RNA–Protein interactions for RNA: ENST00000409938.5

EPHA4-203, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene EPHA4, Length 3,363 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-203ENST00000409938 KRTAP25-1Q3LHN0 102 aa4.04□□□□□ -1.76
EPHA4-203ENST00000409938 KRTAP3-2Q9BYR7 98 aa4.03□□□□□ -1.76
EPHA4-203ENST00000409938 KMT2CQ8NEZ4 4911 aaKnown RBP4.02□□□□□ -1.77
EPHA4-203ENST00000409938 RPL37P61927 97 aaKnown RBP4.01□□□□□ -1.77
EPHA4-203ENST00000409938 KRTAP13-4Q3LI77 160 aa3.99□□□□□ -1.77
EPHA4-203ENST00000409938 XP32Q5T750 250 aa3.98□□□□□ -1.77
EPHA4-203ENST00000409938 RYR1P21817 5038 aa3.95□□□□□ -1.78
EPHA4-203ENST00000409938 K7ERS5 55 aa3.94□□□□□ -1.78
EPHA4-203ENST00000409938 KRTAP17-1Q9BYP8 105 aa3.94□□□□□ -1.78
EPHA4-203ENST00000409938 ROMO1P60602 79 aa3.93□□□□□ -1.78
EPHA4-203ENST00000409938 S4R3F8 94 aa3.93□□□□□ -1.78
EPHA4-203ENST00000409938 MYCBP2O75592 4640 aa3.93□□□□□ -1.78
EPHA4-203ENST00000409938 Q5VSD8 79 aa3.91□□□□□ -1.78
EPHA4-203ENST00000409938 P0C880 135 aa3.9□□□□□ -1.78
EPHA4-203ENST00000409938 MT1HL1P0DM35 61 aa3.9□□□□□ -1.78
EPHA4-203ENST00000409938 LPAP08519 4548 aa3.9□□□□□ -1.79
EPHA4-203ENST00000409938 RYR3Q15413 4870 aa3.89□□□□□ -1.79
EPHA4-203ENST00000409938 TPRXLQ17RH7 258 aa3.87□□□□□ -1.79
EPHA4-203ENST00000409938 LCE2DQ5TA82 110 aaPredicted RBP3.87□□□□□ -1.79
EPHA4-203ENST00000409938 CRIPTQ9P021 101 aa3.87□□□□□ -1.79
EPHA4-203ENST00000409938 KRTAP12-2P59991 146 aa3.85□□□□□ -1.79
EPHA4-203ENST00000409938 A0A0D9SG42 100 aa3.85□□□□□ -1.79
EPHA4-203ENST00000409938 J3QL48 77 aa3.84□□□□□ -1.79
EPHA4-203ENST00000409938 KRTAP12-1P59990 96 aa3.84□□□□□ -1.79
EPHA4-203ENST00000409938 LRP2P98164 4655 aa3.83□□□□□ -1.8
EPHA4-203ENST00000409938 DMBT1Q9UGM3 2413 aaPredicted RBP3.83□□□□□ -1.8
EPHA4-203ENST00000409938 KIAA1109Q2LD37 5005 aa3.81□□□□□ -1.8
EPHA4-203ENST00000409938 H3BS24 57 aa3.8□□□□□ -1.8
EPHA4-203ENST00000409938 M0QZ58 72 aa3.79□□□□□ -1.8
EPHA4-203ENST00000409938 MUC17Q685J3 4493 aa3.78□□□□□ -1.8
EPHA4-203ENST00000409938 C10orf95Q9H7T3 257 aa3.77□□□□□ -1.81
EPHA4-203ENST00000409938 ABCA13Q86UQ4 5058 aa3.76□□□□□ -1.81
EPHA4-203ENST00000409938 KRTAP15-1Q3LI76 137 aa3.75□□□□□ -1.81
EPHA4-203ENST00000409938 EPPK1P58107 5090 aaKnown RBP3.73□□□□□ -1.81
EPHA4-203ENST00000409938 SPINT4Q6UDR6 99 aa3.71□□□□□ -1.82
EPHA4-203ENST00000409938 KRTAP19-2Q3LHN2 52 aa3.68□□□□□ -1.82
EPHA4-203ENST00000409938 KRTAP4-1Q9BYQ7 146 aa3.65□□□□□ -1.83
EPHA4-203ENST00000409938 LORP23490 312 aaPredicted RBP3.64□□□□□ -1.83
EPHA4-203ENST00000409938 KRTAP4-5Q9BYR2 181 aa3.63□□□□□ -1.83
EPHA4-203ENST00000409938 R4GN34 69 aa3.61□□□□□ -1.83
EPHA4-203ENST00000409938 SEC61BP60468 96 aaKnown RBP3.61□□□□□ -1.83
EPHA4-203ENST00000409938 FLGP20930 4061 aaPredicted RBP3.59□□□□□ -1.84
EPHA4-203ENST00000409938 NDUFAF8A1L188 74 aa3.56□□□□□ -1.84
EPHA4-203ENST00000409938 BIRC6Q9NR09 4857 aa3.53□□□□□ -1.84
EPHA4-203ENST00000409938 HERC1Q15751 4861 aa3.52□□□□□ -1.85
EPHA4-203ENST00000409938 HERC2O95714 4834 aa3.5□□□□□ -1.85
EPHA4-203ENST00000409938 PLAC4Q8WY50 150 aa3.48□□□□□ -1.85
EPHA4-203ENST00000409938 PP632Q6XCG6 107 aa3.48□□□□□ -1.85
EPHA4-203ENST00000409938 MUC2Q02817 5179 aa3.46□□□□□ -1.86
EPHA4-203ENST00000409938 PCLOQ9Y6V0 5065 aa3.44□□□□□ -1.86
EPHA4-203ENST00000409938 A0A0A0MQY5 61 aa3.43□□□□□ -1.86
EPHA4-203ENST00000409938 KRTAP23-1A1A580 65 aa3.43□□□□□ -1.86
EPHA4-203ENST00000409938 LCE2BO14633 110 aa3.42□□□□□ -1.86
EPHA4-203ENST00000409938 CAMK2N1Q7Z7J9 78 aa3.4□□□□□ -1.86
EPHA4-203ENST00000409938 HMCN2Q8NDA2 5059 aa3.39□□□□□ -1.87
EPHA4-203ENST00000409938 LCE2CQ5TA81 110 aa3.39□□□□□ -1.87
EPHA4-203ENST00000409938 SPRR5A0A1B0GTR4 108 aa3.37□□□□□ -1.87
EPHA4-203ENST00000409938 SPRR2GQ9BYE4 73 aa3.35□□□□□ -1.87
EPHA4-203ENST00000409938 TNP1P09430 55 aa3.34□□□□□ -1.88
EPHA4-203ENST00000409938 KRTAP19-1Q8IUB9 90 aa3.33□□□□□ -1.88
EPHA4-203ENST00000409938 FAT4Q6V0I7 4981 aa3.28□□□□□ -1.88
EPHA4-203ENST00000409938 LUZP6Q538Z0 58 aa3.26□□□□□ -1.89
EPHA4-203ENST00000409938 MT1HP80294 61 aa3.25□□□□□ -1.89
EPHA4-203ENST00000409938 RNF213Q63HN8 5207 aa3.23□□□□□ -1.89
EPHA4-203ENST00000409938 UBR4Q5T4S7 5183 aa3.22□□□□□ -1.89
EPHA4-203ENST00000409938 MT2AP02795 61 aa3.21□□□□□ -1.9
EPHA4-203ENST00000409938 MT1FP04733 61 aa3.21□□□□□ -1.9
EPHA4-203ENST00000409938 KRTAP19-8Q3LI54 63 aa3.21□□□□□ -1.9
EPHA4-203ENST00000409938 KRTAP9-8Q9BYQ0 159 aa3.21□□□□□ -1.9
EPHA4-203ENST00000409938 LCE3AQ5TA76 89 aa3.19□□□□□ -1.9
EPHA4-203ENST00000409938 KRTAP8-1Q8IUC2 63 aa3.17□□□□□ -1.9
EPHA4-203ENST00000409938 KRTAP10-5P60370 271 aa3.15□□□□□ -1.91
EPHA4-203ENST00000409938 MT1BP07438 61 aa3.14□□□□□ -1.91
EPHA4-203ENST00000409938 MT1XP80297 61 aa3.14□□□□□ -1.91
EPHA4-203ENST00000409938 KRTAP10-10P60014 251 aa3.12□□□□□ -1.91
EPHA4-203ENST00000409938 LCE2AQ5TA79 106 aaPredicted RBP3.12□□□□□ -1.91
EPHA4-203ENST00000409938 M0R2T5 61 aa3.11□□□□□ -1.91
EPHA4-203ENST00000409938 KRTAP9-3Q9BYQ3 159 aa3.07□□□□□ -1.92
EPHA4-203ENST00000409938 KRTAP10-12P60413 245 aa3.03□□□□□ -1.92
EPHA4-203ENST00000409938 KRTAP12-3P60328 96 aa3.03□□□□□ -1.93
EPHA4-203ENST00000409938 KRTAP10-7P60409 375 aaPredicted RBP3.03□□□□□ -1.93
EPHA4-203ENST00000409938 INE1O15225 51 aa2.93□□□□□ -1.94
EPHA4-203ENST00000409938 PRO2289Q9P1D8 64 aa2.92□□□□□ -1.94
EPHA4-203ENST00000409938 KRTAP19-5Q3LI72 72 aa2.9□□□□□ -1.95
EPHA4-203ENST00000409938 LCE3CQ5T5A8 94 aa2.89□□□□□ -1.95
EPHA4-203ENST00000409938 FSIP2Q5CZC0 6907 aa2.85□□□□□ -1.95
EPHA4-203ENST00000409938 KRTAP9-6A8MVA2 160 aa2.82□□□□□ -1.96
EPHA4-203ENST00000409938 KMT2DO14686 5537 aa2.81□□□□□ -1.96
EPHA4-203ENST00000409938 USH2AO75445 5202 aa2.8□□□□□ -1.96
EPHA4-203ENST00000409938 KRTAP19-7Q3SYF9 63 aa2.8□□□□□ -1.96
EPHA4-203ENST00000409938 KRTAP4-8A0A0G2JLE6 195 aa2.8□□□□□ -1.96
EPHA4-203ENST00000409938 KRTAP4-8Q9BYQ9 185 aa2.8□□□□□ -1.96
EPHA4-203ENST00000409938 KRTAP9-2Q9BYQ4 174 aa2.79□□□□□ -1.96
EPHA4-203ENST00000409938 KRTAP19-4Q3LI73 84 aa2.77□□□□□ -1.97
EPHA4-203ENST00000409938 KRTAP2-3P0C7H8 128 aa2.77□□□□□ -1.97
EPHA4-203ENST00000409938 KRTAP2-4Q9BYR9 128 aa2.77□□□□□ -1.97
EPHA4-203ENST00000409938 KRTAP2-1Q9BYU5 128 aa2.77□□□□□ -1.97
EPHA4-203ENST00000409938 SSPOA2VEC9 5147 aa2.72□□□□□ -1.97
EPHA4-203ENST00000409938 MT1LQ93083 61 aa2.71□□□□□ -1.98
EPHA4-203ENST00000409938 MT1EP04732 61 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms