RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 MUC12Q9UKN1 5478 aa9.82□□□□□ -0.84
MSH6-202ENST00000411819 ACYP1P07311 99 aa9.8□□□□□ -0.84
MSH6-202ENST00000411819 HIST1H4AP62805 103 aaKnown RBP9.8□□□□□ -0.84
MSH6-202ENST00000411819 CRIPTQ9P021 101 aa9.8□□□□□ -0.84
MSH6-202ENST00000411819 IMUPQ9GZP8 106 aa9.79□□□□□ -0.84
MSH6-202ENST00000411819 ATP5EP2Q5VTU8 51 aa9.78□□□□□ -0.84
MSH6-202ENST00000411819 H0Y9P7 68 aa9.77□□□□□ -0.85
MSH6-202ENST00000411819 UQCRQO14949 82 aa9.75□□□□□ -0.85
MSH6-202ENST00000411819 ATOX1O00244 68 aa9.74□□□□□ -0.85
MSH6-202ENST00000411819 NDUFC1O43677 76 aa9.74□□□□□ -0.85
MSH6-202ENST00000411819 FAM240AA0A1B0GVK7 77 aa9.72□□□□□ -0.85
MSH6-202ENST00000411819 H0YAA0 97 aa9.66□□□□□ -0.86
MSH6-202ENST00000411819 A8MUN3 132 aa9.61□□□□□ -0.87
MSH6-202ENST00000411819 ADM2Q7Z4H4 148 aa9.6□□□□□ -0.87
MSH6-202ENST00000411819 KRTAP5-9P26371 169 aa9.59□□□□□ -0.87
MSH6-202ENST00000411819 LINC00208Q96KT6 92 aa9.59□□□□□ -0.87
MSH6-202ENST00000411819 LINC00643Q86TS7 51 aa9.55□□□□□ -0.88
MSH6-202ENST00000411819 KMT2DO14686 5537 aa9.54□□□□□ -0.88
MSH6-202ENST00000411819 KRTAP20-1Q3LI63 56 aa9.52□□□□□ -0.89
MSH6-202ENST00000411819 MP68P56378 58 aa9.51□□□□□ -0.89
MSH6-202ENST00000411819 MDN1Q9NU22 5596 aa9.5□□□□□ -0.89
MSH6-202ENST00000411819 OCR1Q9BZK8 76 aa9.45□□□□□ -0.9
MSH6-202ENST00000411819 PRO2289Q9P1D8 64 aa9.45□□□□□ -0.9
MSH6-202ENST00000411819 PLAC4Q8WY50 150 aa9.41□□□□□ -0.9
MSH6-202ENST00000411819 R4GN34 69 aa9.39□□□□□ -0.91
MSH6-202ENST00000411819 MT1XP80297 61 aa9.38□□□□□ -0.91
MSH6-202ENST00000411819 C20orf197Q8N268 126 aa9.35□□□□□ -0.91
MSH6-202ENST00000411819 P0C880 135 aa9.34□□□□□ -0.91
MSH6-202ENST00000411819 SPRR2FQ96RM1 72 aa9.33□□□□□ -0.92
MSH6-202ENST00000411819 M0QZ58 72 aa9.31□□□□□ -0.92
MSH6-202ENST00000411819 H3BPC8 53 aa9.3□□□□□ -0.92
MSH6-202ENST00000411819 DMAC1Q96GE9 116 aa9.29□□□□□ -0.92
MSH6-202ENST00000411819 A0A1B0GV90 55 aa9.27□□□□□ -0.93
MSH6-202ENST00000411819 SCGB1A1P11684 91 aa9.24□□□□□ -0.93
MSH6-202ENST00000411819 SPRR2EP22531 72 aa9.24□□□□□ -0.93
MSH6-202ENST00000411819 SPRR2BP35325 72 aa9.24□□□□□ -0.93
MSH6-202ENST00000411819 SPRR2AP35326 72 aa9.24□□□□□ -0.93
MSH6-202ENST00000411819 KRTAP8-1Q8IUC2 63 aa9.23□□□□□ -0.93
MSH6-202ENST00000411819 LINC01554Q52M75 96 aa9.22□□□□□ -0.93
MSH6-202ENST00000411819 KRTAP2-3P0C7H8 128 aa9.19□□□□□ -0.94
MSH6-202ENST00000411819 KRTAP2-4Q9BYR9 128 aa9.19□□□□□ -0.94
MSH6-202ENST00000411819 J3QR89 54 aa9.18□□□□□ -0.94
MSH6-202ENST00000411819 KRTAP3-2Q9BYR7 98 aa9.18□□□□□ -0.94
MSH6-202ENST00000411819 KRTAP12-2P59991 146 aa9.17□□□□□ -0.94
MSH6-202ENST00000411819 TRAV7A0A075B6U4 112 aa9.08□□□□□ -0.96
MSH6-202ENST00000411819 KRTAP4-8A0A0G2JLE6 195 aa9.04□□□□□ -0.96
MSH6-202ENST00000411819 LCE1AQ5T7P2 110 aa9.04□□□□□ -0.96
MSH6-202ENST00000411819 KRTAP4-8Q9BYQ9 185 aa9.04□□□□□ -0.96
MSH6-202ENST00000411819 ACYP2P14621 99 aa9.03□□□□□ -0.96
MSH6-202ENST00000411819 MT-ATP8P03928 68 aa9□□□□□ -0.97
MSH6-202ENST00000411819 SPTSSBQ8NFR3 76 aa8.99□□□□□ -0.97
MSH6-202ENST00000411819 KRTAP10-7P60409 375 aaPredicted RBP8.97□□□□□ -0.97
MSH6-202ENST00000411819 SPRR2DP22532 72 aa8.93□□□□□ -0.98
MSH6-202ENST00000411819 CHKB-CPT1BH3BT56 60 aa8.92□□□□□ -0.98
MSH6-202ENST00000411819 KRTAP10-12P60413 245 aa8.89□□□□□ -0.99
MSH6-202ENST00000411819 SMIM20Q8N5G0 67 aa8.89□□□□□ -0.99
MSH6-202ENST00000411819 KRTAP2-2Q9BYT5 123 aa8.88□□□□□ -0.99
MSH6-202ENST00000411819 KRTAP2-1Q9BYU5 128 aa8.88□□□□□ -0.99
MSH6-202ENST00000411819 SNURFQ9Y675 71 aa8.78□□□□□ -1
MSH6-202ENST00000411819 K7ERU9 68 aa8.73□□□□□ -1.01
MSH6-202ENST00000411819 LCE3BQ5TA77 95 aa8.69□□□□□ -1.02
MSH6-202ENST00000411819 KRTAP13-4Q3LI77 160 aa8.65□□□□□ -1.02
MSH6-202ENST00000411819 SPANXA2-OT1Q8N9U9 137 aa8.65□□□□□ -1.02
MSH6-202ENST00000411819 CAMK2N1Q7Z7J9 78 aa8.63□□□□□ -1.03
MSH6-202ENST00000411819 SERP2Q8N6R1 65 aa8.52□□□□□ -1.05
MSH6-202ENST00000411819 COA5Q86WW8 74 aa8.47□□□□□ -1.05
MSH6-202ENST00000411819 A0A0D9SG42 100 aa8.42□□□□□ -1.06
MSH6-202ENST00000411819 SEC61GP60059 68 aa8.41□□□□□ -1.06
MSH6-202ENST00000411819 SERP1Q9Y6X1 66 aa8.4□□□□□ -1.06
MSH6-202ENST00000411819 KRTAP19-7Q3SYF9 63 aa8.38□□□□□ -1.07
MSH6-202ENST00000411819 MT1EP04732 61 aa8.33□□□□□ -1.08
MSH6-202ENST00000411819 SPATA8Q6RVD6 105 aa8.33□□□□□ -1.08
MSH6-202ENST00000411819 LCE5AQ5TCM9 118 aa8.32□□□□□ -1.08
MSH6-202ENST00000411819 DSTQ03001 7570 aaKnown RBP8.32□□□□□ -1.08
MSH6-202ENST00000411819 SPINT4Q6UDR6 99 aa8.31□□□□□ -1.08
MSH6-202ENST00000411819 KRTAP19-3Q7Z4W3 81 aa8.3□□□□□ -1.08
MSH6-202ENST00000411819 A0A1B0GU33 70 aa8.25□□□□□ -1.09
MSH6-202ENST00000411819 COX7CP15954 63 aa8.2□□□□□ -1.1
MSH6-202ENST00000411819 KRTAP12-1P59990 96 aa8.18□□□□□ -1.1
MSH6-202ENST00000411819 KRTAP19-5Q3LI72 72 aa8.15□□□□□ -1.1
MSH6-202ENST00000411819 KRTAP4-9Q9BYQ8 210 aa8.14□□□□□ -1.11
MSH6-202ENST00000411819 CYSTM1Q9H1C7 97 aa8.14□□□□□ -1.11
MSH6-202ENST00000411819 H7BZZ5 65 aa8.12□□□□□ -1.11
MSH6-202ENST00000411819 GPR98Q8WXG9 6306 aa8.07□□□□□ -1.12
MSH6-202ENST00000411819 MT1GP13640 62 aa8.06□□□□□ -1.12
MSH6-202ENST00000411819 A0A1B0GU69 56 aa8.05□□□□□ -1.12
MSH6-202ENST00000411819 SMIM26A0A096LP01 95 aa8.04□□□□□ -1.12
MSH6-202ENST00000411819 PP632Q6XCG6 107 aa8.04□□□□□ -1.12
MSH6-202ENST00000411819 A8MU10 97 aa7.98□□□□□ -1.13
MSH6-202ENST00000411819 MT1MQ8N339 61 aa7.95□□□□□ -1.14
MSH6-202ENST00000411819 MT1LQ93083 61 aa7.93□□□□□ -1.14
MSH6-202ENST00000411819 LCE1DQ5T752 114 aa7.92□□□□□ -1.14
MSH6-202ENST00000411819 LCE3AQ5TA76 89 aa7.89□□□□□ -1.15
MSH6-202ENST00000411819 C10orf95Q9H7T3 257 aa7.88□□□□□ -1.15
MSH6-202ENST00000411819 TNP1P09430 55 aa7.87□□□□□ -1.15
MSH6-202ENST00000411819 LCE4AQ5TA78 99 aa7.85□□□□□ -1.15
MSH6-202ENST00000411819 MT4P47944 62 aa7.83□□□□□ -1.16
MSH6-202ENST00000411819 ANAPC13Q9BS18 74 aa7.82□□□□□ -1.16
MSH6-202ENST00000411819 HMCN1Q96RW7 5635 aa7.8□□□□□ -1.16
MSH6-202ENST00000411819 KRTAP4-3Q9BYR4 195 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms