RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 S4R3F8 94 aa6.06□□□□□ -1.44
CSPG4P3Y-201ENST00000418188 RYR3Q15413 4870 aa6.04□□□□□ -1.44
CSPG4P3Y-201ENST00000418188 LRP1Q07954 4544 aaKnown RBP6.03□□□□□ -1.44
CSPG4P3Y-201ENST00000418188 A0A0D9SG42 100 aa6.01□□□□□ -1.45
CSPG4P3Y-201ENST00000418188 FAT3Q8TDW7 4589 aa6□□□□□ -1.45
CSPG4P3Y-201ENST00000418188 KRTAP25-1Q3LHN0 102 aa5.95□□□□□ -1.46
CSPG4P3Y-201ENST00000418188 MYCBP2O75592 4640 aa5.95□□□□□ -1.46
CSPG4P3Y-201ENST00000418188 KRTAP3-3Q9BYR6 98 aa5.95□□□□□ -1.46
CSPG4P3Y-201ENST00000418188 KRTAP10-6P60371 365 aaPredicted RBP5.93□□□□□ -1.46
CSPG4P3Y-201ENST00000418188 TNXBP22105 4242 aa5.92□□□□□ -1.46
CSPG4P3Y-201ENST00000418188 CRIPTQ9P021 101 aa5.92□□□□□ -1.46
CSPG4P3Y-201ENST00000418188 ROMO1P60602 79 aa5.91□□□□□ -1.46
CSPG4P3Y-201ENST00000418188 HSPG2P98160 4391 aa5.9□□□□□ -1.46
CSPG4P3Y-201ENST00000418188 MT1HL1P0DM35 61 aa5.89□□□□□ -1.47
CSPG4P3Y-201ENST00000418188 P0C880 135 aa5.88□□□□□ -1.47
CSPG4P3Y-201ENST00000418188 RYR1P21817 5038 aa5.88□□□□□ -1.47
CSPG4P3Y-201ENST00000418188 KRTAP13-4Q3LI77 160 aa5.86□□□□□ -1.47
CSPG4P3Y-201ENST00000418188 KRTAP3-2Q9BYR7 98 aa5.86□□□□□ -1.47
CSPG4P3Y-201ENST00000418188 TPRXLQ17RH7 258 aa5.85□□□□□ -1.47
CSPG4P3Y-201ENST00000418188 H3BS24 57 aa5.85□□□□□ -1.47
CSPG4P3Y-201ENST00000418188 KIAA1109Q2LD37 5005 aa5.84□□□□□ -1.47
CSPG4P3Y-201ENST00000418188 SPINT4Q6UDR6 99 aa5.83□□□□□ -1.48
CSPG4P3Y-201ENST00000418188 EPPK1P58107 5090 aaKnown RBP5.83□□□□□ -1.48
CSPG4P3Y-201ENST00000418188 KRTAP17-1Q9BYP8 105 aa5.8□□□□□ -1.48
CSPG4P3Y-201ENST00000418188 M0QZ58 72 aa5.76□□□□□ -1.49
CSPG4P3Y-201ENST00000418188 SEC61BP60468 96 aaKnown RBP5.73□□□□□ -1.49
CSPG4P3Y-201ENST00000418188 KRTAP12-2P59991 146 aa5.72□□□□□ -1.49
CSPG4P3Y-201ENST00000418188 J3QL48 77 aa5.71□□□□□ -1.5
CSPG4P3Y-201ENST00000418188 LRP2P98164 4655 aa5.71□□□□□ -1.5
CSPG4P3Y-201ENST00000418188 R4GN34 69 aa5.69□□□□□ -1.5
CSPG4P3Y-201ENST00000418188 KRTAP12-1P59990 96 aa5.68□□□□□ -1.5
CSPG4P3Y-201ENST00000418188 C10orf95Q9H7T3 257 aa5.66□□□□□ -1.5
CSPG4P3Y-201ENST00000418188 LPAP08519 4548 aa5.64□□□□□ -1.51
CSPG4P3Y-201ENST00000418188 BIRC6Q9NR09 4857 aa5.62□□□□□ -1.51
CSPG4P3Y-201ENST00000418188 KRTAP4-5Q9BYR2 181 aa5.62□□□□□ -1.51
CSPG4P3Y-201ENST00000418188 ABCA13Q86UQ4 5058 aa5.55□□□□□ -1.52
CSPG4P3Y-201ENST00000418188 HERC2O95714 4834 aa5.51□□□□□ -1.53
CSPG4P3Y-201ENST00000418188 CAMK2N1Q7Z7J9 78 aa5.45□□□□□ -1.54
CSPG4P3Y-201ENST00000418188 KRTAP4-1Q9BYQ7 146 aa5.44□□□□□ -1.54
CSPG4P3Y-201ENST00000418188 LORP23490 312 aaPredicted RBP5.42□□□□□ -1.54
CSPG4P3Y-201ENST00000418188 PCLOQ9Y6V0 5065 aa5.39□□□□□ -1.55
CSPG4P3Y-201ENST00000418188 A0A0A0MQY5 61 aa5.37□□□□□ -1.55
CSPG4P3Y-201ENST00000418188 MUC17Q685J3 4493 aa5.36□□□□□ -1.55
CSPG4P3Y-201ENST00000418188 NDUFAF8A1L188 74 aa5.34□□□□□ -1.55
CSPG4P3Y-201ENST00000418188 KRTAP15-1Q3LI76 137 aa5.34□□□□□ -1.55
CSPG4P3Y-201ENST00000418188 KRTAP19-2Q3LHN2 52 aa5.26□□□□□ -1.57
CSPG4P3Y-201ENST00000418188 PP632Q6XCG6 107 aa5.26□□□□□ -1.57
CSPG4P3Y-201ENST00000418188 PLAC4Q8WY50 150 aa5.25□□□□□ -1.57
CSPG4P3Y-201ENST00000418188 MUC2Q02817 5179 aa5.24□□□□□ -1.57
CSPG4P3Y-201ENST00000418188 HERC1Q15751 4861 aa5.23□□□□□ -1.57
CSPG4P3Y-201ENST00000418188 M0R2T5 61 aa5.21□□□□□ -1.58
CSPG4P3Y-201ENST00000418188 TNP1P09430 55 aa5.19□□□□□ -1.58
CSPG4P3Y-201ENST00000418188 FLGP20930 4061 aaPredicted RBP5.17□□□□□ -1.58
CSPG4P3Y-201ENST00000418188 LUZP6Q538Z0 58 aa5.14□□□□□ -1.59
CSPG4P3Y-201ENST00000418188 HMCN2Q8NDA2 5059 aa5.07□□□□□ -1.6
CSPG4P3Y-201ENST00000418188 KRTAP10-10P60014 251 aa5□□□□□ -1.61
CSPG4P3Y-201ENST00000418188 LCE2CQ5TA81 110 aa4.99□□□□□ -1.61
CSPG4P3Y-201ENST00000418188 FAT4Q6V0I7 4981 aa4.99□□□□□ -1.61
CSPG4P3Y-201ENST00000418188 KRTAP23-1A1A580 65 aa4.99□□□□□ -1.61
CSPG4P3Y-201ENST00000418188 SPRR2GQ9BYE4 73 aa4.98□□□□□ -1.61
CSPG4P3Y-201ENST00000418188 UBR4Q5T4S7 5183 aa4.94□□□□□ -1.62
CSPG4P3Y-201ENST00000418188 MT1HP80294 61 aa4.93□□□□□ -1.62
CSPG4P3Y-201ENST00000418188 KRTAP19-1Q8IUB9 90 aa4.93□□□□□ -1.62
CSPG4P3Y-201ENST00000418188 RNF213Q63HN8 5207 aa4.9□□□□□ -1.63
CSPG4P3Y-201ENST00000418188 MT2AP02795 61 aa4.86□□□□□ -1.63
CSPG4P3Y-201ENST00000418188 MT1FP04733 61 aa4.86□□□□□ -1.63
CSPG4P3Y-201ENST00000418188 LCE3AQ5TA76 89 aa4.8□□□□□ -1.64
CSPG4P3Y-201ENST00000418188 KRTAP9-8Q9BYQ0 159 aa4.79□□□□□ -1.64
CSPG4P3Y-201ENST00000418188 KRTAP19-8Q3LI54 63 aa4.74□□□□□ -1.65
CSPG4P3Y-201ENST00000418188 SPRR5A0A1B0GTR4 108 aa4.72□□□□□ -1.65
CSPG4P3Y-201ENST00000418188 MT1BP07438 61 aa4.67□□□□□ -1.66
CSPG4P3Y-201ENST00000418188 KRTAP10-12P60413 245 aa4.67□□□□□ -1.66
CSPG4P3Y-201ENST00000418188 PRO2289Q9P1D8 64 aa4.67□□□□□ -1.66
CSPG4P3Y-201ENST00000418188 KRTAP8-1Q8IUC2 63 aa4.66□□□□□ -1.66
CSPG4P3Y-201ENST00000418188 KRTAP10-5P60370 271 aa4.65□□□□□ -1.67
CSPG4P3Y-201ENST00000418188 MT1XP80297 61 aa4.64□□□□□ -1.67
CSPG4P3Y-201ENST00000418188 KRTAP12-3P60328 96 aa4.62□□□□□ -1.67
CSPG4P3Y-201ENST00000418188 KRTAP9-3Q9BYQ3 159 aa4.59□□□□□ -1.68
CSPG4P3Y-201ENST00000418188 KRTAP10-7P60409 375 aaPredicted RBP4.54□□□□□ -1.68
CSPG4P3Y-201ENST00000418188 LCE2AQ5TA79 106 aaPredicted RBP4.44□□□□□ -1.7
CSPG4P3Y-201ENST00000418188 LCE2BO14633 110 aa4.4□□□□□ -1.7
CSPG4P3Y-201ENST00000418188 KRTAP19-5Q3LI72 72 aa4.38□□□□□ -1.71
CSPG4P3Y-201ENST00000418188 USH2AO75445 5202 aa4.35□□□□□ -1.71
CSPG4P3Y-201ENST00000418188 LCE3CQ5T5A8 94 aa4.31□□□□□ -1.72
CSPG4P3Y-201ENST00000418188 INE1O15225 51 aa4.3□□□□□ -1.72
CSPG4P3Y-201ENST00000418188 KRTAP4-8A0A0G2JLE6 195 aa4.26□□□□□ -1.73
CSPG4P3Y-201ENST00000418188 KRTAP4-8Q9BYQ9 185 aa4.26□□□□□ -1.73
CSPG4P3Y-201ENST00000418188 KMT2DO14686 5537 aa4.26□□□□□ -1.73
CSPG4P3Y-201ENST00000418188 FSIP2Q5CZC0 6907 aa4.13□□□□□ -1.75
CSPG4P3Y-201ENST00000418188 KRTAP19-7Q3SYF9 63 aa4.12□□□□□ -1.75
CSPG4P3Y-201ENST00000418188 KRTAP19-4Q3LI73 84 aa4.1□□□□□ -1.75
CSPG4P3Y-201ENST00000418188 KRTAP4-7Q9BYR0 210 aa4.07□□□□□ -1.76
CSPG4P3Y-201ENST00000418188 LCE2DQ5TA82 110 aaPredicted RBP4.06□□□□□ -1.76
CSPG4P3Y-201ENST00000418188 KRTAP9-6A8MVA2 160 aa4.05□□□□□ -1.76
CSPG4P3Y-201ENST00000418188 KRTAP9-2Q9BYQ4 174 aa4.05□□□□□ -1.76
CSPG4P3Y-201ENST00000418188 MT1EP04732 61 aa4.04□□□□□ -1.76
CSPG4P3Y-201ENST00000418188 MT1LQ93083 61 aa4.04□□□□□ -1.76
CSPG4P3Y-201ENST00000418188 SSPOA2VEC9 5147 aa3.98□□□□□ -1.77
CSPG4P3Y-201ENST00000418188 KRTAP19-6Q3LI70 58 aa3.96□□□□□ -1.77
CSPG4P3Y-201ENST00000418188 KRTAP2-3P0C7H8 128 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms