RNA–Protein interactions for RNA: ENST00000409532.5

ITGA6-203, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 3,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-203ENST00000409532 CRIPTQ9P021 101 aa5.85□□□□□ -1.47
ITGA6-203ENST00000409532 FAT3Q8TDW7 4589 aa5.84□□□□□ -1.47
ITGA6-203ENST00000409532 KRTAP10-8P60410 259 aa5.82□□□□□ -1.48
ITGA6-203ENST00000409532 A0A0D9SG42 100 aa5.8□□□□□ -1.48
ITGA6-203ENST00000409532 XP32Q5T750 250 aa5.78□□□□□ -1.48
ITGA6-203ENST00000409532 TNXBP22105 4242 aa5.78□□□□□ -1.48
ITGA6-203ENST00000409532 KRTAP17-1Q9BYP8 105 aa5.78□□□□□ -1.48
ITGA6-203ENST00000409532 RPL37P61927 97 aaKnown RBP5.77□□□□□ -1.49
ITGA6-203ENST00000409532 KRTAP3-3Q9BYR6 98 aa5.77□□□□□ -1.49
ITGA6-203ENST00000409532 K7ERS5 55 aa5.75□□□□□ -1.49
ITGA6-203ENST00000409532 KIAA1109Q2LD37 5005 aa5.74□□□□□ -1.49
ITGA6-203ENST00000409532 KRTAP13-4Q3LI77 160 aa5.74□□□□□ -1.49
ITGA6-203ENST00000409532 EPPK1P58107 5090 aaKnown RBP5.73□□□□□ -1.49
ITGA6-203ENST00000409532 KRTAP10-6P60371 365 aaPredicted RBP5.73□□□□□ -1.49
ITGA6-203ENST00000409532 S4R3F8 94 aa5.73□□□□□ -1.49
ITGA6-203ENST00000409532 KRTAP25-1Q3LHN0 102 aa5.7□□□□□ -1.5
ITGA6-203ENST00000409532 P0C880 135 aa5.7□□□□□ -1.5
ITGA6-203ENST00000409532 LPAP08519 4548 aa5.7□□□□□ -1.5
ITGA6-203ENST00000409532 KRTAP3-2Q9BYR7 98 aa5.68□□□□□ -1.5
ITGA6-203ENST00000409532 LRP2P98164 4655 aa5.66□□□□□ -1.5
ITGA6-203ENST00000409532 RYR1P21817 5038 aa5.66□□□□□ -1.5
ITGA6-203ENST00000409532 MT1HL1P0DM35 61 aa5.64□□□□□ -1.51
ITGA6-203ENST00000409532 ROMO1P60602 79 aa5.61□□□□□ -1.51
ITGA6-203ENST00000409532 SPINT4Q6UDR6 99 aa5.58□□□□□ -1.52
ITGA6-203ENST00000409532 C10orf95Q9H7T3 257 aa5.56□□□□□ -1.52
ITGA6-203ENST00000409532 KRTAP12-2P59991 146 aa5.55□□□□□ -1.52
ITGA6-203ENST00000409532 ABCA13Q86UQ4 5058 aa5.52□□□□□ -1.53
ITGA6-203ENST00000409532 TPRXLQ17RH7 258 aa5.51□□□□□ -1.53
ITGA6-203ENST00000409532 KRTAP4-5Q9BYR2 181 aa5.5□□□□□ -1.53
ITGA6-203ENST00000409532 KRTAP12-1P59990 96 aa5.47□□□□□ -1.53
ITGA6-203ENST00000409532 LCE2DQ5TA82 110 aaPredicted RBP5.44□□□□□ -1.54
ITGA6-203ENST00000409532 H3BS24 57 aa5.44□□□□□ -1.54
ITGA6-203ENST00000409532 M0QZ58 72 aa5.41□□□□□ -1.54
ITGA6-203ENST00000409532 R4GN34 69 aa5.37□□□□□ -1.55
ITGA6-203ENST00000409532 LORP23490 312 aaPredicted RBP5.34□□□□□ -1.56
ITGA6-203ENST00000409532 KRTAP4-1Q9BYQ7 146 aa5.33□□□□□ -1.56
ITGA6-203ENST00000409532 J3QL48 77 aa5.32□□□□□ -1.56
ITGA6-203ENST00000409532 PCLOQ9Y6V0 5065 aa5.31□□□□□ -1.56
ITGA6-203ENST00000409532 HERC2O95714 4834 aa5.31□□□□□ -1.56
ITGA6-203ENST00000409532 SEC61BP60468 96 aaKnown RBP5.31□□□□□ -1.56
ITGA6-203ENST00000409532 MUC2Q02817 5179 aa5.28□□□□□ -1.56
ITGA6-203ENST00000409532 HERC1Q15751 4861 aa5.26□□□□□ -1.57
ITGA6-203ENST00000409532 MUC17Q685J3 4493 aa5.26□□□□□ -1.57
ITGA6-203ENST00000409532 BIRC6Q9NR09 4857 aa5.25□□□□□ -1.57
ITGA6-203ENST00000409532 NDUFAF8A1L188 74 aa5.19□□□□□ -1.58
ITGA6-203ENST00000409532 KRTAP15-1Q3LI76 137 aa5.18□□□□□ -1.58
ITGA6-203ENST00000409532 CAMK2N1Q7Z7J9 78 aa5.13□□□□□ -1.59
ITGA6-203ENST00000409532 KRTAP19-2Q3LHN2 52 aa5.12□□□□□ -1.59
ITGA6-203ENST00000409532 RNF213Q63HN8 5207 aa5.08□□□□□ -1.6
ITGA6-203ENST00000409532 UBR4Q5T4S7 5183 aa5.03□□□□□ -1.6
ITGA6-203ENST00000409532 FAT4Q6V0I7 4981 aa5.02□□□□□ -1.61
ITGA6-203ENST00000409532 PLAC4Q8WY50 150 aa5.01□□□□□ -1.61
ITGA6-203ENST00000409532 FLGP20930 4061 aaPredicted RBP4.96□□□□□ -1.62
ITGA6-203ENST00000409532 M0R2T5 61 aa4.89□□□□□ -1.63
ITGA6-203ENST00000409532 HMCN2Q8NDA2 5059 aa4.87□□□□□ -1.63
ITGA6-203ENST00000409532 PP632Q6XCG6 107 aa4.86□□□□□ -1.63
ITGA6-203ENST00000409532 TNP1P09430 55 aa4.86□□□□□ -1.63
ITGA6-203ENST00000409532 LCE2CQ5TA81 110 aa4.84□□□□□ -1.64
ITGA6-203ENST00000409532 LUZP6Q538Z0 58 aa4.79□□□□□ -1.64
ITGA6-203ENST00000409532 KRTAP19-1Q8IUB9 90 aa4.76□□□□□ -1.65
ITGA6-203ENST00000409532 KRTAP10-10P60014 251 aa4.74□□□□□ -1.65
ITGA6-203ENST00000409532 MT1HP80294 61 aa4.72□□□□□ -1.65
ITGA6-203ENST00000409532 LCE2BO14633 110 aa4.72□□□□□ -1.65
ITGA6-203ENST00000409532 SPRR2GQ9BYE4 73 aa4.72□□□□□ -1.65
ITGA6-203ENST00000409532 MT1FP04733 61 aa4.69□□□□□ -1.66
ITGA6-203ENST00000409532 MT2AP02795 61 aa4.67□□□□□ -1.66
ITGA6-203ENST00000409532 LCE3AQ5TA76 89 aa4.64□□□□□ -1.67
ITGA6-203ENST00000409532 KRTAP9-8Q9BYQ0 159 aa4.61□□□□□ -1.67
ITGA6-203ENST00000409532 KRTAP23-1A1A580 65 aa4.6□□□□□ -1.67
ITGA6-203ENST00000409532 FSIP2Q5CZC0 6907 aa4.53□□□□□ -1.68
ITGA6-203ENST00000409532 SPRR5A0A1B0GTR4 108 aa4.52□□□□□ -1.69
ITGA6-203ENST00000409532 A0A0A0MQY5 61 aa4.52□□□□□ -1.69
ITGA6-203ENST00000409532 MT1BP07438 61 aa4.51□□□□□ -1.69
ITGA6-203ENST00000409532 KRTAP10-5P60370 271 aa4.49□□□□□ -1.69
ITGA6-203ENST00000409532 LCE2AQ5TA79 106 aaPredicted RBP4.49□□□□□ -1.69
ITGA6-203ENST00000409532 MT1XP80297 61 aa4.49□□□□□ -1.69
ITGA6-203ENST00000409532 KRTAP19-8Q3LI54 63 aa4.48□□□□□ -1.69
ITGA6-203ENST00000409532 KRTAP10-7P60409 375 aaPredicted RBP4.42□□□□□ -1.7
ITGA6-203ENST00000409532 KRTAP10-12P60413 245 aa4.42□□□□□ -1.7
ITGA6-203ENST00000409532 KRTAP8-1Q8IUC2 63 aa4.42□□□□□ -1.7
ITGA6-203ENST00000409532 USH2AO75445 5202 aa4.4□□□□□ -1.7
ITGA6-203ENST00000409532 KRTAP9-3Q9BYQ3 159 aa4.4□□□□□ -1.71
ITGA6-203ENST00000409532 KRTAP12-3P60328 96 aa4.39□□□□□ -1.71
ITGA6-203ENST00000409532 KMT2DO14686 5537 aa4.33□□□□□ -1.72
ITGA6-203ENST00000409532 PRO2289Q9P1D8 64 aa4.28□□□□□ -1.72
ITGA6-203ENST00000409532 KRTAP19-5Q3LI72 72 aa4.23□□□□□ -1.73
ITGA6-203ENST00000409532 KRTAP4-8A0A0G2JLE6 195 aa4.21□□□□□ -1.74
ITGA6-203ENST00000409532 KRTAP4-8Q9BYQ9 185 aa4.21□□□□□ -1.74
ITGA6-203ENST00000409532 LCE3CQ5T5A8 94 aa4.11□□□□□ -1.75
ITGA6-203ENST00000409532 KRTAP4-7Q9BYR0 210 aa4.06□□□□□ -1.76
ITGA6-203ENST00000409532 KRTAP9-6A8MVA2 160 aa4.02□□□□□ -1.77
ITGA6-203ENST00000409532 KRTAP19-7Q3SYF9 63 aa3.99□□□□□ -1.77
ITGA6-203ENST00000409532 INE1O15225 51 aa3.99□□□□□ -1.77
ITGA6-203ENST00000409532 SSPOA2VEC9 5147 aa3.98□□□□□ -1.77
ITGA6-203ENST00000409532 MT1LQ93083 61 aa3.87□□□□□ -1.79
ITGA6-203ENST00000409532 MT1EP04732 61 aa3.86□□□□□ -1.79
ITGA6-203ENST00000409532 MUC12Q9UKN1 5478 aa3.8□□□□□ -1.8
ITGA6-203ENST00000409532 FCGBPQ9Y6R7 5405 aaPredicted RBP3.8□□□□□ -1.8
ITGA6-203ENST00000409532 SYNE2Q8WXH0 6885 aaKnown RBP3.8□□□□□ -1.8
ITGA6-203ENST00000409532 KRTAP4-3Q9BYR4 195 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms