RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 KRTAP19-8Q3LI54 63 aa11.18□□□□□ -0.62
HLA-C-204ENST00000415537 UQCRQO14949 82 aa11.16□□□□□ -0.62
HLA-C-204ENST00000415537 A0A087WVE0 104 aa11.14□□□□□ -0.63
HLA-C-204ENST00000415537 ATOX1O00244 68 aa11.13□□□□□ -0.63
HLA-C-204ENST00000415537 H0Y9P7 68 aa11.12□□□□□ -0.63
HLA-C-204ENST00000415537 IMUPQ9GZP8 106 aa11.07□□□□□ -0.64
HLA-C-204ENST00000415537 CRIPTQ9P021 101 aa11.07□□□□□ -0.64
HLA-C-204ENST00000415537 NDUFC1O43677 76 aa11.04□□□□□ -0.64
HLA-C-204ENST00000415537 LINC00643Q86TS7 51 aa11.01□□□□□ -0.65
HLA-C-204ENST00000415537 KRTAP10-5P60370 271 aa10.99□□□□□ -0.65
HLA-C-204ENST00000415537 A8MUN3 132 aa10.95□□□□□ -0.66
HLA-C-204ENST00000415537 LINC00208Q96KT6 92 aa10.94□□□□□ -0.66
HLA-C-204ENST00000415537 H0YAA0 97 aa10.93□□□□□ -0.66
HLA-C-204ENST00000415537 MP68P56378 58 aa10.89□□□□□ -0.67
HLA-C-204ENST00000415537 ADM2Q7Z4H4 148 aa10.84□□□□□ -0.67
HLA-C-204ENST00000415537 OCR1Q9BZK8 76 aa10.83□□□□□ -0.68
HLA-C-204ENST00000415537 A0A1B0GV90 55 aa10.77□□□□□ -0.69
HLA-C-204ENST00000415537 MUC12Q9UKN1 5478 aa10.7□□□□□ -0.7
HLA-C-204ENST00000415537 H3BPC8 53 aa10.69□□□□□ -0.7
HLA-C-204ENST00000415537 J3QR89 54 aa10.68□□□□□ -0.7
HLA-C-204ENST00000415537 NEBP20929 6669 aa10.68□□□□□ -0.7
HLA-C-204ENST00000415537 SCGB1A1P11684 91 aa10.64□□□□□ -0.71
HLA-C-204ENST00000415537 KRTAP5-9P26371 169 aa10.62□□□□□ -0.71
HLA-C-204ENST00000415537 PRO2289Q9P1D8 64 aa10.61□□□□□ -0.71
HLA-C-204ENST00000415537 C20orf197Q8N268 126 aa10.6□□□□□ -0.71
HLA-C-204ENST00000415537 PLAC4Q8WY50 150 aa10.6□□□□□ -0.71
HLA-C-204ENST00000415537 R4GN34 69 aa10.6□□□□□ -0.71
HLA-C-204ENST00000415537 DMAC1Q96GE9 116 aa10.58□□□□□ -0.72
HLA-C-204ENST00000415537 P0C880 135 aa10.53□□□□□ -0.72
HLA-C-204ENST00000415537 M0QZ58 72 aa10.49□□□□□ -0.73
HLA-C-204ENST00000415537 MT1XP80297 61 aa10.48□□□□□ -0.73
HLA-C-204ENST00000415537 KMT2DO14686 5537 aa10.44□□□□□ -0.74
HLA-C-204ENST00000415537 KRTAP20-1Q3LI63 56 aa10.44□□□□□ -0.74
HLA-C-204ENST00000415537 TRAV7A0A075B6U4 112 aa10.39□□□□□ -0.75
HLA-C-204ENST00000415537 KRTAP3-2Q9BYR7 98 aa10.39□□□□□ -0.75
HLA-C-204ENST00000415537 LINC01554Q52M75 96 aa10.37□□□□□ -0.75
HLA-C-204ENST00000415537 ACYP2P14621 99 aa10.36□□□□□ -0.75
HLA-C-204ENST00000415537 MDN1Q9NU22 5596 aa10.36□□□□□ -0.75
HLA-C-204ENST00000415537 SPRR2FQ96RM1 72 aa10.34□□□□□ -0.75
HLA-C-204ENST00000415537 SMIM20Q8N5G0 67 aa10.29□□□□□ -0.76
HLA-C-204ENST00000415537 SPTSSBQ8NFR3 76 aa10.29□□□□□ -0.76
HLA-C-204ENST00000415537 KRTAP8-1Q8IUC2 63 aa10.27□□□□□ -0.77
HLA-C-204ENST00000415537 MT-ATP8P03928 68 aa10.26□□□□□ -0.77
HLA-C-204ENST00000415537 KRTAP12-2P59991 146 aa10.26□□□□□ -0.77
HLA-C-204ENST00000415537 SPRR2EP22531 72 aa10.21□□□□□ -0.77
HLA-C-204ENST00000415537 SPRR2BP35325 72 aa10.21□□□□□ -0.77
HLA-C-204ENST00000415537 SPRR2AP35326 72 aa10.21□□□□□ -0.77
HLA-C-204ENST00000415537 CHKB-CPT1BH3BT56 60 aa10.19□□□□□ -0.78
HLA-C-204ENST00000415537 K7ERU9 68 aa10.19□□□□□ -0.78
HLA-C-204ENST00000415537 KRTAP2-3P0C7H8 128 aa10.15□□□□□ -0.78
HLA-C-204ENST00000415537 KRTAP2-4Q9BYR9 128 aa10.15□□□□□ -0.78
HLA-C-204ENST00000415537 SNURFQ9Y675 71 aa10.08□□□□□ -0.8
HLA-C-204ENST00000415537 KRTAP4-8A0A0G2JLE6 195 aa10.07□□□□□ -0.8
HLA-C-204ENST00000415537 KRTAP4-8Q9BYQ9 185 aa10.07□□□□□ -0.8
HLA-C-204ENST00000415537 LCE1AQ5T7P2 110 aa10.02□□□□□ -0.81
HLA-C-204ENST00000415537 KRTAP10-7P60409 375 aaPredicted RBP10.01□□□□□ -0.81
HLA-C-204ENST00000415537 KRTAP10-12P60413 245 aa9.96□□□□□ -0.82
HLA-C-204ENST00000415537 SPANXA2-OT1Q8N9U9 137 aa9.96□□□□□ -0.82
HLA-C-204ENST00000415537 SPRR2DP22532 72 aa9.88□□□□□ -0.83
HLA-C-204ENST00000415537 SERP2Q8N6R1 65 aa9.87□□□□□ -0.83
HLA-C-204ENST00000415537 KRTAP2-2Q9BYT5 123 aa9.82□□□□□ -0.84
HLA-C-204ENST00000415537 KRTAP2-1Q9BYU5 128 aa9.82□□□□□ -0.84
HLA-C-204ENST00000415537 KRTAP13-4Q3LI77 160 aa9.78□□□□□ -0.84
HLA-C-204ENST00000415537 CAMK2N1Q7Z7J9 78 aa9.75□□□□□ -0.85
HLA-C-204ENST00000415537 COA5Q86WW8 74 aa9.7□□□□□ -0.86
HLA-C-204ENST00000415537 SEC61GP60059 68 aa9.66□□□□□ -0.86
HLA-C-204ENST00000415537 SERP1Q9Y6X1 66 aa9.64□□□□□ -0.87
HLA-C-204ENST00000415537 LCE3BQ5TA77 95 aa9.61□□□□□ -0.87
HLA-C-204ENST00000415537 A0A0D9SG42 100 aa9.53□□□□□ -0.88
HLA-C-204ENST00000415537 COX7CP15954 63 aa9.52□□□□□ -0.89
HLA-C-204ENST00000415537 SPATA8Q6RVD6 105 aa9.47□□□□□ -0.89
HLA-C-204ENST00000415537 A0A1B0GU33 70 aa9.45□□□□□ -0.9
HLA-C-204ENST00000415537 SPINT4Q6UDR6 99 aa9.43□□□□□ -0.9
HLA-C-204ENST00000415537 H7BZZ5 65 aa9.4□□□□□ -0.9
HLA-C-204ENST00000415537 KRTAP19-7Q3SYF9 63 aa9.36□□□□□ -0.91
HLA-C-204ENST00000415537 CYSTM1Q9H1C7 97 aa9.35□□□□□ -0.91
HLA-C-204ENST00000415537 MT1EP04732 61 aa9.29□□□□□ -0.92
HLA-C-204ENST00000415537 KRTAP12-1P59990 96 aa9.29□□□□□ -0.92
HLA-C-204ENST00000415537 LCE5AQ5TCM9 118 aa9.28□□□□□ -0.92
HLA-C-204ENST00000415537 KRTAP19-3Q7Z4W3 81 aa9.27□□□□□ -0.93
HLA-C-204ENST00000415537 A0A1B0GU69 56 aa9.25□□□□□ -0.93
HLA-C-204ENST00000415537 SMIM26A0A096LP01 95 aa9.2□□□□□ -0.94
HLA-C-204ENST00000415537 DSTQ03001 7570 aaKnown RBP9.18□□□□□ -0.94
HLA-C-204ENST00000415537 ANAPC13Q9BS18 74 aa9.13□□□□□ -0.95
HLA-C-204ENST00000415537 KRTAP19-5Q3LI72 72 aa9.12□□□□□ -0.95
HLA-C-204ENST00000415537 A8MU10 97 aa9.08□□□□□ -0.96
HLA-C-204ENST00000415537 MT1GP13640 62 aa9.05□□□□□ -0.96
HLA-C-204ENST00000415537 PP632Q6XCG6 107 aa9.01□□□□□ -0.97
HLA-C-204ENST00000415537 PRR15LQ9BU68 103 aa8.96□□□□□ -0.98
HLA-C-204ENST00000415537 KRTAP4-9Q9BYQ8 210 aa8.95□□□□□ -0.98
HLA-C-204ENST00000415537 TNP1P09430 55 aa8.94□□□□□ -0.98
HLA-C-204ENST00000415537 CCDC179H3BU77 68 aa8.92□□□□□ -0.98
HLA-C-204ENST00000415537 ATP5EP56381 51 aaPredicted RBP8.9□□□□□ -0.98
HLA-C-204ENST00000415537 C10orf95Q9H7T3 257 aa8.89□□□□□ -0.99
HLA-C-204ENST00000415537 LCE3AQ5TA76 89 aa8.87□□□□□ -0.99
HLA-C-204ENST00000415537 MT1LQ93083 61 aa8.87□□□□□ -0.99
HLA-C-204ENST00000415537 MT1MQ8N339 61 aa8.86□□□□□ -0.99
HLA-C-204ENST00000415537 LINC01558Q9Y6Z2 57 aa8.79□□□□□ -1
HLA-C-204ENST00000415537 LCE1DQ5T752 114 aa8.73□□□□□ -1.01
HLA-C-204ENST00000415537 LCE4AQ5TA78 99 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms