RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 PKHD1L1Q86WI1 4243 aa1.26□□□□□ -2.21
HMGB1P11-201ENST00000413899 F8WEM9 126 aa1.26□□□□□ -2.21
HMGB1P11-201ENST00000413899 NREPQ16612 68 aa1.26□□□□□ -2.21
HMGB1P11-201ENST00000413899 C9orf153Q5TBE3 101 aa1.26□□□□□ -2.21
HMGB1P11-201ENST00000413899 SACSQ9NZJ4 4579 aa1.26□□□□□ -2.21
HMGB1P11-201ENST00000413899 HCG22E2RYF7 251 aa1.25□□□□□ -2.21
HMGB1P11-201ENST00000413899 WFDC13Q8IUB5 93 aa1.25□□□□□ -2.21
HMGB1P11-201ENST00000413899 PRR15Q8IV56 129 aa1.25□□□□□ -2.21
HMGB1P11-201ENST00000413899 TMEM258P61165 79 aa1.24□□□□□ -2.21
HMGB1P11-201ENST00000413899 FAM229BQ4G0N7 80 aa1.24□□□□□ -2.21
HMGB1P11-201ENST00000413899 Q5XG85 94 aa1.24□□□□□ -2.21
HMGB1P11-201ENST00000413899 C20orf197Q8N268 126 aa1.24□□□□□ -2.21
HMGB1P11-201ENST00000413899 TMEM254Q8TBM7 123 aa1.24□□□□□ -2.21
HMGB1P11-201ENST00000413899 SNURFQ9Y675 71 aa1.24□□□□□ -2.21
HMGB1P11-201ENST00000413899 APOBP04114 4563 aaKnown RBP1.24□□□□□ -2.21
HMGB1P11-201ENST00000413899 PKHD1P08F94 4074 aa1.24□□□□□ -2.21
HMGB1P11-201ENST00000413899 DYNC1H1Q14204 4646 aaKnown RBP1.24□□□□□ -2.21
HMGB1P11-201ENST00000413899 FLG2Q5D862 2391 aaPredicted RBP1.23□□□□□ -2.21
HMGB1P11-201ENST00000413899 FAM236DA0A1B0GTK5 79 aa1.23□□□□□ -2.21
HMGB1P11-201ENST00000413899 FAM236CP0DP71 79 aa1.23□□□□□ -2.21
HMGB1P11-201ENST00000413899 C1orf195Q5TG92 126 aa1.23□□□□□ -2.21
HMGB1P11-201ENST00000413899 HRCT1Q6UXD1 115 aa1.23□□□□□ -2.21
HMGB1P11-201ENST00000413899 CASC2Q6XLA1 102 aa1.23□□□□□ -2.21
HMGB1P11-201ENST00000413899 SMIM20Q8N5G0 67 aa1.23□□□□□ -2.21
HMGB1P11-201ENST00000413899 LRP1BQ9NZR2 4599 aa1.23□□□□□ -2.21
HMGB1P11-201ENST00000413899 TRAV22A0A0B4J277 110 aa1.22□□□□□ -2.21
HMGB1P11-201ENST00000413899 J3KT08 172 aa1.22□□□□□ -2.21
HMGB1P11-201ENST00000413899 FP248Q71RG6 208 aaPredicted RBP1.22□□□□□ -2.21
HMGB1P11-201ENST00000413899 SSBP3-AS1Q7Z2R9 100 aa1.22□□□□□ -2.21
HMGB1P11-201ENST00000413899 DPH3Q96FX2 82 aa1.22□□□□□ -2.21
HMGB1P11-201ENST00000413899 KMT2CQ8NEZ4 4911 aaKnown RBP1.22□□□□□ -2.21
HMGB1P11-201ENST00000413899 FAT3Q8TDW7 4589 aa1.21□□□□□ -2.22
HMGB1P11-201ENST00000413899 hDV103S1A0JD37 113 aa1.21□□□□□ -2.22
HMGB1P11-201ENST00000413899 H0Y9P7 68 aa1.21□□□□□ -2.22
HMGB1P11-201ENST00000413899 SMR3BP02814 79 aaPredicted RBP1.21□□□□□ -2.22
HMGB1P11-201ENST00000413899 MT1HL1P0DM35 61 aa1.21□□□□□ -2.22
HMGB1P11-201ENST00000413899 RPS29P62273 56 aaKnown RBP1.21□□□□□ -2.22
HMGB1P11-201ENST00000413899 SPINK6Q6UWN8 80 aa1.21□□□□□ -2.22
HMGB1P11-201ENST00000413899 MRPL34Q9BQ48 92 aaKnown RBP1.21□□□□□ -2.22
HMGB1P11-201ENST00000413899 CYP4F30PQ9H0H9 118 aa1.21□□□□□ -2.22
HMGB1P11-201ENST00000413899 ATP5EP56381 51 aaPredicted RBP1.2□□□□□ -2.22
HMGB1P11-201ENST00000413899 RPS28P62857 69 aaKnown RBP1.2□□□□□ -2.22
HMGB1P11-201ENST00000413899 Q5VSD8 79 aa1.2□□□□□ -2.22
HMGB1P11-201ENST00000413899 SERP1Q9Y6X1 66 aa1.2□□□□□ -2.22
HMGB1P11-201ENST00000413899 RYR3Q15413 4870 aa1.2□□□□□ -2.22
HMGB1P11-201ENST00000413899 VPS13BQ7Z7G8 4022 aa1.2□□□□□ -2.22
HMGB1P11-201ENST00000413899 H3BPC8 53 aa1.19□□□□□ -2.22
HMGB1P11-201ENST00000413899 NDUFC1O43677 76 aa1.19□□□□□ -2.22
HMGB1P11-201ENST00000413899 LINC00208Q96KT6 92 aa1.19□□□□□ -2.22
HMGB1P11-201ENST00000413899 LIMD2Q9BT23 127 aa1.19□□□□□ -2.22
HMGB1P11-201ENST00000413899 KRTAP4-1Q9BYQ7 146 aa1.19□□□□□ -2.22
HMGB1P11-201ENST00000413899 HSPG2P98160 4391 aa1.19□□□□□ -2.22
HMGB1P11-201ENST00000413899 SPINK1P00995 79 aa1.18□□□□□ -2.22
HMGB1P11-201ENST00000413899 RETNLBQ9BQ08 111 aa1.18□□□□□ -2.22
HMGB1P11-201ENST00000413899 TP53AIP1Q9HCN2 124 aa1.18□□□□□ -2.22
HMGB1P11-201ENST00000413899 RYR1P21817 5038 aa1.18□□□□□ -2.22
HMGB1P11-201ENST00000413899 TNXBP22105 4242 aa1.18□□□□□ -2.22
HMGB1P11-201ENST00000413899 NDUFB1O75438 58 aa1.17□□□□□ -2.22
HMGB1P11-201ENST00000413899 LINC00313P59037 77 aa1.17□□□□□ -2.22
HMGB1P11-201ENST00000413899 DMAC1Q96GE9 116 aa1.17□□□□□ -2.22
HMGB1P11-201ENST00000413899 PRO2289Q9P1D8 64 aa1.17□□□□□ -2.22
HMGB1P11-201ENST00000413899 FAT1Q14517 4588 aa1.16□□□□□ -2.22
HMGB1P11-201ENST00000413899 LRP1Q07954 4544 aaKnown RBP1.16□□□□□ -2.22
HMGB1P11-201ENST00000413899 LOC101927531A0A1B0GV80 90 aa1.16□□□□□ -2.22
HMGB1P11-201ENST00000413899 C4orf26Q17RF5 130 aa1.16□□□□□ -2.22
HMGB1P11-201ENST00000413899 TPRXLQ17RH7 258 aa1.16□□□□□ -2.22
HMGB1P11-201ENST00000413899 SPAG11AQ6PDA7 123 aa1.16□□□□□ -2.22
HMGB1P11-201ENST00000413899 COA5Q86WW8 74 aa1.16□□□□□ -2.22
HMGB1P11-201ENST00000413899 KIAA1109Q2LD37 5005 aa1.15□□□□□ -2.23
HMGB1P11-201ENST00000413899 C9orf92A6NGG3 77 aa1.15□□□□□ -2.23
HMGB1P11-201ENST00000413899 EPPK1P58107 5090 aaKnown RBP1.15□□□□□ -2.23
HMGB1P11-201ENST00000413899 RPL37P61927 97 aaKnown RBP1.14□□□□□ -2.23
HMGB1P11-201ENST00000413899 Q1T7F1 81 aa1.14□□□□□ -2.23
HMGB1P11-201ENST00000413899 KRTAP19-2Q3LHN2 52 aa1.14□□□□□ -2.23
HMGB1P11-201ENST00000413899 Q5VV11 94 aa1.14□□□□□ -2.23
HMGB1P11-201ENST00000413899 A8MUN3 132 aa1.13□□□□□ -2.23
HMGB1P11-201ENST00000413899 C7orf65Q6ZTY9 151 aa1.13□□□□□ -2.23
HMGB1P11-201ENST00000413899 LINC01558Q9Y6Z2 57 aa1.12□□□□□ -2.23
HMGB1P11-201ENST00000413899 MYCBP2O75592 4640 aa1.12□□□□□ -2.23
HMGB1P11-201ENST00000413899 HERC2O95714 4834 aa1.11□□□□□ -2.23
HMGB1P11-201ENST00000413899 SPINK7P58062 85 aa1.11□□□□□ -2.23
HMGB1P11-201ENST00000413899 BIRC6Q9NR09 4857 aa1.11□□□□□ -2.23
HMGB1P11-201ENST00000413899 COX6B2Q6YFQ2 88 aa1.1□□□□□ -2.23
HMGB1P11-201ENST00000413899 LCA10Q71F78 164 aa1.1□□□□□ -2.23
HMGB1P11-201ENST00000413899 PRR15LQ9BU68 103 aa1.1□□□□□ -2.23
HMGB1P11-201ENST00000413899 ABCA13Q86UQ4 5058 aa1.1□□□□□ -2.23
HMGB1P11-201ENST00000413899 ACYP2P14621 99 aa1.09□□□□□ -2.23
HMGB1P11-201ENST00000413899 H0YAA0 97 aa1.08□□□□□ -2.24
HMGB1P11-201ENST00000413899 DMBT1Q9UGM3 2413 aaPredicted RBP1.08□□□□□ -2.24
HMGB1P11-201ENST00000413899 LPAP08519 4548 aa1.08□□□□□ -2.24
HMGB1P11-201ENST00000413899 A6NN06 94 aa1.07□□□□□ -2.24
HMGB1P11-201ENST00000413899 BRK1Q8WUW1 75 aa1.07□□□□□ -2.24
HMGB1P11-201ENST00000413899 CDC42SE1Q9NRR8 79 aa1.07□□□□□ -2.24
HMGB1P11-201ENST00000413899 LRP2P98164 4655 aa1.07□□□□□ -2.24
HMGB1P11-201ENST00000413899 CHKB-CPT1BH3BT56 60 aa1.06□□□□□ -2.24
HMGB1P11-201ENST00000413899 SPATA8Q6RVD6 105 aa1.06□□□□□ -2.24
HMGB1P11-201ENST00000413899 MUC17Q685J3 4493 aa1.06□□□□□ -2.24
HMGB1P11-201ENST00000413899 A0A1B0GU69 56 aa1.05□□□□□ -2.24
HMGB1P11-201ENST00000413899 ATP11AUNQ6ZP68 121 aa1.05□□□□□ -2.24
HMGB1P11-201ENST00000413899 S4R3F8 94 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms