RNA–Protein interactions for RNA: ENST00000409892.5

RAB1A-204, Transcript of RAB1A, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB1A, Length 2,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1A-204ENST00000409892 RPS29P62273 56 aaKnown RBP8.94□□□□□ -0.98
RAB1A-204ENST00000409892 HERC2O95714 4834 aa8.92□□□□□ -0.98
RAB1A-204ENST00000409892 DNAH7Q8WXX0 4024 aa8.91□□□□□ -0.98
RAB1A-204ENST00000409892 HYDINQ4G0P3 5121 aa8.9□□□□□ -0.98
RAB1A-204ENST00000409892 HECTD4Q9Y4D8 3996 aa8.89□□□□□ -0.99
RAB1A-204ENST00000409892 KMT2AQ03164 3969 aa8.85□□□□□ -0.99
RAB1A-204ENST00000409892 SACSQ9NZJ4 4579 aa8.84□□□□□ -0.99
RAB1A-204ENST00000409892 PCLOQ9Y6V0 5065 aa8.84□□□□□ -0.99
RAB1A-204ENST00000409892 PLECQ15149 4684 aaKnown RBP8.84□□□□□ -0.99
RAB1A-204ENST00000409892 M0QZ58 72 aa8.82□□□□□ -1
RAB1A-204ENST00000409892 DNAH6Q9C0G6 4158 aa8.82□□□□□ -1
RAB1A-204ENST00000409892 STARD9Q9P2P6 4700 aa8.82□□□□□ -1
RAB1A-204ENST00000409892 C9orf92A6NGG3 77 aa8.81□□□□□ -1
RAB1A-204ENST00000409892 RYR1P21817 5038 aa8.74□□□□□ -1.01
RAB1A-204ENST00000409892 PP632Q6XCG6 107 aa8.73□□□□□ -1.01
RAB1A-204ENST00000409892 KRTAP10-8P60410 259 aa8.72□□□□□ -1.01
RAB1A-204ENST00000409892 DNAH11Q96DT5 4516 aa8.71□□□□□ -1.02
RAB1A-204ENST00000409892 DNAH2Q9P225 4427 aa8.64□□□□□ -1.03
RAB1A-204ENST00000409892 INE1O15225 51 aa8.62□□□□□ -1.03
RAB1A-204ENST00000409892 SPRR5A0A1B0GTR4 108 aa8.61□□□□□ -1.03
RAB1A-204ENST00000409892 R4GN34 69 aa8.56□□□□□ -1.04
RAB1A-204ENST00000409892 MYCBP2O75592 4640 aa8.5□□□□□ -1.05
RAB1A-204ENST00000409892 KIAA1109Q2LD37 5005 aa8.38□□□□□ -1.07
RAB1A-204ENST00000409892 KRTAP10-2P60368 255 aa8.36□□□□□ -1.07
RAB1A-204ENST00000409892 LRP1BQ9NZR2 4599 aa8.36□□□□□ -1.07
RAB1A-204ENST00000409892 FAT2Q9NYQ8 4349 aa8.35□□□□□ -1.07
RAB1A-204ENST00000409892 ABCA13Q86UQ4 5058 aa8.35□□□□□ -1.07
RAB1A-204ENST00000409892 DNAH5Q8TE73 4624 aa8.33□□□□□ -1.08
RAB1A-204ENST00000409892 KRTAP10-1P60331 282 aa8.3□□□□□ -1.08
RAB1A-204ENST00000409892 PKD1P98161 4303 aa8.26□□□□□ -1.09
RAB1A-204ENST00000409892 APOBP04114 4563 aaKnown RBP8.25□□□□□ -1.09
RAB1A-204ENST00000409892 VPS13BQ7Z7G8 4022 aa8.24□□□□□ -1.09
RAB1A-204ENST00000409892 KRTAP4-5Q9BYR2 181 aa8.2□□□□□ -1.1
RAB1A-204ENST00000409892 PKHD1L1Q86WI1 4243 aa8.2□□□□□ -1.1
RAB1A-204ENST00000409892 KRTAP23-1A1A580 65 aa8.19□□□□□ -1.1
RAB1A-204ENST00000409892 PKHD1P08F94 4074 aa8.15□□□□□ -1.1
RAB1A-204ENST00000409892 UBR4Q5T4S7 5183 aa8.14□□□□□ -1.11
RAB1A-204ENST00000409892 DYNC1H1Q14204 4646 aaKnown RBP8.13□□□□□ -1.11
RAB1A-204ENST00000409892 LRP1Q07954 4544 aaKnown RBP8.1□□□□□ -1.11
RAB1A-204ENST00000409892 HERC1Q15751 4861 aa8.1□□□□□ -1.11
RAB1A-204ENST00000409892 A0A1B0GVY2 172 aa8.09□□□□□ -1.11
RAB1A-204ENST00000409892 Q5VSD8 79 aa8.01□□□□□ -1.13
RAB1A-204ENST00000409892 HSPG2P98160 4391 aa7.96□□□□□ -1.13
RAB1A-204ENST00000409892 FAT1Q14517 4588 aa7.92□□□□□ -1.14
RAB1A-204ENST00000409892 TNXBP22105 4242 aa7.9□□□□□ -1.14
RAB1A-204ENST00000409892 TNP1P09430 55 aa7.88□□□□□ -1.15
RAB1A-204ENST00000409892 SMR3BP02814 79 aaPredicted RBP7.84□□□□□ -1.15
RAB1A-204ENST00000409892 LORP23490 312 aaPredicted RBP7.81□□□□□ -1.16
RAB1A-204ENST00000409892 FAT3Q8TDW7 4589 aa7.78□□□□□ -1.16
RAB1A-204ENST00000409892 KRTAP10-4P60372 401 aaPredicted RBP7.73□□□□□ -1.17
RAB1A-204ENST00000409892 KRTAP9-6A0A140TA67 174 aa7.65□□□□□ -1.18
RAB1A-204ENST00000409892 HMCN2Q8NDA2 5059 aa7.64□□□□□ -1.19
RAB1A-204ENST00000409892 KRTAP9-2Q9BYQ4 174 aa7.58□□□□□ -1.2
RAB1A-204ENST00000409892 RNF213Q63HN8 5207 aa7.44□□□□□ -1.22
RAB1A-204ENST00000409892 MT1HL1P0DM35 61 aa7.36□□□□□ -1.23
RAB1A-204ENST00000409892 KRTAP10-10P60014 251 aa7.35□□□□□ -1.23
RAB1A-204ENST00000409892 FLGP20930 4061 aaPredicted RBP7.32□□□□□ -1.24
RAB1A-204ENST00000409892 LPAP08519 4548 aa7.28□□□□□ -1.24
RAB1A-204ENST00000409892 LCE3AQ5TA76 89 aa7.25□□□□□ -1.25
RAB1A-204ENST00000409892 FAT4Q6V0I7 4981 aa7.23□□□□□ -1.25
RAB1A-204ENST00000409892 KRTAP8-1Q8IUC2 63 aa7.16□□□□□ -1.26
RAB1A-204ENST00000409892 KRTAP10-12P60413 245 aa7.11□□□□□ -1.27
RAB1A-204ENST00000409892 LRP2P98164 4655 aa7.11□□□□□ -1.27
RAB1A-204ENST00000409892 MUC2Q02817 5179 aa7.05□□□□□ -1.28
RAB1A-204ENST00000409892 CRCT1Q9UGL9 99 aa7.03□□□□□ -1.28
RAB1A-204ENST00000409892 LCE2AQ5TA79 106 aaPredicted RBP6.98□□□□□ -1.29
RAB1A-204ENST00000409892 LCE2DQ5TA82 110 aaPredicted RBP6.95□□□□□ -1.3
RAB1A-204ENST00000409892 MUC17Q685J3 4493 aa6.9□□□□□ -1.3
RAB1A-204ENST00000409892 KRTAP19-2Q3LHN2 52 aa6.87□□□□□ -1.31
RAB1A-204ENST00000409892 KRTAP12-3P60328 96 aa6.87□□□□□ -1.31
RAB1A-204ENST00000409892 KRTAP10-5P60370 271 aa6.81□□□□□ -1.32
RAB1A-204ENST00000409892 KRTAP9-7A8MTY7 169 aa6.76□□□□□ -1.33
RAB1A-204ENST00000409892 KRTAP4-1Q9BYQ7 146 aa6.73□□□□□ -1.33
RAB1A-204ENST00000409892 SPRR2GQ9BYE4 73 aa6.71□□□□□ -1.33
RAB1A-204ENST00000409892 KRTAP2-3P0C7H8 128 aa6.71□□□□□ -1.34
RAB1A-204ENST00000409892 KRTAP2-4Q9BYR9 128 aa6.71□□□□□ -1.34
RAB1A-204ENST00000409892 KRTAP2-1Q9BYU5 128 aa6.71□□□□□ -1.34
RAB1A-204ENST00000409892 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.59□□□□□ -1.35
RAB1A-204ENST00000409892 LCE3CQ5T5A8 94 aa6.56□□□□□ -1.36
RAB1A-204ENST00000409892 KRTAP19-1Q8IUB9 90 aa6.55□□□□□ -1.36
RAB1A-204ENST00000409892 FSIP2Q5CZC0 6907 aa6.54□□□□□ -1.36
RAB1A-204ENST00000409892 KRTAP10-7P60409 375 aaPredicted RBP6.43□□□□□ -1.38
RAB1A-204ENST00000409892 KRTAP9-6A8MVA2 160 aa6.37□□□□□ -1.39
RAB1A-204ENST00000409892 M0R2T5 61 aa6.37□□□□□ -1.39
RAB1A-204ENST00000409892 LCE2CQ5TA81 110 aa6.36□□□□□ -1.39
RAB1A-204ENST00000409892 MT1XP80297 61 aa6.29□□□□□ -1.4
RAB1A-204ENST00000409892 SSPOA2VEC9 5147 aa6.24□□□□□ -1.41
RAB1A-204ENST00000409892 KRTAP19-8Q3LI54 63 aa6.23□□□□□ -1.41
RAB1A-204ENST00000409892 MT1HP80294 61 aa6.2□□□□□ -1.42
RAB1A-204ENST00000409892 KRTAP19-5Q3LI72 72 aa6.17□□□□□ -1.42
RAB1A-204ENST00000409892 KRTAP2-2Q9BYT5 123 aa6.12□□□□□ -1.43
RAB1A-204ENST00000409892 KRTAP12-4P60329 112 aa6.11□□□□□ -1.43
RAB1A-204ENST00000409892 MT1BP07438 61 aa6.04□□□□□ -1.44
RAB1A-204ENST00000409892 KRTAP19-4Q3LI73 84 aa6□□□□□ -1.45
RAB1A-204ENST00000409892 FCGBPQ9Y6R7 5405 aaPredicted RBP5.99□□□□□ -1.45
RAB1A-204ENST00000409892 USH2AO75445 5202 aa5.97□□□□□ -1.45
RAB1A-204ENST00000409892 KRTAP9-8Q9BYQ0 159 aa5.97□□□□□ -1.45
RAB1A-204ENST00000409892 KRTAP6-3Q3LI67 103 aa5.95□□□□□ -1.46
RAB1A-204ENST00000409892 MT1FP04733 61 aa5.93□□□□□ -1.46
RAB1A-204ENST00000409892 MT2AP02795 61 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms