RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-208ENST00000418212 DNAH17Q9UFH2 4485 aa6.66□□□□□ -1.34
BDNF-208ENST00000418212 KRTAP10-10P60014 251 aa6.65□□□□□ -1.35
BDNF-208ENST00000418212 DNHD1Q96M86 4753 aa6.64□□□□□ -1.35
BDNF-208ENST00000418212 KRTAP3-1Q9BYR8 98 aa6.56□□□□□ -1.36
BDNF-208ENST00000418212 DYNC2H1Q8NCM8 4307 aaKnown RBP6.55□□□□□ -1.36
BDNF-208ENST00000418212 FAT2Q9NYQ8 4349 aa6.54□□□□□ -1.36
BDNF-208ENST00000418212 DNAH11Q96DT5 4516 aa6.53□□□□□ -1.36
BDNF-208ENST00000418212 ALMS1Q8TCU4 4167 aa6.51□□□□□ -1.37
BDNF-208ENST00000418212 HYDINQ4G0P3 5121 aa6.5□□□□□ -1.37
BDNF-208ENST00000418212 LRP1BQ9NZR2 4599 aa6.47□□□□□ -1.37
BDNF-208ENST00000418212 DNAH5Q8TE73 4624 aa6.43□□□□□ -1.38
BDNF-208ENST00000418212 MT1HL1P0DM35 61 aa6.42□□□□□ -1.38
BDNF-208ENST00000418212 KRTAP12-2P59991 146 aa6.42□□□□□ -1.38
BDNF-208ENST00000418212 KRTAP15-1Q3LI76 137 aa6.41□□□□□ -1.38
BDNF-208ENST00000418212 PKHD1P08F94 4074 aa6.41□□□□□ -1.38
BDNF-208ENST00000418212 KRTAP4-5Q9BYR2 181 aa6.4□□□□□ -1.39
BDNF-208ENST00000418212 PP632Q6XCG6 107 aa6.4□□□□□ -1.39
BDNF-208ENST00000418212 KRTAP13-4Q3LI77 160 aa6.38□□□□□ -1.39
BDNF-208ENST00000418212 VPS13BQ7Z7G8 4022 aa6.37□□□□□ -1.39
BDNF-208ENST00000418212 KRTAP10-4P60372 401 aaPredicted RBP6.33□□□□□ -1.4
BDNF-208ENST00000418212 PKD1P98161 4303 aa6.32□□□□□ -1.4
BDNF-208ENST00000418212 KRTAP12-1P59990 96 aa6.32□□□□□ -1.4
BDNF-208ENST00000418212 KRTAP10-6P60371 365 aaPredicted RBP6.3□□□□□ -1.4
BDNF-208ENST00000418212 PRO2289Q9P1D8 64 aa6.26□□□□□ -1.41
BDNF-208ENST00000418212 FAT1Q14517 4588 aa6.22□□□□□ -1.41
BDNF-208ENST00000418212 KRTAP3-3Q9BYR6 98 aa6.14□□□□□ -1.43
BDNF-208ENST00000418212 KRTAP3-2Q9BYR7 98 aa6.13□□□□□ -1.43
BDNF-208ENST00000418212 RYR1P21817 5038 aa6.09□□□□□ -1.43
BDNF-208ENST00000418212 SACSQ9NZJ4 4579 aa6.07□□□□□ -1.44
BDNF-208ENST00000418212 MYCBP2O75592 4640 aa6.06□□□□□ -1.44
BDNF-208ENST00000418212 KMT2CQ8NEZ4 4911 aaKnown RBP6.06□□□□□ -1.44
BDNF-208ENST00000418212 LRP1Q07954 4544 aaKnown RBP6.03□□□□□ -1.44
BDNF-208ENST00000418212 KIAA1109Q2LD37 5005 aa6.03□□□□□ -1.44
BDNF-208ENST00000418212 DYNC1H1Q14204 4646 aaKnown RBP6.01□□□□□ -1.45
BDNF-208ENST00000418212 APOBP04114 4563 aaKnown RBP5.96□□□□□ -1.46
BDNF-208ENST00000418212 HSPG2P98160 4391 aa5.95□□□□□ -1.46
BDNF-208ENST00000418212 PKHD1L1Q86WI1 4243 aa5.93□□□□□ -1.46
BDNF-208ENST00000418212 LPAP08519 4548 aa5.91□□□□□ -1.46
BDNF-208ENST00000418212 LORP23490 312 aaPredicted RBP5.9□□□□□ -1.46
BDNF-208ENST00000418212 FAT3Q8TDW7 4589 aa5.88□□□□□ -1.47
BDNF-208ENST00000418212 RYR3Q15413 4870 aa5.81□□□□□ -1.48
BDNF-208ENST00000418212 KRTAP4-1Q9BYQ7 146 aa5.79□□□□□ -1.48
BDNF-208ENST00000418212 RYR2Q92736 4967 aa5.77□□□□□ -1.49
BDNF-208ENST00000418212 TNXBP22105 4242 aa5.73□□□□□ -1.49
BDNF-208ENST00000418212 INE1O15225 51 aa5.72□□□□□ -1.49
BDNF-208ENST00000418212 KRTAP10-12P60413 245 aa5.7□□□□□ -1.5
BDNF-208ENST00000418212 LRP2P98164 4655 aa5.7□□□□□ -1.5
BDNF-208ENST00000418212 ABCA13Q86UQ4 5058 aa5.67□□□□□ -1.5
BDNF-208ENST00000418212 KRTAP17-1Q9BYP8 105 aa5.66□□□□□ -1.5
BDNF-208ENST00000418212 CRCT1Q9UGL9 99 aa5.6□□□□□ -1.51
BDNF-208ENST00000418212 EPPK1P58107 5090 aaKnown RBP5.59□□□□□ -1.51
BDNF-208ENST00000418212 MUC2Q02817 5179 aa5.58□□□□□ -1.52
BDNF-208ENST00000418212 KRTAP12-3P60328 96 aa5.57□□□□□ -1.52
BDNF-208ENST00000418212 LCE3AQ5TA76 89 aa5.57□□□□□ -1.52
BDNF-208ENST00000418212 HERC2O95714 4834 aa5.55□□□□□ -1.52
BDNF-208ENST00000418212 MT1HP80294 61 aa5.5□□□□□ -1.53
BDNF-208ENST00000418212 MT2AP02795 61 aa5.45□□□□□ -1.54
BDNF-208ENST00000418212 PCLOQ9Y6V0 5065 aa5.43□□□□□ -1.54
BDNF-208ENST00000418212 MT1FP04733 61 aa5.38□□□□□ -1.55
BDNF-208ENST00000418212 KRTAP23-1A1A580 65 aa5.33□□□□□ -1.56
BDNF-208ENST00000418212 SPRR2GQ9BYE4 73 aa5.32□□□□□ -1.56
BDNF-208ENST00000418212 KRTAP8-1Q8IUC2 63 aa5.29□□□□□ -1.56
BDNF-208ENST00000418212 FAT4Q6V0I7 4981 aa5.23□□□□□ -1.57
BDNF-208ENST00000418212 MUC17Q685J3 4493 aa5.21□□□□□ -1.58
BDNF-208ENST00000418212 HERC1Q15751 4861 aa5.19□□□□□ -1.58
BDNF-208ENST00000418212 FSIP2Q5CZC0 6907 aa5.17□□□□□ -1.58
BDNF-208ENST00000418212 KRTAP19-1Q8IUB9 90 aa5.16□□□□□ -1.58
BDNF-208ENST00000418212 BIRC6Q9NR09 4857 aa5.15□□□□□ -1.59
BDNF-208ENST00000418212 SYNE1Q8NF91 8797 aaKnown RBP5.14□□□□□ -1.59
BDNF-208ENST00000418212 RNF213Q63HN8 5207 aa5.12□□□□□ -1.59
BDNF-208ENST00000418212 SPRR5A0A1B0GTR4 108 aa5.1□□□□□ -1.59
BDNF-208ENST00000418212 KRTAP10-5P60370 271 aa5.08□□□□□ -1.6
BDNF-208ENST00000418212 KRTAP19-5Q3LI72 72 aa5.06□□□□□ -1.6
BDNF-208ENST00000418212 UBR4Q5T4S7 5183 aa5.03□□□□□ -1.6
BDNF-208ENST00000418212 SPRR2FQ96RM1 72 aa5.02□□□□□ -1.61
BDNF-208ENST00000418212 KRTAP10-7P60409 375 aaPredicted RBP5.01□□□□□ -1.61
BDNF-208ENST00000418212 LCE2CQ5TA81 110 aa4.99□□□□□ -1.61
BDNF-208ENST00000418212 KRTAP9-8Q9BYQ0 159 aa4.98□□□□□ -1.61
BDNF-208ENST00000418212 KRTAP19-8Q3LI54 63 aa4.96□□□□□ -1.61
BDNF-208ENST00000418212 HMCN2Q8NDA2 5059 aa4.93□□□□□ -1.62
BDNF-208ENST00000418212 MT1BP07438 61 aa4.93□□□□□ -1.62
BDNF-208ENST00000418212 FLGP20930 4061 aaPredicted RBP4.91□□□□□ -1.62
BDNF-208ENST00000418212 OBSCNQ5VST9 7968 aa4.91□□□□□ -1.62
BDNF-208ENST00000418212 MT1XP80297 61 aa4.91□□□□□ -1.62
BDNF-208ENST00000418212 KRTAP19-2Q3LHN2 52 aa4.89□□□□□ -1.63
BDNF-208ENST00000418212 KRTAP4-8A0A0G2JLE6 195 aa4.87□□□□□ -1.63
BDNF-208ENST00000418212 KRTAP4-8Q9BYQ9 185 aa4.87□□□□□ -1.63
BDNF-208ENST00000418212 LCE3CQ5T5A8 94 aa4.86□□□□□ -1.63
BDNF-208ENST00000418212 KRTAP9-3Q9BYQ3 159 aa4.82□□□□□ -1.64
BDNF-208ENST00000418212 LCE2BO14633 110 aa4.7□□□□□ -1.66
BDNF-208ENST00000418212 USH2AO75445 5202 aa4.66□□□□□ -1.66
BDNF-208ENST00000418212 MT1GP13640 62 aa4.62□□□□□ -1.67
BDNF-208ENST00000418212 SPRR2EP22531 72 aa4.6□□□□□ -1.67
BDNF-208ENST00000418212 SPRR2BP35325 72 aa4.6□□□□□ -1.67
BDNF-208ENST00000418212 SPRR2AP35326 72 aa4.6□□□□□ -1.67
BDNF-208ENST00000418212 KMT2DO14686 5537 aa4.58□□□□□ -1.68
BDNF-208ENST00000418212 KRTAP4-7Q9BYR0 210 aa4.57□□□□□ -1.68
BDNF-208ENST00000418212 LCE3BQ5TA77 95 aa4.56□□□□□ -1.68
BDNF-208ENST00000418212 KRTAP19-4Q3LI73 84 aa4.51□□□□□ -1.69
BDNF-208ENST00000418212 DSTQ03001 7570 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms