RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 K7ERU9 68 aa6.82□□□□□ -1.32
ACTB-202ENST00000414620 PCP4P48539 62 aa6.81□□□□□ -1.32
ACTB-202ENST00000414620 IMUPQ9GZP8 106 aa6.79□□□□□ -1.32
ACTB-202ENST00000414620 NEBP20929 6669 aa6.79□□□□□ -1.32
ACTB-202ENST00000414620 HIST1H4AP62805 103 aaKnown RBP6.78□□□□□ -1.32
ACTB-202ENST00000414620 H0Y9P7 68 aa6.77□□□□□ -1.33
ACTB-202ENST00000414620 CRIPTQ9P021 101 aa6.77□□□□□ -1.33
ACTB-202ENST00000414620 MUC12Q9UKN1 5478 aa6.74□□□□□ -1.33
ACTB-202ENST00000414620 UQCRQO14949 82 aa6.74□□□□□ -1.33
ACTB-202ENST00000414620 ACYP1P07311 99 aa6.74□□□□□ -1.33
ACTB-202ENST00000414620 NDUFC1O43677 76 aa6.73□□□□□ -1.33
ACTB-202ENST00000414620 ATP5EP2Q5VTU8 51 aa6.73□□□□□ -1.33
ACTB-202ENST00000414620 J3QR89 54 aa6.72□□□□□ -1.33
ACTB-202ENST00000414620 ATOX1O00244 68 aa6.71□□□□□ -1.34
ACTB-202ENST00000414620 FAM240AA0A1B0GVK7 77 aa6.7□□□□□ -1.34
ACTB-202ENST00000414620 SCGB1A1P11684 91 aa6.69□□□□□ -1.34
ACTB-202ENST00000414620 H0YAA0 97 aa6.67□□□□□ -1.34
ACTB-202ENST00000414620 KRTAP5-9P26371 169 aa6.67□□□□□ -1.34
ACTB-202ENST00000414620 ADM2Q7Z4H4 148 aa6.67□□□□□ -1.34
ACTB-202ENST00000414620 KRTAP20-1Q3LI63 56 aa6.65□□□□□ -1.34
ACTB-202ENST00000414620 LINC00208Q96KT6 92 aa6.64□□□□□ -1.35
ACTB-202ENST00000414620 A8MUN3 132 aa6.63□□□□□ -1.35
ACTB-202ENST00000414620 LINC00643Q86TS7 51 aa6.59□□□□□ -1.35
ACTB-202ENST00000414620 MP68P56378 58 aa6.55□□□□□ -1.36
ACTB-202ENST00000414620 KMT2DO14686 5537 aa6.54□□□□□ -1.36
ACTB-202ENST00000414620 MT1XP80297 61 aa6.54□□□□□ -1.36
ACTB-202ENST00000414620 OCR1Q9BZK8 76 aa6.54□□□□□ -1.36
ACTB-202ENST00000414620 PRO2289Q9P1D8 64 aa6.53□□□□□ -1.36
ACTB-202ENST00000414620 PLAC4Q8WY50 150 aa6.51□□□□□ -1.37
ACTB-202ENST00000414620 SPRR2FQ96RM1 72 aa6.51□□□□□ -1.37
ACTB-202ENST00000414620 P0C880 135 aa6.5□□□□□ -1.37
ACTB-202ENST00000414620 R4GN34 69 aa6.49□□□□□ -1.37
ACTB-202ENST00000414620 MDN1Q9NU22 5596 aa6.48□□□□□ -1.37
ACTB-202ENST00000414620 M0QZ58 72 aa6.46□□□□□ -1.38
ACTB-202ENST00000414620 SPRR2EP22531 72 aa6.45□□□□□ -1.38
ACTB-202ENST00000414620 SPRR2BP35325 72 aa6.45□□□□□ -1.38
ACTB-202ENST00000414620 SPRR2AP35326 72 aa6.45□□□□□ -1.38
ACTB-202ENST00000414620 KRTAP8-1Q8IUC2 63 aa6.43□□□□□ -1.38
ACTB-202ENST00000414620 C20orf197Q8N268 126 aa6.43□□□□□ -1.38
ACTB-202ENST00000414620 DMAC1Q96GE9 116 aa6.42□□□□□ -1.38
ACTB-202ENST00000414620 H3BPC8 53 aa6.4□□□□□ -1.38
ACTB-202ENST00000414620 KRTAP2-3P0C7H8 128 aa6.4□□□□□ -1.38
ACTB-202ENST00000414620 LINC01554Q52M75 96 aa6.4□□□□□ -1.38
ACTB-202ENST00000414620 KRTAP2-4Q9BYR9 128 aa6.4□□□□□ -1.38
ACTB-202ENST00000414620 KRTAP3-2Q9BYR7 98 aa6.39□□□□□ -1.39
ACTB-202ENST00000414620 KRTAP12-2P59991 146 aa6.37□□□□□ -1.39
ACTB-202ENST00000414620 KRTAP4-8A0A0G2JLE6 195 aa6.33□□□□□ -1.4
ACTB-202ENST00000414620 KRTAP4-8Q9BYQ9 185 aa6.33□□□□□ -1.4
ACTB-202ENST00000414620 SVIPQ8NHG7 77 aa6.32□□□□□ -1.4
ACTB-202ENST00000414620 LCE1AQ5T7P2 110 aa6.31□□□□□ -1.4
ACTB-202ENST00000414620 ANAPC13Q9BS18 74 aa6.29□□□□□ -1.4
ACTB-202ENST00000414620 TRAV7A0A075B6U4 112 aa6.26□□□□□ -1.41
ACTB-202ENST00000414620 KRTAP10-7P60409 375 aaPredicted RBP6.26□□□□□ -1.41
ACTB-202ENST00000414620 MT-ATP8P03928 68 aa6.23□□□□□ -1.41
ACTB-202ENST00000414620 ACYP2P14621 99 aa6.23□□□□□ -1.41
ACTB-202ENST00000414620 SPRR2DP22532 72 aa6.23□□□□□ -1.41
ACTB-202ENST00000414620 KRTAP2-2Q9BYT5 123 aa6.19□□□□□ -1.42
ACTB-202ENST00000414620 KRTAP2-1Q9BYU5 128 aa6.19□□□□□ -1.42
ACTB-202ENST00000414620 KRTAP10-12P60413 245 aa6.18□□□□□ -1.42
ACTB-202ENST00000414620 SPTSSBQ8NFR3 76 aa6.18□□□□□ -1.42
ACTB-202ENST00000414620 CHKB-CPT1BH3BT56 60 aa6.16□□□□□ -1.42
ACTB-202ENST00000414620 SMIM20Q8N5G0 67 aa6.1□□□□□ -1.43
ACTB-202ENST00000414620 SNURFQ9Y675 71 aa6.1□□□□□ -1.43
ACTB-202ENST00000414620 LCE3BQ5TA77 95 aa6.07□□□□□ -1.44
ACTB-202ENST00000414620 RPS28P62857 69 aaKnown RBP6.03□□□□□ -1.44
ACTB-202ENST00000414620 KRTAP13-4Q3LI77 160 aa6.03□□□□□ -1.44
ACTB-202ENST00000414620 CCDC179H3BU77 68 aa6.01□□□□□ -1.45
ACTB-202ENST00000414620 COX7CP15954 63 aa6.01□□□□□ -1.45
ACTB-202ENST00000414620 TMEM258P61165 79 aa5.99□□□□□ -1.45
ACTB-202ENST00000414620 SERP2Q8N6R1 65 aa5.97□□□□□ -1.45
ACTB-202ENST00000414620 CAMK2N1Q7Z7J9 78 aa5.96□□□□□ -1.46
ACTB-202ENST00000414620 SPANXA2-OT1Q8N9U9 137 aa5.96□□□□□ -1.46
ACTB-202ENST00000414620 ATP5EP56381 51 aaPredicted RBP5.87□□□□□ -1.47
ACTB-202ENST00000414620 A0A0D9SG42 100 aa5.85□□□□□ -1.47
ACTB-202ENST00000414620 COA5Q86WW8 74 aa5.85□□□□□ -1.47
ACTB-202ENST00000414620 KRTAP19-7Q3SYF9 63 aa5.84□□□□□ -1.47
ACTB-202ENST00000414620 MT1EP04732 61 aa5.81□□□□□ -1.48
ACTB-202ENST00000414620 LCE5AQ5TCM9 118 aa5.8□□□□□ -1.48
ACTB-202ENST00000414620 SPATA8Q6RVD6 105 aa5.79□□□□□ -1.48
ACTB-202ENST00000414620 SEC61GP60059 68 aa5.78□□□□□ -1.48
ACTB-202ENST00000414620 KRTAP19-3Q7Z4W3 81 aa5.78□□□□□ -1.48
ACTB-202ENST00000414620 SERP1Q9Y6X1 66 aa5.78□□□□□ -1.48
ACTB-202ENST00000414620 SPINT4Q6UDR6 99 aa5.77□□□□□ -1.49
ACTB-202ENST00000414620 SMIM26A0A096LP01 95 aa5.71□□□□□ -1.5
ACTB-202ENST00000414620 A0A1B0GU33 70 aa5.7□□□□□ -1.5
ACTB-202ENST00000414620 KRTAP4-9Q9BYQ8 210 aa5.7□□□□□ -1.5
ACTB-202ENST00000414620 H7BZZ5 65 aa5.68□□□□□ -1.5
ACTB-202ENST00000414620 KRTAP12-1P59990 96 aa5.68□□□□□ -1.5
ACTB-202ENST00000414620 KRTAP19-5Q3LI72 72 aa5.68□□□□□ -1.5
ACTB-202ENST00000414620 DSTQ03001 7570 aaKnown RBP5.67□□□□□ -1.5
ACTB-202ENST00000414620 CYSTM1Q9H1C7 97 aa5.66□□□□□ -1.5
ACTB-202ENST00000414620 PRO0628Q9UI54 55 aa5.64□□□□□ -1.51
ACTB-202ENST00000414620 MT1GP13640 62 aa5.6□□□□□ -1.51
ACTB-202ENST00000414620 A8MU10 97 aa5.56□□□□□ -1.52
ACTB-202ENST00000414620 PP632Q6XCG6 107 aa5.56□□□□□ -1.52
ACTB-202ENST00000414620 A0A1B0GU69 56 aa5.55□□□□□ -1.52
ACTB-202ENST00000414620 MT1MQ8N339 61 aa5.55□□□□□ -1.52
ACTB-202ENST00000414620 V9GYY9 64 aa5.55□□□□□ -1.52
ACTB-202ENST00000414620 GPR98Q8WXG9 6306 aa5.54□□□□□ -1.52
ACTB-202ENST00000414620 LCE1DQ5T752 114 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms