RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 RPL37P61927 97 aaKnown RBP6.02□□□□□ -1.44
TRAFD1-202ENST00000412615 RYR1P21817 5038 aa6□□□□□ -1.45
TRAFD1-202ENST00000412615 XP32Q5T750 250 aa5.99□□□□□ -1.45
TRAFD1-202ENST00000412615 RYR3Q15413 4870 aa5.97□□□□□ -1.45
TRAFD1-202ENST00000412615 KRTAP17-1Q9BYP8 105 aa5.97□□□□□ -1.45
TRAFD1-202ENST00000412615 A0A1B0GU33 70 aa5.96□□□□□ -1.46
TRAFD1-202ENST00000412615 DMBT1Q9UGM3 2413 aaPredicted RBP5.95□□□□□ -1.46
TRAFD1-202ENST00000412615 MT1HL1P0DM35 61 aa5.95□□□□□ -1.46
TRAFD1-202ENST00000412615 H1FX-AS1Q4G0G2 97 aa5.93□□□□□ -1.46
TRAFD1-202ENST00000412615 H0YAA0 97 aa5.92□□□□□ -1.46
TRAFD1-202ENST00000412615 PRAC1Q96KF2 57 aa5.91□□□□□ -1.46
TRAFD1-202ENST00000412615 KIAA1109Q2LD37 5005 aa5.88□□□□□ -1.47
TRAFD1-202ENST00000412615 S4R3F8 94 aa5.85□□□□□ -1.47
TRAFD1-202ENST00000412615 ADM2Q7Z4H4 148 aa5.84□□□□□ -1.47
TRAFD1-202ENST00000412615 TPRXLQ17RH7 258 aa5.83□□□□□ -1.48
TRAFD1-202ENST00000412615 MYCBP2O75592 4640 aa5.83□□□□□ -1.48
TRAFD1-202ENST00000412615 SEC61BP60468 96 aaKnown RBP5.79□□□□□ -1.48
TRAFD1-202ENST00000412615 KRTAP10-6P60371 365 aaPredicted RBP5.79□□□□□ -1.48
TRAFD1-202ENST00000412615 K7ERS5 55 aa5.77□□□□□ -1.49
TRAFD1-202ENST00000412615 EPPK1P58107 5090 aaKnown RBP5.76□□□□□ -1.49
TRAFD1-202ENST00000412615 CSAG1Q6PB30 78 aa5.71□□□□□ -1.49
TRAFD1-202ENST00000412615 KRTAP4-5Q9BYR2 181 aa5.71□□□□□ -1.5
TRAFD1-202ENST00000412615 ROMO1P60602 79 aa5.7□□□□□ -1.5
TRAFD1-202ENST00000412615 KRTAP13-4Q3LI77 160 aa5.69□□□□□ -1.5
TRAFD1-202ENST00000412615 P0C880 135 aa5.68□□□□□ -1.5
TRAFD1-202ENST00000412615 LRP2P98164 4655 aa5.68□□□□□ -1.5
TRAFD1-202ENST00000412615 LPAP08519 4548 aa5.66□□□□□ -1.5
TRAFD1-202ENST00000412615 A0A0D9SG42 100 aa5.65□□□□□ -1.51
TRAFD1-202ENST00000412615 ABCA13Q86UQ4 5058 aa5.63□□□□□ -1.51
TRAFD1-202ENST00000412615 KRTAP25-1Q3LHN0 102 aa5.59□□□□□ -1.51
TRAFD1-202ENST00000412615 M0QZ58 72 aa5.56□□□□□ -1.52
TRAFD1-202ENST00000412615 LCE2BO14633 110 aa5.55□□□□□ -1.52
TRAFD1-202ENST00000412615 KRTAP12-2P59991 146 aa5.51□□□□□ -1.53
TRAFD1-202ENST00000412615 LUZP6Q538Z0 58 aa5.5□□□□□ -1.53
TRAFD1-202ENST00000412615 KRTAP12-1P59990 96 aa5.49□□□□□ -1.53
TRAFD1-202ENST00000412615 LCE2CQ5TA81 110 aa5.49□□□□□ -1.53
TRAFD1-202ENST00000412615 CRIPTQ9P021 101 aa5.49□□□□□ -1.53
TRAFD1-202ENST00000412615 SPINT4Q6UDR6 99 aa5.49□□□□□ -1.53
TRAFD1-202ENST00000412615 KRTAP4-1Q9BYQ7 146 aa5.48□□□□□ -1.53
TRAFD1-202ENST00000412615 MUC17Q685J3 4493 aa5.47□□□□□ -1.53
TRAFD1-202ENST00000412615 HERC2O95714 4834 aa5.46□□□□□ -1.54
TRAFD1-202ENST00000412615 R4GN34 69 aa5.43□□□□□ -1.54
TRAFD1-202ENST00000412615 LCE2AQ5TA79 106 aaPredicted RBP5.41□□□□□ -1.54
TRAFD1-202ENST00000412615 KRTAP19-2Q3LHN2 52 aa5.39□□□□□ -1.55
TRAFD1-202ENST00000412615 NDUFAF8A1L188 74 aa5.38□□□□□ -1.55
TRAFD1-202ENST00000412615 BIRC6Q9NR09 4857 aa5.36□□□□□ -1.55
TRAFD1-202ENST00000412615 LORP23490 312 aaPredicted RBP5.33□□□□□ -1.56
TRAFD1-202ENST00000412615 C10orf95Q9H7T3 257 aa5.33□□□□□ -1.56
TRAFD1-202ENST00000412615 MUC2Q02817 5179 aa5.21□□□□□ -1.58
TRAFD1-202ENST00000412615 FLGP20930 4061 aaPredicted RBP5.21□□□□□ -1.58
TRAFD1-202ENST00000412615 HMCN2Q8NDA2 5059 aa5.17□□□□□ -1.58
TRAFD1-202ENST00000412615 PCLOQ9Y6V0 5065 aa5.16□□□□□ -1.58
TRAFD1-202ENST00000412615 HERC1Q15751 4861 aa5.16□□□□□ -1.58
TRAFD1-202ENST00000412615 CAMK2N1Q7Z7J9 78 aa5.14□□□□□ -1.59
TRAFD1-202ENST00000412615 KRTAP15-1Q3LI76 137 aa5.13□□□□□ -1.59
TRAFD1-202ENST00000412615 PP632Q6XCG6 107 aa5.02□□□□□ -1.61
TRAFD1-202ENST00000412615 M0R2T5 61 aa5.01□□□□□ -1.61
TRAFD1-202ENST00000412615 MT1HP80294 61 aa4.98□□□□□ -1.61
TRAFD1-202ENST00000412615 SPRR2GQ9BYE4 73 aa4.98□□□□□ -1.61
TRAFD1-202ENST00000412615 FAT4Q6V0I7 4981 aa4.96□□□□□ -1.62
TRAFD1-202ENST00000412615 RNF213Q63HN8 5207 aa4.95□□□□□ -1.62
TRAFD1-202ENST00000412615 TNP1P09430 55 aa4.95□□□□□ -1.62
TRAFD1-202ENST00000412615 PLAC4Q8WY50 150 aa4.94□□□□□ -1.62
TRAFD1-202ENST00000412615 KRTAP19-1Q8IUB9 90 aa4.93□□□□□ -1.62
TRAFD1-202ENST00000412615 UBR4Q5T4S7 5183 aa4.91□□□□□ -1.62
TRAFD1-202ENST00000412615 KRTAP23-1A1A580 65 aa4.89□□□□□ -1.63
TRAFD1-202ENST00000412615 KRTAP10-10P60014 251 aa4.89□□□□□ -1.63
TRAFD1-202ENST00000412615 MT2AP02795 61 aa4.88□□□□□ -1.63
TRAFD1-202ENST00000412615 MT1FP04733 61 aa4.87□□□□□ -1.63
TRAFD1-202ENST00000412615 KRTAP9-8Q9BYQ0 159 aa4.86□□□□□ -1.63
TRAFD1-202ENST00000412615 KRTAP19-8Q3LI54 63 aa4.78□□□□□ -1.64
TRAFD1-202ENST00000412615 MT1BP07438 61 aa4.69□□□□□ -1.66
TRAFD1-202ENST00000412615 PRO2289Q9P1D8 64 aa4.67□□□□□ -1.66
TRAFD1-202ENST00000412615 LCE3AQ5TA76 89 aa4.66□□□□□ -1.66
TRAFD1-202ENST00000412615 KRTAP9-3Q9BYQ3 159 aa4.66□□□□□ -1.66
TRAFD1-202ENST00000412615 KRTAP10-5P60370 271 aa4.64□□□□□ -1.67
TRAFD1-202ENST00000412615 MT1XP80297 61 aa4.63□□□□□ -1.67
TRAFD1-202ENST00000412615 SPRR5A0A1B0GTR4 108 aa4.6□□□□□ -1.67
TRAFD1-202ENST00000412615 KRTAP8-1Q8IUC2 63 aa4.58□□□□□ -1.68
TRAFD1-202ENST00000412615 KRTAP10-12P60413 245 aa4.53□□□□□ -1.68
TRAFD1-202ENST00000412615 KRTAP10-7P60409 375 aaPredicted RBP4.48□□□□□ -1.69
TRAFD1-202ENST00000412615 KRTAP12-3P60328 96 aa4.47□□□□□ -1.69
TRAFD1-202ENST00000412615 INE1O15225 51 aa4.3□□□□□ -1.72
TRAFD1-202ENST00000412615 KRTAP19-5Q3LI72 72 aa4.29□□□□□ -1.72
TRAFD1-202ENST00000412615 USH2AO75445 5202 aa4.29□□□□□ -1.72
TRAFD1-202ENST00000412615 KRTAP4-8A0A0G2JLE6 195 aa4.22□□□□□ -1.73
TRAFD1-202ENST00000412615 KRTAP4-8Q9BYQ9 185 aa4.22□□□□□ -1.73
TRAFD1-202ENST00000412615 LCE3CQ5T5A8 94 aa4.19□□□□□ -1.74
TRAFD1-202ENST00000412615 KMT2DO14686 5537 aa4.18□□□□□ -1.74
TRAFD1-202ENST00000412615 KRTAP19-7Q3SYF9 63 aa4.13□□□□□ -1.75
TRAFD1-202ENST00000412615 KRTAP19-4Q3LI73 84 aa4.08□□□□□ -1.76
TRAFD1-202ENST00000412615 SSPOA2VEC9 5147 aa4.08□□□□□ -1.76
TRAFD1-202ENST00000412615 KRTAP19-6Q3LI70 58 aa4.08□□□□□ -1.76
TRAFD1-202ENST00000412615 MT1EP04732 61 aa4.03□□□□□ -1.76
TRAFD1-202ENST00000412615 MT1LQ93083 61 aa4.01□□□□□ -1.77
TRAFD1-202ENST00000412615 KRTAP9-6A8MVA2 160 aa3.99□□□□□ -1.77
TRAFD1-202ENST00000412615 KRTAP4-7Q9BYR0 210 aa3.98□□□□□ -1.77
TRAFD1-202ENST00000412615 FSIP2Q5CZC0 6907 aa3.92□□□□□ -1.78
TRAFD1-202ENST00000412615 KRTAP2-3P0C7H8 128 aa3.85□□□□□ -1.79
TRAFD1-202ENST00000412615 KRTAP2-4Q9BYR9 128 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms