RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 NEBP20929 6669 aa6.51□□□□□ -1.37
CBX3-203ENST00000409747 ACYP1P07311 99 aa6.48□□□□□ -1.37
CBX3-203ENST00000409747 IMUPQ9GZP8 106 aa6.48□□□□□ -1.37
CBX3-203ENST00000409747 ATP5EP2Q5VTU8 51 aa6.47□□□□□ -1.37
CBX3-203ENST00000409747 MUC12Q9UKN1 5478 aa6.46□□□□□ -1.37
CBX3-203ENST00000409747 A0A087WVE0 104 aa6.46□□□□□ -1.38
CBX3-203ENST00000409747 ATOX1O00244 68 aa6.46□□□□□ -1.38
CBX3-203ENST00000409747 UQCRQO14949 82 aa6.45□□□□□ -1.38
CBX3-203ENST00000409747 NDUFC1O43677 76 aa6.45□□□□□ -1.38
CBX3-203ENST00000409747 FAM240AA0A1B0GVK7 77 aa6.43□□□□□ -1.38
CBX3-203ENST00000409747 H0YAA0 97 aa6.43□□□□□ -1.38
CBX3-203ENST00000409747 H0Y9P7 68 aa6.42□□□□□ -1.38
CBX3-203ENST00000409747 HIST1H4AP62805 103 aaKnown RBP6.42□□□□□ -1.38
CBX3-203ENST00000409747 A8MUN3 132 aa6.39□□□□□ -1.39
CBX3-203ENST00000409747 PCP4L1A6NKN8 68 aa6.39□□□□□ -1.39
CBX3-203ENST00000409747 KRTAP5-9P26371 169 aa6.39□□□□□ -1.39
CBX3-203ENST00000409747 KRTAP20-1Q3LI63 56 aa6.32□□□□□ -1.4
CBX3-203ENST00000409747 ADM2Q7Z4H4 148 aa6.32□□□□□ -1.4
CBX3-203ENST00000409747 SVIPQ8NHG7 77 aa6.32□□□□□ -1.4
CBX3-203ENST00000409747 KMT2DO14686 5537 aa6.31□□□□□ -1.4
CBX3-203ENST00000409747 LINC00643Q86TS7 51 aa6.3□□□□□ -1.4
CBX3-203ENST00000409747 PRO2289Q9P1D8 64 aa6.3□□□□□ -1.4
CBX3-203ENST00000409747 MDN1Q9NU22 5596 aa6.29□□□□□ -1.4
CBX3-203ENST00000409747 LINC00208Q96KT6 92 aa6.29□□□□□ -1.4
CBX3-203ENST00000409747 MP68P56378 58 aa6.28□□□□□ -1.4
CBX3-203ENST00000409747 PLAC4Q8WY50 150 aa6.23□□□□□ -1.41
CBX3-203ENST00000409747 C20orf197Q8N268 126 aa6.22□□□□□ -1.41
CBX3-203ENST00000409747 OCR1Q9BZK8 76 aa6.22□□□□□ -1.41
CBX3-203ENST00000409747 H3BS24 57 aa6.21□□□□□ -1.42
CBX3-203ENST00000409747 R4GN34 69 aa6.21□□□□□ -1.42
CBX3-203ENST00000409747 MT1XP80297 61 aa6.19□□□□□ -1.42
CBX3-203ENST00000409747 H3BPC8 53 aa6.17□□□□□ -1.42
CBX3-203ENST00000409747 SPRR2FQ96RM1 72 aa6.16□□□□□ -1.42
CBX3-203ENST00000409747 M0QZ58 72 aa6.13□□□□□ -1.43
CBX3-203ENST00000409747 P0C880 135 aa6.13□□□□□ -1.43
CBX3-203ENST00000409747 DMAC1Q96GE9 116 aa6.13□□□□□ -1.43
CBX3-203ENST00000409747 KRTAP4-8Q9BYQ9 185 aa6.13□□□□□ -1.43
CBX3-203ENST00000409747 KRTAP2-3P0C7H8 128 aa6.11□□□□□ -1.43
CBX3-203ENST00000409747 SPRR2EP22531 72 aa6.11□□□□□ -1.43
CBX3-203ENST00000409747 SPRR2BP35325 72 aa6.11□□□□□ -1.43
CBX3-203ENST00000409747 SPRR2AP35326 72 aa6.11□□□□□ -1.43
CBX3-203ENST00000409747 KRTAP8-1Q8IUC2 63 aa6.11□□□□□ -1.43
CBX3-203ENST00000409747 KRTAP2-4Q9BYR9 128 aa6.11□□□□□ -1.43
CBX3-203ENST00000409747 KRTAP12-2P59991 146 aa6.11□□□□□ -1.43
CBX3-203ENST00000409747 SCGB1A1P11684 91 aa6.08□□□□□ -1.44
CBX3-203ENST00000409747 J3QR89 54 aa6.06□□□□□ -1.44
CBX3-203ENST00000409747 LINC01554Q52M75 96 aa6.04□□□□□ -1.44
CBX3-203ENST00000409747 TRAV7A0A075B6U4 112 aa6.02□□□□□ -1.45
CBX3-203ENST00000409747 A0A1B0GV90 55 aa6.01□□□□□ -1.45
CBX3-203ENST00000409747 LCE1AQ5T7P2 110 aa5.99□□□□□ -1.45
CBX3-203ENST00000409747 ACYP2P14621 99 aa5.97□□□□□ -1.45
CBX3-203ENST00000409747 SPTSSBQ8NFR3 76 aa5.96□□□□□ -1.45
CBX3-203ENST00000409747 KRTAP4-8A0A0G2JLE6 195 aa5.94□□□□□ -1.46
CBX3-203ENST00000409747 MT-ATP8P03928 68 aa5.94□□□□□ -1.46
CBX3-203ENST00000409747 KRTAP2-2Q9BYT5 123 aa5.92□□□□□ -1.46
CBX3-203ENST00000409747 KRTAP2-1Q9BYU5 128 aa5.92□□□□□ -1.46
CBX3-203ENST00000409747 SPRR2DP22532 72 aa5.91□□□□□ -1.46
CBX3-203ENST00000409747 KRTAP10-7P60409 375 aaPredicted RBP5.89□□□□□ -1.47
CBX3-203ENST00000409747 KRTAP10-12P60413 245 aa5.89□□□□□ -1.47
CBX3-203ENST00000409747 SMIM20Q8N5G0 67 aa5.89□□□□□ -1.47
CBX3-203ENST00000409747 CHKB-CPT1BH3BT56 60 aa5.88□□□□□ -1.47
CBX3-203ENST00000409747 LCE3BQ5TA77 95 aa5.83□□□□□ -1.48
CBX3-203ENST00000409747 KRTAP4-12Q9BQ66 201 aa5.77□□□□□ -1.49
CBX3-203ENST00000409747 K7ERU9 68 aa5.74□□□□□ -1.49
CBX3-203ENST00000409747 KRTAP9-9Q9BYP9 154 aa5.73□□□□□ -1.49
CBX3-203ENST00000409747 KRTAP9-4Q9BYQ2 154 aa5.73□□□□□ -1.49
CBX3-203ENST00000409747 SNURFQ9Y675 71 aa5.73□□□□□ -1.49
CBX3-203ENST00000409747 SPANXA2-OT1Q8N9U9 137 aa5.72□□□□□ -1.49
CBX3-203ENST00000409747 CAMK2N1Q7Z7J9 78 aa5.69□□□□□ -1.5
CBX3-203ENST00000409747 KRTAP13-4Q3LI77 160 aa5.66□□□□□ -1.5
CBX3-203ENST00000409747 SERP2Q8N6R1 65 aa5.6□□□□□ -1.51
CBX3-203ENST00000409747 SEC61GP60059 68 aa5.57□□□□□ -1.52
CBX3-203ENST00000409747 COA5Q86WW8 74 aa5.55□□□□□ -1.52
CBX3-203ENST00000409747 SERP1Q9Y6X1 66 aa5.54□□□□□ -1.52
CBX3-203ENST00000409747 KRTAP19-7Q3SYF9 63 aa5.53□□□□□ -1.52
CBX3-203ENST00000409747 LCE5AQ5TCM9 118 aa5.52□□□□□ -1.53
CBX3-203ENST00000409747 A0A0D9SG42 100 aa5.5□□□□□ -1.53
CBX3-203ENST00000409747 MT1EP04732 61 aa5.5□□□□□ -1.53
CBX3-203ENST00000409747 KRTAP19-3Q7Z4W3 81 aa5.5□□□□□ -1.53
CBX3-203ENST00000409747 KRTAP4-7Q9BYR0 210 aa5.5□□□□□ -1.53
CBX3-203ENST00000409747 LCE1DQ5T752 114 aa5.45□□□□□ -1.54
CBX3-203ENST00000409747 DSTQ03001 7570 aaKnown RBP5.45□□□□□ -1.54
CBX3-203ENST00000409747 SPATA8Q6RVD6 105 aa5.45□□□□□ -1.54
CBX3-203ENST00000409747 SPINT4Q6UDR6 99 aa5.45□□□□□ -1.54
CBX3-203ENST00000409747 A0A1B0GU33 70 aa5.44□□□□□ -1.54
CBX3-203ENST00000409747 PCP4P48539 62 aa5.4□□□□□ -1.54
CBX3-203ENST00000409747 CYSTM1Q9H1C7 97 aa5.39□□□□□ -1.55
CBX3-203ENST00000409747 COX7CP15954 63 aa5.38□□□□□ -1.55
CBX3-203ENST00000409747 KRTAP12-1P59990 96 aa5.38□□□□□ -1.55
CBX3-203ENST00000409747 MT1GP13640 62 aa5.36□□□□□ -1.55
CBX3-203ENST00000409747 KRTAP19-5Q3LI72 72 aa5.36□□□□□ -1.55
CBX3-203ENST00000409747 PP632Q6XCG6 107 aa5.36□□□□□ -1.55
CBX3-203ENST00000409747 GPR98Q8WXG9 6306 aa5.36□□□□□ -1.55
CBX3-203ENST00000409747 KRTAP4-9Q9BYQ8 210 aa5.35□□□□□ -1.55
CBX3-203ENST00000409747 H7BZZ5 65 aa5.33□□□□□ -1.56
CBX3-203ENST00000409747 SMIM26A0A096LP01 95 aa5.32□□□□□ -1.56
CBX3-203ENST00000409747 A0A1B0GU69 56 aa5.3□□□□□ -1.56
CBX3-203ENST00000409747 KRTAP4-2Q9BYR5 136 aa5.27□□□□□ -1.57
CBX3-203ENST00000409747 MT1MQ8N339 61 aa5.25□□□□□ -1.57
CBX3-203ENST00000409747 KRTAP23-1A1A580 65 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms