RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 CRIPTQ9P021 101 aa7.97□□□□□ -1.13
SEMA3B-203ENST00000419007 K7ERS5 55 aa7.95□□□□□ -1.14
SEMA3B-203ENST00000419007 PKHD1L1Q86WI1 4243 aa7.92□□□□□ -1.14
SEMA3B-203ENST00000419007 KRTAP25-1Q3LHN0 102 aa7.91□□□□□ -1.14
SEMA3B-203ENST00000419007 Q5VSD8 79 aa7.91□□□□□ -1.14
SEMA3B-203ENST00000419007 HSPG2P98160 4391 aa7.91□□□□□ -1.14
SEMA3B-203ENST00000419007 RYR1P21817 5038 aa7.89□□□□□ -1.15
SEMA3B-203ENST00000419007 A0A0D9SG42 100 aa7.88□□□□□ -1.15
SEMA3B-203ENST00000419007 KRTAP17-1Q9BYP8 105 aa7.88□□□□□ -1.15
SEMA3B-203ENST00000419007 LRP1Q07954 4544 aaKnown RBP7.87□□□□□ -1.15
SEMA3B-203ENST00000419007 MYCBP2O75592 4640 aa7.84□□□□□ -1.15
SEMA3B-203ENST00000419007 ROMO1P60602 79 aa7.8□□□□□ -1.16
SEMA3B-203ENST00000419007 KRTAP3-3Q9BYR6 98 aa7.78□□□□□ -1.16
SEMA3B-203ENST00000419007 KRTAP10-6P60371 365 aaPredicted RBP7.78□□□□□ -1.16
SEMA3B-203ENST00000419007 KRTAP10-8P60410 259 aa7.78□□□□□ -1.16
SEMA3B-203ENST00000419007 RPL37P61927 97 aaKnown RBP7.77□□□□□ -1.17
SEMA3B-203ENST00000419007 KRTAP13-4Q3LI77 160 aa7.77□□□□□ -1.17
SEMA3B-203ENST00000419007 S4R3F8 94 aa7.76□□□□□ -1.17
SEMA3B-203ENST00000419007 FAT3Q8TDW7 4589 aa7.76□□□□□ -1.17
SEMA3B-203ENST00000419007 KRTAP4-5Q9BYR2 181 aa7.75□□□□□ -1.17
SEMA3B-203ENST00000419007 XP32Q5T750 250 aa7.74□□□□□ -1.17
SEMA3B-203ENST00000419007 P0C880 135 aa7.7□□□□□ -1.18
SEMA3B-203ENST00000419007 KRTAP3-2Q9BYR7 98 aa7.7□□□□□ -1.18
SEMA3B-203ENST00000419007 TNXBP22105 4242 aa7.68□□□□□ -1.18
SEMA3B-203ENST00000419007 BIRC6Q9NR09 4857 aa7.63□□□□□ -1.19
SEMA3B-203ENST00000419007 ABCA13Q86UQ4 5058 aa7.62□□□□□ -1.19
SEMA3B-203ENST00000419007 HERC2O95714 4834 aa7.6□□□□□ -1.19
SEMA3B-203ENST00000419007 SPINT4Q6UDR6 99 aa7.6□□□□□ -1.19
SEMA3B-203ENST00000419007 C10orf95Q9H7T3 257 aa7.59□□□□□ -1.19
SEMA3B-203ENST00000419007 TPRXLQ17RH7 258 aa7.56□□□□□ -1.2
SEMA3B-203ENST00000419007 NDUFAF8A1L188 74 aa7.55□□□□□ -1.2
SEMA3B-203ENST00000419007 J3QL48 77 aa7.55□□□□□ -1.2
SEMA3B-203ENST00000419007 KRTAP12-2P59991 146 aa7.54□□□□□ -1.2
SEMA3B-203ENST00000419007 LPAP08519 4548 aa7.51□□□□□ -1.21
SEMA3B-203ENST00000419007 MT1HL1P0DM35 61 aa7.5□□□□□ -1.21
SEMA3B-203ENST00000419007 LUZP6Q538Z0 58 aa7.48□□□□□ -1.21
SEMA3B-203ENST00000419007 LRP2P98164 4655 aa7.47□□□□□ -1.21
SEMA3B-203ENST00000419007 PCLOQ9Y6V0 5065 aa7.45□□□□□ -1.22
SEMA3B-203ENST00000419007 KRTAP12-1P59990 96 aa7.44□□□□□ -1.22
SEMA3B-203ENST00000419007 SEC61BP60468 96 aaKnown RBP7.39□□□□□ -1.23
SEMA3B-203ENST00000419007 HERC1Q15751 4861 aa7.36□□□□□ -1.23
SEMA3B-203ENST00000419007 M0QZ58 72 aa7.35□□□□□ -1.23
SEMA3B-203ENST00000419007 R4GN34 69 aa7.28□□□□□ -1.24
SEMA3B-203ENST00000419007 KRTAP15-1Q3LI76 137 aa7.2□□□□□ -1.26
SEMA3B-203ENST00000419007 LORP23490 312 aaPredicted RBP7.13□□□□□ -1.27
SEMA3B-203ENST00000419007 MUC2Q02817 5179 aa7.08□□□□□ -1.28
SEMA3B-203ENST00000419007 KRTAP4-1Q9BYQ7 146 aa7.03□□□□□ -1.28
SEMA3B-203ENST00000419007 HMCN2Q8NDA2 5059 aa7.02□□□□□ -1.29
SEMA3B-203ENST00000419007 CAMK2N1Q7Z7J9 78 aa6.97□□□□□ -1.29
SEMA3B-203ENST00000419007 MUC17Q685J3 4493 aa6.97□□□□□ -1.29
SEMA3B-203ENST00000419007 RNF213Q63HN8 5207 aa6.96□□□□□ -1.3
SEMA3B-203ENST00000419007 UBR4Q5T4S7 5183 aa6.96□□□□□ -1.3
SEMA3B-203ENST00000419007 PLAC4Q8WY50 150 aa6.92□□□□□ -1.3
SEMA3B-203ENST00000419007 KRTAP19-2Q3LHN2 52 aa6.8□□□□□ -1.32
SEMA3B-203ENST00000419007 FAT4Q6V0I7 4981 aa6.76□□□□□ -1.33
SEMA3B-203ENST00000419007 PP632Q6XCG6 107 aa6.74□□□□□ -1.33
SEMA3B-203ENST00000419007 FLGP20930 4061 aaPredicted RBP6.66□□□□□ -1.34
SEMA3B-203ENST00000419007 TNP1P09430 55 aa6.63□□□□□ -1.35
SEMA3B-203ENST00000419007 M0R2T5 61 aa6.5□□□□□ -1.37
SEMA3B-203ENST00000419007 LCE2CQ5TA81 110 aa6.42□□□□□ -1.38
SEMA3B-203ENST00000419007 KRTAP23-1A1A580 65 aa6.37□□□□□ -1.39
SEMA3B-203ENST00000419007 KRTAP19-1Q8IUB9 90 aa6.35□□□□□ -1.39
SEMA3B-203ENST00000419007 SPRR2GQ9BYE4 73 aa6.35□□□□□ -1.39
SEMA3B-203ENST00000419007 MT1HP80294 61 aa6.34□□□□□ -1.39
SEMA3B-203ENST00000419007 KRTAP10-10P60014 251 aa6.3□□□□□ -1.4
SEMA3B-203ENST00000419007 LCE3AQ5TA76 89 aa6.27□□□□□ -1.41
SEMA3B-203ENST00000419007 SPRR5A0A1B0GTR4 108 aa6.26□□□□□ -1.41
SEMA3B-203ENST00000419007 MT1FP04733 61 aa6.21□□□□□ -1.41
SEMA3B-203ENST00000419007 MT2AP02795 61 aa6.19□□□□□ -1.42
SEMA3B-203ENST00000419007 PRO2289Q9P1D8 64 aa6.17□□□□□ -1.42
SEMA3B-203ENST00000419007 KRTAP9-8Q9BYQ0 159 aa6.09□□□□□ -1.43
SEMA3B-203ENST00000419007 LCE2AQ5TA79 106 aaPredicted RBP6.05□□□□□ -1.44
SEMA3B-203ENST00000419007 FSIP2Q5CZC0 6907 aa6.03□□□□□ -1.44
SEMA3B-203ENST00000419007 KRTAP8-1Q8IUC2 63 aa6.01□□□□□ -1.45
SEMA3B-203ENST00000419007 KRTAP19-8Q3LI54 63 aa6.01□□□□□ -1.45
SEMA3B-203ENST00000419007 KRTAP10-5P60370 271 aa6□□□□□ -1.45
SEMA3B-203ENST00000419007 MT1BP07438 61 aa6□□□□□ -1.45
SEMA3B-203ENST00000419007 MT1XP80297 61 aa5.99□□□□□ -1.45
SEMA3B-203ENST00000419007 KRTAP10-12P60413 245 aa5.97□□□□□ -1.45
SEMA3B-203ENST00000419007 USH2AO75445 5202 aa5.96□□□□□ -1.46
SEMA3B-203ENST00000419007 KRTAP12-3P60328 96 aa5.96□□□□□ -1.46
SEMA3B-203ENST00000419007 KRTAP10-7P60409 375 aaPredicted RBP5.89□□□□□ -1.47
SEMA3B-203ENST00000419007 KRTAP9-3Q9BYQ3 159 aa5.84□□□□□ -1.48
SEMA3B-203ENST00000419007 LCE2BO14633 110 aa5.76□□□□□ -1.49
SEMA3B-203ENST00000419007 INE1O15225 51 aa5.71□□□□□ -1.5
SEMA3B-203ENST00000419007 KMT2DO14686 5537 aa5.68□□□□□ -1.5
SEMA3B-203ENST00000419007 KRTAP19-5Q3LI72 72 aa5.67□□□□□ -1.5
SEMA3B-203ENST00000419007 SSPOA2VEC9 5147 aa5.59□□□□□ -1.52
SEMA3B-203ENST00000419007 LCE3CQ5T5A8 94 aa5.58□□□□□ -1.52
SEMA3B-203ENST00000419007 KRTAP4-8A0A0G2JLE6 195 aa5.56□□□□□ -1.52
SEMA3B-203ENST00000419007 KRTAP4-8Q9BYQ9 185 aa5.56□□□□□ -1.52
SEMA3B-203ENST00000419007 KRTAP9-2Q9BYQ4 174 aa5.44□□□□□ -1.54
SEMA3B-203ENST00000419007 KRTAP9-6A8MVA2 160 aa5.41□□□□□ -1.54
SEMA3B-203ENST00000419007 LCE2DQ5TA82 110 aaPredicted RBP5.41□□□□□ -1.54
SEMA3B-203ENST00000419007 KRTAP4-7Q9BYR0 210 aa5.4□□□□□ -1.55
SEMA3B-203ENST00000419007 FCGBPQ9Y6R7 5405 aaPredicted RBP5.36□□□□□ -1.55
SEMA3B-203ENST00000419007 KRTAP19-7Q3SYF9 63 aa5.33□□□□□ -1.56
SEMA3B-203ENST00000419007 KRTAP19-6Q3LI70 58 aa5.28□□□□□ -1.56
SEMA3B-203ENST00000419007 CRCT1Q9UGL9 99 aa5.22□□□□□ -1.57
SEMA3B-203ENST00000419007 MACF1Q9UPN3 7388 aaKnown RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms