RNA–Protein interactions for RNA: ENST00000414562.1

LINC00330-201, long intergenic non-protein coding RNA 330, humanhuman

TSL 2 BASIC

Gene LINC00330, Length 2,036 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00330-201ENST00000414562 SPINK7P58062 85 aa6.26□□□□□ -1.41
LINC00330-201ENST00000414562 HMCN2Q8NDA2 5059 aa6.25□□□□□ -1.41
LINC00330-201ENST00000414562 PRR4Q16378 134 aa6.24□□□□□ -1.41
LINC00330-201ENST00000414562 C9orf92A6NGG3 77 aa6.23□□□□□ -1.41
LINC00330-201ENST00000414562 Q5W150 140 aa6.22□□□□□ -1.41
LINC00330-201ENST00000414562 LRP2P98164 4655 aa6.2□□□□□ -1.42
LINC00330-201ENST00000414562 MIR22HGQ0VDD5 57 aa6.19□□□□□ -1.42
LINC00330-201ENST00000414562 KRTAP13-3Q3SY46 172 aa6.18□□□□□ -1.42
LINC00330-201ENST00000414562 PCOTHQ58A44 107 aa6.17□□□□□ -1.42
LINC00330-201ENST00000414562 COA5Q86WW8 74 aa6.17□□□□□ -1.42
LINC00330-201ENST00000414562 LCE2CQ5TA81 110 aa6.16□□□□□ -1.42
LINC00330-201ENST00000414562 P0C880 135 aa6.15□□□□□ -1.42
LINC00330-201ENST00000414562 IGLV7-46A0A075B6I9 117 aa6.15□□□□□ -1.43
LINC00330-201ENST00000414562 A8MUU9 505 aa6.13□□□□□ -1.43
LINC00330-201ENST00000414562 C20orf166-AS1Q96NR2 134 aa6.13□□□□□ -1.43
LINC00330-201ENST00000414562 IGKV2D-30A0A075B6S6 120 aa6.11□□□□□ -1.43
LINC00330-201ENST00000414562 IGKV2-30P06310 120 aa6.11□□□□□ -1.43
LINC00330-201ENST00000414562 SPATA8Q6RVD6 105 aa6.08□□□□□ -1.44
LINC00330-201ENST00000414562 LCE2AQ5TA79 106 aaPredicted RBP6.08□□□□□ -1.44
LINC00330-201ENST00000414562 KRTAP25-1Q3LHN0 102 aa6.06□□□□□ -1.44
LINC00330-201ENST00000414562 HRES1P13985 223 aa6.04□□□□□ -1.44
LINC00330-201ENST00000414562 TPRXLQ17RH7 258 aa6.03□□□□□ -1.44
LINC00330-201ENST00000414562 LUZP6Q538Z0 58 aa6.03□□□□□ -1.44
LINC00330-201ENST00000414562 XP32Q5T750 250 aa6.02□□□□□ -1.45
LINC00330-201ENST00000414562 UBR4Q5T4S7 5183 aa6.02□□□□□ -1.45
LINC00330-201ENST00000414562 MUC17Q685J3 4493 aa6.02□□□□□ -1.45
LINC00330-201ENST00000414562 RPL37P61927 97 aaKnown RBP6□□□□□ -1.45
LINC00330-201ENST00000414562 LORP23490 312 aaPredicted RBP5.99□□□□□ -1.45
LINC00330-201ENST00000414562 K7ERS5 55 aa5.98□□□□□ -1.45
LINC00330-201ENST00000414562 ACYP2P14621 99 aa5.96□□□□□ -1.46
LINC00330-201ENST00000414562 DMAC1Q96GE9 116 aa5.94□□□□□ -1.46
LINC00330-201ENST00000414562 UQCR11O14957 56 aa5.93□□□□□ -1.46
LINC00330-201ENST00000414562 MUC2Q02817 5179 aa5.93□□□□□ -1.46
LINC00330-201ENST00000414562 RNF213Q63HN8 5207 aa5.92□□□□□ -1.46
LINC00330-201ENST00000414562 NDUFAF8A1L188 74 aa5.91□□□□□ -1.46
LINC00330-201ENST00000414562 KRTAP4-1Q9BYQ7 146 aa5.91□□□□□ -1.46
LINC00330-201ENST00000414562 COX6B2Q6YFQ2 88 aa5.82□□□□□ -1.48
LINC00330-201ENST00000414562 A0A1B0GU69 56 aa5.79□□□□□ -1.48
LINC00330-201ENST00000414562 KRTAP3-1Q9BYR8 98 aa5.79□□□□□ -1.48
LINC00330-201ENST00000414562 KRTAP15-1Q3LI76 137 aa5.78□□□□□ -1.48
LINC00330-201ENST00000414562 KRTAP23-1A1A580 65 aa5.73□□□□□ -1.49
LINC00330-201ENST00000414562 FAT4Q6V0I7 4981 aa5.71□□□□□ -1.49
LINC00330-201ENST00000414562 SPINT4Q6UDR6 99 aa5.71□□□□□ -1.5
LINC00330-201ENST00000414562 KRTAP19-2Q3LHN2 52 aa5.7□□□□□ -1.5
LINC00330-201ENST00000414562 H1FX-AS1Q4G0G2 97 aa5.67□□□□□ -1.5
LINC00330-201ENST00000414562 CAMK2N1Q7Z7J9 78 aa5.67□□□□□ -1.5
LINC00330-201ENST00000414562 S4R3F8 94 aa5.66□□□□□ -1.5
LINC00330-201ENST00000414562 FLGP20930 4061 aaPredicted RBP5.63□□□□□ -1.51
LINC00330-201ENST00000414562 MT1HP80294 61 aa5.49□□□□□ -1.53
LINC00330-201ENST00000414562 A0A1B0GU33 70 aa5.46□□□□□ -1.54
LINC00330-201ENST00000414562 CRIPTQ9P021 101 aa5.41□□□□□ -1.54
LINC00330-201ENST00000414562 KRTAP10-6P60371 365 aaPredicted RBP5.4□□□□□ -1.54
LINC00330-201ENST00000414562 H0YAA0 97 aa5.38□□□□□ -1.55
LINC00330-201ENST00000414562 M0R2T5 61 aa5.3□□□□□ -1.56
LINC00330-201ENST00000414562 KRTAP13-4Q3LI77 160 aa5.28□□□□□ -1.56
LINC00330-201ENST00000414562 KRTAP9-8Q9BYQ0 159 aa5.28□□□□□ -1.56
LINC00330-201ENST00000414562 A0A0D9SG42 100 aa5.26□□□□□ -1.57
LINC00330-201ENST00000414562 M0QZ58 72 aa5.25□□□□□ -1.57
LINC00330-201ENST00000414562 MT2AP02795 61 aa5.23□□□□□ -1.57
LINC00330-201ENST00000414562 PRO2289Q9P1D8 64 aa5.23□□□□□ -1.57
LINC00330-201ENST00000414562 R4GN34 69 aa5.23□□□□□ -1.57
LINC00330-201ENST00000414562 MT1FP04733 61 aa5.21□□□□□ -1.58
LINC00330-201ENST00000414562 C10orf95Q9H7T3 257 aa5.13□□□□□ -1.59
LINC00330-201ENST00000414562 KRTAP10-10P60014 251 aa5.11□□□□□ -1.59
LINC00330-201ENST00000414562 KRTAP9-3Q9BYQ3 159 aa5.09□□□□□ -1.59
LINC00330-201ENST00000414562 KRTAP12-1P59990 96 aa5.09□□□□□ -1.6
LINC00330-201ENST00000414562 KRTAP12-2P59991 146 aa5.09□□□□□ -1.6
LINC00330-201ENST00000414562 PLAC4Q8WY50 150 aa5.09□□□□□ -1.6
LINC00330-201ENST00000414562 KRTAP19-1Q8IUB9 90 aa5.04□□□□□ -1.6
LINC00330-201ENST00000414562 USH2AO75445 5202 aa5.01□□□□□ -1.61
LINC00330-201ENST00000414562 FSIP2Q5CZC0 6907 aa4.97□□□□□ -1.61
LINC00330-201ENST00000414562 SPRR2GQ9BYE4 73 aa4.97□□□□□ -1.61
LINC00330-201ENST00000414562 KRTAP9-2Q9BYQ4 174 aa4.95□□□□□ -1.62
LINC00330-201ENST00000414562 INE1O15225 51 aa4.91□□□□□ -1.62
LINC00330-201ENST00000414562 SSPOA2VEC9 5147 aa4.9□□□□□ -1.62
LINC00330-201ENST00000414562 MT1BP07438 61 aa4.89□□□□□ -1.63
LINC00330-201ENST00000414562 KRTAP19-8Q3LI54 63 aa4.88□□□□□ -1.63
LINC00330-201ENST00000414562 LOC100996750A0A140TA64 210 aa4.78□□□□□ -1.64
LINC00330-201ENST00000414562 KRTAP4-6Q9BYQ5 205 aa4.78□□□□□ -1.64
LINC00330-201ENST00000414562 KRTAP19-4Q3LI73 84 aa4.75□□□□□ -1.65
LINC00330-201ENST00000414562 CRCT1Q9UGL9 99 aa4.72□□□□□ -1.65
LINC00330-201ENST00000414562 FCGBPQ9Y6R7 5405 aaPredicted RBP4.71□□□□□ -1.65
LINC00330-201ENST00000414562 KRTAP19-6Q3LI70 58 aa4.7□□□□□ -1.66
LINC00330-201ENST00000414562 TNP1P09430 55 aa4.68□□□□□ -1.66
LINC00330-201ENST00000414562 MT1XP80297 61 aa4.67□□□□□ -1.66
LINC00330-201ENST00000414562 KRTAP10-5P60370 271 aa4.65□□□□□ -1.66
LINC00330-201ENST00000414562 KRTAP9-6A0A140TA67 174 aa4.62□□□□□ -1.67
LINC00330-201ENST00000414562 SPRR5A0A1B0GTR4 108 aa4.6□□□□□ -1.67
LINC00330-201ENST00000414562 PP632Q6XCG6 107 aa4.57□□□□□ -1.68
LINC00330-201ENST00000414562 KRTAP4-8Q9BYQ9 185 aa4.55□□□□□ -1.68
LINC00330-201ENST00000414562 MACF1Q9UPN3 7388 aaKnown RBP4.53□□□□□ -1.68
LINC00330-201ENST00000414562 KRTAP4-12Q9BQ66 201 aa4.51□□□□□ -1.69
LINC00330-201ENST00000414562 KMT2DO14686 5537 aa4.5□□□□□ -1.69
LINC00330-201ENST00000414562 KRTAP10-7P60409 375 aaPredicted RBP4.48□□□□□ -1.69
LINC00330-201ENST00000414562 KRTAP10-12P60413 245 aa4.45□□□□□ -1.7
LINC00330-201ENST00000414562 LCE3AQ5TA76 89 aa4.45□□□□□ -1.7
LINC00330-201ENST00000414562 SYNE2Q8WXH0 6885 aaKnown RBP4.43□□□□□ -1.7
LINC00330-201ENST00000414562 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.42□□□□□ -1.7
LINC00330-201ENST00000414562 KRTAP4-8A0A0G2JLE6 195 aa4.4□□□□□ -1.7
LINC00330-201ENST00000414562 LCE4AQ5TA78 99 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms