RNA–Protein interactions for RNA: ENST00000413354.5

MCF2L-211, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-211ENST00000413354 KLKP1Q107X0 134 aa7.1□□□□□ -1.27
MCF2L-211ENST00000413354 A8MUN3 132 aa7.09□□□□□ -1.27
MCF2L-211ENST00000413354 SPRR2GQ9BYE4 73 aa7.09□□□□□ -1.27
MCF2L-211ENST00000413354 MP68P56378 58 aa7.08□□□□□ -1.28
MCF2L-211ENST00000413354 Q5VV11 94 aa7.07□□□□□ -1.28
MCF2L-211ENST00000413354 LINC00208Q96KT6 92 aa7.07□□□□□ -1.28
MCF2L-211ENST00000413354 NDUFC1O43677 76 aa7.06□□□□□ -1.28
MCF2L-211ENST00000413354 IMUPQ9GZP8 106 aa7.06□□□□□ -1.28
MCF2L-211ENST00000413354 OCR1Q9BZK8 76 aa7.05□□□□□ -1.28
MCF2L-211ENST00000413354 KRTAP19-8Q3LI54 63 aa7.04□□□□□ -1.28
MCF2L-211ENST00000413354 CRIPTQ9P021 101 aa7.04□□□□□ -1.28
MCF2L-211ENST00000413354 MACF1Q9UPN3 7388 aaKnown RBP7.02□□□□□ -1.29
MCF2L-211ENST00000413354 MT1BP07438 61 aa7.01□□□□□ -1.29
MCF2L-211ENST00000413354 H0YAA0 97 aa7□□□□□ -1.29
MCF2L-211ENST00000413354 H3BPC8 53 aa6.99□□□□□ -1.29
MCF2L-211ENST00000413354 A6NN06 94 aa6.97□□□□□ -1.29
MCF2L-211ENST00000413354 SCGB1A1P11684 91 aa6.96□□□□□ -1.3
MCF2L-211ENST00000413354 SYNE2Q8WXH0 6885 aaKnown RBP6.92□□□□□ -1.3
MCF2L-211ENST00000413354 KRTAP6-3Q3LI67 103 aa6.89□□□□□ -1.31
MCF2L-211ENST00000413354 ADM2Q7Z4H4 148 aa6.89□□□□□ -1.31
MCF2L-211ENST00000413354 KRTAP10-5P60370 271 aa6.87□□□□□ -1.31
MCF2L-211ENST00000413354 DMAC1Q96GE9 116 aa6.86□□□□□ -1.31
MCF2L-211ENST00000413354 K7ERU9 68 aa6.82□□□□□ -1.32
MCF2L-211ENST00000413354 C20orf197Q8N268 126 aa6.82□□□□□ -1.32
MCF2L-211ENST00000413354 SMIM20Q8N5G0 67 aa6.8□□□□□ -1.32
MCF2L-211ENST00000413354 MT-ATP8P03928 68 aa6.77□□□□□ -1.33
MCF2L-211ENST00000413354 TRAV7A0A075B6U4 112 aa6.75□□□□□ -1.33
MCF2L-211ENST00000413354 R4GN34 69 aa6.74□□□□□ -1.33
MCF2L-211ENST00000413354 P0C880 135 aa6.71□□□□□ -1.34
MCF2L-211ENST00000413354 ACYP2P14621 99 aa6.71□□□□□ -1.34
MCF2L-211ENST00000413354 PLAC4Q8WY50 150 aa6.69□□□□□ -1.34
MCF2L-211ENST00000413354 PRO2289Q9P1D8 64 aa6.69□□□□□ -1.34
MCF2L-211ENST00000413354 M0QZ58 72 aa6.67□□□□□ -1.34
MCF2L-211ENST00000413354 SPTSSBQ8NFR3 76 aa6.67□□□□□ -1.34
MCF2L-211ENST00000413354 CHKB-CPT1BH3BT56 60 aa6.61□□□□□ -1.35
MCF2L-211ENST00000413354 MT1XP80297 61 aa6.59□□□□□ -1.35
MCF2L-211ENST00000413354 KRTAP5-9P26371 169 aa6.58□□□□□ -1.36
MCF2L-211ENST00000413354 SNURFQ9Y675 71 aa6.58□□□□□ -1.36
MCF2L-211ENST00000413354 LINC01554Q52M75 96 aa6.56□□□□□ -1.36
MCF2L-211ENST00000413354 MUC12Q9UKN1 5478 aa6.56□□□□□ -1.36
MCF2L-211ENST00000413354 NEBP20929 6669 aa6.55□□□□□ -1.36
MCF2L-211ENST00000413354 SPANXA2-OT1Q8N9U9 137 aa6.55□□□□□ -1.36
MCF2L-211ENST00000413354 SERP2Q8N6R1 65 aa6.53□□□□□ -1.36
MCF2L-211ENST00000413354 KRTAP12-2P59991 146 aa6.47□□□□□ -1.37
MCF2L-211ENST00000413354 KMT2DO14686 5537 aa6.45□□□□□ -1.38
MCF2L-211ENST00000413354 KRTAP8-1Q8IUC2 63 aa6.4□□□□□ -1.38
MCF2L-211ENST00000413354 SPRR2FQ96RM1 72 aa6.4□□□□□ -1.38
MCF2L-211ENST00000413354 MDN1Q9NU22 5596 aa6.38□□□□□ -1.39
MCF2L-211ENST00000413354 KRTAP20-1Q3LI63 56 aa6.37□□□□□ -1.39
MCF2L-211ENST00000413354 COA5Q86WW8 74 aa6.34□□□□□ -1.39
MCF2L-211ENST00000413354 COX7CP15954 63 aa6.33□□□□□ -1.4
MCF2L-211ENST00000413354 SPRR2EP22531 72 aa6.3□□□□□ -1.4
MCF2L-211ENST00000413354 SPRR2BP35325 72 aa6.3□□□□□ -1.4
MCF2L-211ENST00000413354 SPRR2AP35326 72 aa6.3□□□□□ -1.4
MCF2L-211ENST00000413354 SEC61GP60059 68 aa6.27□□□□□ -1.41
MCF2L-211ENST00000413354 KRTAP10-7P60409 375 aaPredicted RBP6.27□□□□□ -1.41
MCF2L-211ENST00000413354 KRTAP10-12P60413 245 aa6.27□□□□□ -1.41
MCF2L-211ENST00000413354 KRTAP13-4Q3LI77 160 aa6.26□□□□□ -1.41
MCF2L-211ENST00000413354 KRTAP4-8A0A0G2JLE6 195 aa6.25□□□□□ -1.41
MCF2L-211ENST00000413354 KRTAP4-8Q9BYQ9 185 aa6.25□□□□□ -1.41
MCF2L-211ENST00000413354 SERP1Q9Y6X1 66 aa6.25□□□□□ -1.41
MCF2L-211ENST00000413354 H7BZZ5 65 aa6.22□□□□□ -1.41
MCF2L-211ENST00000413354 KRTAP2-3P0C7H8 128 aa6.21□□□□□ -1.42
MCF2L-211ENST00000413354 CAMK2N1Q7Z7J9 78 aa6.21□□□□□ -1.42
MCF2L-211ENST00000413354 KRTAP2-4Q9BYR9 128 aa6.21□□□□□ -1.42
MCF2L-211ENST00000413354 LCE1AQ5T7P2 110 aa6.2□□□□□ -1.42
MCF2L-211ENST00000413354 CYSTM1Q9H1C7 97 aa6.16□□□□□ -1.42
MCF2L-211ENST00000413354 A0A1B0GU33 70 aa6.12□□□□□ -1.43
MCF2L-211ENST00000413354 ANAPC13Q9BS18 74 aa6.12□□□□□ -1.43
MCF2L-211ENST00000413354 A0A0D9SG42 100 aa6.11□□□□□ -1.43
MCF2L-211ENST00000413354 SPRR2DP22532 72 aa6.1□□□□□ -1.43
MCF2L-211ENST00000413354 SPATA8Q6RVD6 105 aa6.08□□□□□ -1.44
MCF2L-211ENST00000413354 A0A1B0GU69 56 aa6.04□□□□□ -1.44
MCF2L-211ENST00000413354 SPINT4Q6UDR6 99 aa6.03□□□□□ -1.44
MCF2L-211ENST00000413354 KRTAP2-2Q9BYT5 123 aa6.02□□□□□ -1.45
MCF2L-211ENST00000413354 KRTAP2-1Q9BYU5 128 aa6.02□□□□□ -1.45
MCF2L-211ENST00000413354 SMIM26A0A096LP01 95 aa5.98□□□□□ -1.45
MCF2L-211ENST00000413354 ATP5EP56381 51 aaPredicted RBP5.98□□□□□ -1.45
MCF2L-211ENST00000413354 KRTAP12-1P59990 96 aa5.98□□□□□ -1.45
MCF2L-211ENST00000413354 CCDC179H3BU77 68 aa5.95□□□□□ -1.46
MCF2L-211ENST00000413354 LCE3BQ5TA77 95 aa5.92□□□□□ -1.46
MCF2L-211ENST00000413354 PRR15LQ9BU68 103 aa5.91□□□□□ -1.46
MCF2L-211ENST00000413354 KRTAP19-7Q3SYF9 63 aa5.88□□□□□ -1.47
MCF2L-211ENST00000413354 A8MU10 97 aa5.85□□□□□ -1.47
MCF2L-211ENST00000413354 MT1EP04732 61 aa5.84□□□□□ -1.47
MCF2L-211ENST00000413354 KRTAP19-3Q7Z4W3 81 aa5.81□□□□□ -1.48
MCF2L-211ENST00000413354 TMEM258P61165 79 aa5.8□□□□□ -1.48
MCF2L-211ENST00000413354 LCE5AQ5TCM9 118 aa5.8□□□□□ -1.48
MCF2L-211ENST00000413354 LINC01558Q9Y6Z2 57 aa5.8□□□□□ -1.48
MCF2L-211ENST00000413354 KRTAP19-5Q3LI72 72 aa5.75□□□□□ -1.49
MCF2L-211ENST00000413354 TNP1P09430 55 aa5.74□□□□□ -1.49
MCF2L-211ENST00000413354 C10orf95Q9H7T3 257 aa5.7□□□□□ -1.5
MCF2L-211ENST00000413354 UQCR11O14957 56 aa5.68□□□□□ -1.5
MCF2L-211ENST00000413354 MT1GP13640 62 aa5.67□□□□□ -1.5
MCF2L-211ENST00000413354 PP632Q6XCG6 107 aa5.67□□□□□ -1.5
MCF2L-211ENST00000413354 LCE3AQ5TA76 89 aa5.64□□□□□ -1.51
MCF2L-211ENST00000413354 MT1LQ93083 61 aa5.59□□□□□ -1.51
MCF2L-211ENST00000413354 DSTQ03001 7570 aaKnown RBP5.57□□□□□ -1.52
MCF2L-211ENST00000413354 LOC100996750A0A140TA64 210 aa5.57□□□□□ -1.52
MCF2L-211ENST00000413354 KRTAP4-6Q9BYQ5 205 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms