19
SEMA3A-202ENST00000420047 KRTAP2-1Q9BYU5 128 aa1.36□□□□□ -2.19
SEMA3A-202ENST00000420047 R4GN34 69 aa1.36□□□□□ -2.19
SEMA3A-202ENST00000420047 MDN1Q9NU22 5596 aa1.35□□□□□ -2.19
SEMA3A-202ENST00000420047 KRTAP12-3P60328 96 aa1.35□□□□□ -2.19
SEMA3A-202ENST00000420047 LINC00643Q86TS7 51 aa1.35□□□□□ -2.19
SEMA3A-202ENST00000420047 FAM240AA0A1B0GVK7 77 aa1.33□□□□□ -2.2
SEMA3A-202ENST00000420047 ATOX1O00244 68 aa1.33□□□□□ -2.2
SEMA3A-202ENST00000420047 MP68P56378 58 aa1.33□□□□□ -2.2
SEMA3A-202ENST00000420047 KRTAP13-4Q3LI77 160 aa1.33□□□□□ -2.2
SEMA3A-202ENST00000420047 PRO2289Q9P1D8 64 aa1.33□□□□□ -2.2
SEMA3A-202ENST00000420047 ATP5EP2Q5VTU8 51 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms