RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 C5orf47Q569G3 176 aa6.71□□□□□ -1.34
NIF3L1-205ENST00000409588 KRTAP23-1A1A580 65 aa6.69□□□□□ -1.34
NIF3L1-205ENST00000409588 FAM236AA0A1B0GUQ0 79 aa6.67□□□□□ -1.34
NIF3L1-205ENST00000409588 FAM236BA0A1B0GV22 79 aa6.67□□□□□ -1.34
NIF3L1-205ENST00000409588 PCP4L1A6NKN8 68 aa6.67□□□□□ -1.34
NIF3L1-205ENST00000409588 CYP4F30PQ9H0H9 118 aa6.67□□□□□ -1.34
NIF3L1-205ENST00000409588 MACF1Q9UPN3 7388 aaKnown RBP6.66□□□□□ -1.34
NIF3L1-205ENST00000409588 FAM240AA0A1B0GVK7 77 aa6.66□□□□□ -1.34
NIF3L1-205ENST00000409588 ATP5EP2Q5VTU8 51 aa6.66□□□□□ -1.34
NIF3L1-205ENST00000409588 LCA10Q71F78 164 aa6.66□□□□□ -1.34
NIF3L1-205ENST00000409588 TRAV22A0A0B4J277 110 aa6.64□□□□□ -1.35
NIF3L1-205ENST00000409588 LOC101927531A0A1B0GV80 90 aa6.64□□□□□ -1.35
NIF3L1-205ENST00000409588 ATOX1O00244 68 aa6.6□□□□□ -1.35
NIF3L1-205ENST00000409588 UQCRQO14949 82 aa6.59□□□□□ -1.35
NIF3L1-205ENST00000409588 SPRR2GQ9BYE4 73 aa6.59□□□□□ -1.35
NIF3L1-205ENST00000409588 SYNE2Q8WXH0 6885 aaKnown RBP6.57□□□□□ -1.36
NIF3L1-205ENST00000409588 HIST1H4AP62805 103 aaKnown RBP6.56□□□□□ -1.36
NIF3L1-205ENST00000409588 KLKP1Q107X0 134 aa6.56□□□□□ -1.36
NIF3L1-205ENST00000409588 Q5VV11 94 aa6.56□□□□□ -1.36
NIF3L1-205ENST00000409588 CRIPTQ9P021 101 aa6.56□□□□□ -1.36
NIF3L1-205ENST00000409588 KRTAP19-8Q3LI54 63 aa6.54□□□□□ -1.36
NIF3L1-205ENST00000409588 KRTAP6-3Q3LI67 103 aa6.52□□□□□ -1.37
NIF3L1-205ENST00000409588 LINC00643Q86TS7 51 aa6.52□□□□□ -1.37
NIF3L1-205ENST00000409588 IMUPQ9GZP8 106 aa6.52□□□□□ -1.37
NIF3L1-205ENST00000409588 A8MUN3 132 aa6.5□□□□□ -1.37
NIF3L1-205ENST00000409588 H0Y9P7 68 aa6.5□□□□□ -1.37
NIF3L1-205ENST00000409588 NDUFC1O43677 76 aa6.5□□□□□ -1.37
NIF3L1-205ENST00000409588 A6NN06 94 aa6.49□□□□□ -1.37
NIF3L1-205ENST00000409588 MT1BP07438 61 aa6.48□□□□□ -1.37
NIF3L1-205ENST00000409588 H0YAA0 97 aa6.47□□□□□ -1.37
NIF3L1-205ENST00000409588 A0A087WVE0 104 aa6.43□□□□□ -1.38
NIF3L1-205ENST00000409588 MP68P56378 58 aa6.43□□□□□ -1.38
NIF3L1-205ENST00000409588 LINC00208Q96KT6 92 aa6.41□□□□□ -1.38
NIF3L1-205ENST00000409588 KRTAP10-5P60370 271 aa6.4□□□□□ -1.38
NIF3L1-205ENST00000409588 OCR1Q9BZK8 76 aa6.38□□□□□ -1.39
NIF3L1-205ENST00000409588 H3BPC8 53 aa6.37□□□□□ -1.39
NIF3L1-205ENST00000409588 J3QR89 54 aa6.37□□□□□ -1.39
NIF3L1-205ENST00000409588 A0A1B0GV90 55 aa6.3□□□□□ -1.4
NIF3L1-205ENST00000409588 ADM2Q7Z4H4 148 aa6.3□□□□□ -1.4
NIF3L1-205ENST00000409588 SVIPQ8NHG7 77 aa6.29□□□□□ -1.4
NIF3L1-205ENST00000409588 SCGB1A1P11684 91 aa6.28□□□□□ -1.4
NIF3L1-205ENST00000409588 LCE1AQ5T7P2 110 aa6.27□□□□□ -1.41
NIF3L1-205ENST00000409588 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.27□□□□□ -1.41
NIF3L1-205ENST00000409588 C20orf197Q8N268 126 aa6.27□□□□□ -1.41
NIF3L1-205ENST00000409588 PRO2289Q9P1D8 64 aa6.24□□□□□ -1.41
NIF3L1-205ENST00000409588 DMAC1Q96GE9 116 aa6.23□□□□□ -1.41
NIF3L1-205ENST00000409588 PLAC4Q8WY50 150 aa6.21□□□□□ -1.42
NIF3L1-205ENST00000409588 KRTAP5-9P26371 169 aa6.2□□□□□ -1.42
NIF3L1-205ENST00000409588 R4GN34 69 aa6.2□□□□□ -1.42
NIF3L1-205ENST00000409588 KRTAP10-7P60409 375 aaPredicted RBP6.18□□□□□ -1.42
NIF3L1-205ENST00000409588 NEBP20929 6669 aa6.16□□□□□ -1.42
NIF3L1-205ENST00000409588 TRAV7A0A075B6U4 112 aa6.16□□□□□ -1.42
NIF3L1-205ENST00000409588 MUC12Q9UKN1 5478 aa6.16□□□□□ -1.42
NIF3L1-205ENST00000409588 KRTAP5-11Q6L8G4 156 aa6.15□□□□□ -1.42
NIF3L1-205ENST00000409588 SMIM20Q8N5G0 67 aa6.15□□□□□ -1.42
NIF3L1-205ENST00000409588 ACYP2P14621 99 aa6.13□□□□□ -1.43
NIF3L1-205ENST00000409588 P0C880 135 aa6.12□□□□□ -1.43
NIF3L1-205ENST00000409588 SPTSSBQ8NFR3 76 aa6.11□□□□□ -1.43
NIF3L1-205ENST00000409588 M0QZ58 72 aa6.1□□□□□ -1.43
NIF3L1-205ENST00000409588 MT1XP80297 61 aa6.08□□□□□ -1.44
NIF3L1-205ENST00000409588 K7ERU9 68 aa6.07□□□□□ -1.44
NIF3L1-205ENST00000409588 KMT2DO14686 5537 aa6.07□□□□□ -1.44
NIF3L1-205ENST00000409588 KRTAP12-2P59991 146 aa6.03□□□□□ -1.44
NIF3L1-205ENST00000409588 KRTAP20-1Q3LI63 56 aa6.02□□□□□ -1.45
NIF3L1-205ENST00000409588 MDN1Q9NU22 5596 aa6.01□□□□□ -1.45
NIF3L1-205ENST00000409588 MT-ATP8P03928 68 aa6.01□□□□□ -1.45
NIF3L1-205ENST00000409588 LINC01554Q52M75 96 aa5.99□□□□□ -1.45
NIF3L1-205ENST00000409588 CHKB-CPT1BH3BT56 60 aa5.97□□□□□ -1.45
NIF3L1-205ENST00000409588 KRTAP8-1Q8IUC2 63 aa5.96□□□□□ -1.46
NIF3L1-205ENST00000409588 SPRR2FQ96RM1 72 aa5.96□□□□□ -1.46
NIF3L1-205ENST00000409588 SPANXA2-OT1Q8N9U9 137 aa5.93□□□□□ -1.46
NIF3L1-205ENST00000409588 KRTAP2-2Q9BYT5 123 aa5.92□□□□□ -1.46
NIF3L1-205ENST00000409588 KRTAP2-3P0C7H8 128 aa5.91□□□□□ -1.46
NIF3L1-205ENST00000409588 KRTAP2-4Q9BYR9 128 aa5.91□□□□□ -1.46
NIF3L1-205ENST00000409588 SPRR2EP22531 72 aa5.88□□□□□ -1.47
NIF3L1-205ENST00000409588 SPRR2BP35325 72 aa5.88□□□□□ -1.47
NIF3L1-205ENST00000409588 SPRR2AP35326 72 aa5.88□□□□□ -1.47
NIF3L1-205ENST00000409588 SNURFQ9Y675 71 aa5.88□□□□□ -1.47
NIF3L1-205ENST00000409588 SERP2Q8N6R1 65 aa5.85□□□□□ -1.47
NIF3L1-205ENST00000409588 KRTAP10-12P60413 245 aa5.82□□□□□ -1.48
NIF3L1-205ENST00000409588 LCE1EQ5T753 118 aa5.75□□□□□ -1.49
NIF3L1-205ENST00000409588 SEC61GP60059 68 aa5.72□□□□□ -1.49
NIF3L1-205ENST00000409588 KRTAP2-1Q9BYU5 128 aa5.72□□□□□ -1.49
NIF3L1-205ENST00000409588 SPRR2DP22532 72 aa5.7□□□□□ -1.5
NIF3L1-205ENST00000409588 CAMK2N1Q7Z7J9 78 aa5.69□□□□□ -1.5
NIF3L1-205ENST00000409588 SERP1Q9Y6X1 66 aa5.69□□□□□ -1.5
NIF3L1-205ENST00000409588 COA5Q86WW8 74 aa5.68□□□□□ -1.5
NIF3L1-205ENST00000409588 KRTAP13-4Q3LI77 160 aa5.66□□□□□ -1.5
NIF3L1-205ENST00000409588 COX7CP15954 63 aa5.65□□□□□ -1.5
NIF3L1-205ENST00000409588 A0A1B0GU33 70 aa5.57□□□□□ -1.52
NIF3L1-205ENST00000409588 H7BZZ5 65 aa5.55□□□□□ -1.52
NIF3L1-205ENST00000409588 A0A0D9SG42 100 aa5.51□□□□□ -1.53
NIF3L1-205ENST00000409588 SPATA8Q6RVD6 105 aa5.5□□□□□ -1.53
NIF3L1-205ENST00000409588 SPINT4Q6UDR6 99 aa5.48□□□□□ -1.53
NIF3L1-205ENST00000409588 SMIM26A0A096LP01 95 aa5.45□□□□□ -1.54
NIF3L1-205ENST00000409588 A0A1B0GU69 56 aa5.45□□□□□ -1.54
NIF3L1-205ENST00000409588 KRTAP19-7Q3SYF9 63 aa5.44□□□□□ -1.54
NIF3L1-205ENST00000409588 KRTAP12-1P59990 96 aa5.43□□□□□ -1.54
NIF3L1-205ENST00000409588 KRTAP5-1Q6L8H4 278 aa5.43□□□□□ -1.54
NIF3L1-205ENST00000409588 CYSTM1Q9H1C7 97 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms