RNA–Protein interactions for RNA: ENST00000409298.5

GTDC1-207, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 5 BASIC

Gene GTDC1, Length 2,209 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-207ENST00000409298 KRTAP3-1Q9BYR8 98 aa3.18□□□□□ -1.9
GTDC1-207ENST00000409298 KRTAP13-4Q3LI77 160 aa3.17□□□□□ -1.9
GTDC1-207ENST00000409298 KRTAP10-3P60369 221 aa3.17□□□□□ -1.9
GTDC1-207ENST00000409298 DNAH17Q9UFH2 4485 aa3.17□□□□□ -1.9
GTDC1-207ENST00000409298 KRTAP23-1A1A580 65 aa3.16□□□□□ -1.9
GTDC1-207ENST00000409298 A0A0D9SG42 100 aa3.15□□□□□ -1.91
GTDC1-207ENST00000409298 S4R3F8 94 aa3.15□□□□□ -1.91
GTDC1-207ENST00000409298 PLAC4Q8WY50 150 aa3.14□□□□□ -1.91
GTDC1-207ENST00000409298 PRKDCP78527 4128 aaKnown RBP3.14□□□□□ -1.91
GTDC1-207ENST00000409298 KMT2CQ8NEZ4 4911 aaKnown RBP3.13□□□□□ -1.91
GTDC1-207ENST00000409298 KRTAP10-6P60371 365 aaPredicted RBP3.13□□□□□ -1.91
GTDC1-207ENST00000409298 RYR3Q15413 4870 aa3.13□□□□□ -1.91
GTDC1-207ENST00000409298 DNAH9Q9NYC9 4486 aa3.12□□□□□ -1.91
GTDC1-207ENST00000409298 VPS13DQ5THJ4 4388 aa3.12□□□□□ -1.91
GTDC1-207ENST00000409298 TENM1Q9UKZ4 2725 aa3.12□□□□□ -1.91
GTDC1-207ENST00000409298 KRTAP1-5Q9BYS1 174 aa3.12□□□□□ -1.91
GTDC1-207ENST00000409298 APLNQ9ULZ1 77 aa3.11□□□□□ -1.91
GTDC1-207ENST00000409298 KRTAP12-2P59991 146 aa3.11□□□□□ -1.91
GTDC1-207ENST00000409298 TENM3Q9P273 2699 aa3.1□□□□□ -1.91
GTDC1-207ENST00000409298 SPACA4Q8TDM5 124 aa3.1□□□□□ -1.91
GTDC1-207ENST00000409298 PRO2289Q9P1D8 64 aa3.09□□□□□ -1.91
GTDC1-207ENST00000409298 DMBT1Q9UGM3 2413 aaPredicted RBP3.09□□□□□ -1.91
GTDC1-207ENST00000409298 Q6ZRN7 208 aaPredicted RBP3.07□□□□□ -1.92
GTDC1-207ENST00000409298 DYNC2H1Q8NCM8 4307 aaKnown RBP3.06□□□□□ -1.92
GTDC1-207ENST00000409298 KRTAP12-1P59990 96 aa3.05□□□□□ -1.92
GTDC1-207ENST00000409298 CMYA5Q8N3K9 4069 aa3.05□□□□□ -1.92
GTDC1-207ENST00000409298 DNAH3Q8TD57 4116 aa3.04□□□□□ -1.92
GTDC1-207ENST00000409298 STAB2Q8WWQ8 2551 aa3.03□□□□□ -1.92
GTDC1-207ENST00000409298 DNAH11Q96DT5 4516 aa3.03□□□□□ -1.92
GTDC1-207ENST00000409298 EPPK1P58107 5090 aaKnown RBP3.02□□□□□ -1.93
GTDC1-207ENST00000409298 KMT2AQ03164 3969 aa3.02□□□□□ -1.93
GTDC1-207ENST00000409298 KRTAP13-2Q52LG2 175 aa3.01□□□□□ -1.93
GTDC1-207ENST00000409298 PCLOQ9Y6V0 5065 aa3.01□□□□□ -1.93
GTDC1-207ENST00000409298 HERC2O95714 4834 aa3.01□□□□□ -1.93
GTDC1-207ENST00000409298 DNAH7Q8WXX0 4024 aa3□□□□□ -1.93
GTDC1-207ENST00000409298 DNAH6Q9C0G6 4158 aa3□□□□□ -1.93
GTDC1-207ENST00000409298 RYR2Q92736 4967 aa3□□□□□ -1.93
GTDC1-207ENST00000409298 HECTD4Q9Y4D8 3996 aa2.99□□□□□ -1.93
GTDC1-207ENST00000409298 KRTAP10-11P60412 298 aa2.98□□□□□ -1.93
GTDC1-207ENST00000409298 KRTAP10-8P60410 259 aa2.97□□□□□ -1.93
GTDC1-207ENST00000409298 UBE2DNLQ8IWF7 75 aa2.97□□□□□ -1.93
GTDC1-207ENST00000409298 RYR1P21817 5038 aa2.97□□□□□ -1.93
GTDC1-207ENST00000409298 HYDINQ4G0P3 5121 aa2.97□□□□□ -1.93
GTDC1-207ENST00000409298 MYCBP2O75592 4640 aa2.97□□□□□ -1.93
GTDC1-207ENST00000409298 HUWE1Q7Z6Z7 4374 aaKnown RBP2.96□□□□□ -1.94
GTDC1-207ENST00000409298 R4GN34 69 aa2.96□□□□□ -1.94
GTDC1-207ENST00000409298 DNAH2Q9P225 4427 aa2.94□□□□□ -1.94
GTDC1-207ENST00000409298 SACSQ9NZJ4 4579 aa2.92□□□□□ -1.94
GTDC1-207ENST00000409298 SPRR5A0A1B0GTR4 108 aa2.92□□□□□ -1.94
GTDC1-207ENST00000409298 INE1O15225 51 aa2.92□□□□□ -1.94
GTDC1-207ENST00000409298 KRTAP1-4P0C5Y4 121 aa2.89□□□□□ -1.95
GTDC1-207ENST00000409298 M0QZ58 72 aa2.88□□□□□ -1.95
GTDC1-207ENST00000409298 KRTAP5-4Q6L8H1 288 aa2.88□□□□□ -1.95
GTDC1-207ENST00000409298 PP632Q6XCG6 107 aa2.87□□□□□ -1.95
GTDC1-207ENST00000409298 PLECQ15149 4684 aaKnown RBP2.86□□□□□ -1.95
GTDC1-207ENST00000409298 APOBP04114 4563 aaKnown RBP2.86□□□□□ -1.95
GTDC1-207ENST00000409298 C9orf92A6NGG3 77 aa2.85□□□□□ -1.95
GTDC1-207ENST00000409298 RPS29P62273 56 aaKnown RBP2.85□□□□□ -1.95
GTDC1-207ENST00000409298 LRP1BQ9NZR2 4599 aa2.81□□□□□ -1.96
GTDC1-207ENST00000409298 DNAH5Q8TE73 4624 aa2.81□□□□□ -1.96
GTDC1-207ENST00000409298 KIAA1109Q2LD37 5005 aa2.77□□□□□ -1.97
GTDC1-207ENST00000409298 PKHD1L1Q86WI1 4243 aa2.77□□□□□ -1.97
GTDC1-207ENST00000409298 VPS13BQ7Z7G8 4022 aa2.77□□□□□ -1.97
GTDC1-207ENST00000409298 ABCA13Q86UQ4 5058 aa2.77□□□□□ -1.97
GTDC1-207ENST00000409298 PKHD1P08F94 4074 aa2.76□□□□□ -1.97
GTDC1-207ENST00000409298 UBR4Q5T4S7 5183 aa2.75□□□□□ -1.97
GTDC1-207ENST00000409298 LRP1Q07954 4544 aaKnown RBP2.74□□□□□ -1.97
GTDC1-207ENST00000409298 STARD9Q9P2P6 4700 aa2.73□□□□□ -1.97
GTDC1-207ENST00000409298 A0A1B0GVY2 172 aa2.72□□□□□ -1.97
GTDC1-207ENST00000409298 FAT2Q9NYQ8 4349 aa2.72□□□□□ -1.97
GTDC1-207ENST00000409298 HERC1Q15751 4861 aa2.71□□□□□ -1.98
GTDC1-207ENST00000409298 DYNC1H1Q14204 4646 aaKnown RBP2.68□□□□□ -1.98
GTDC1-207ENST00000409298 Q5VSD8 79 aa2.66□□□□□ -1.98
GTDC1-207ENST00000409298 TNXBP22105 4242 aa2.66□□□□□ -1.98
GTDC1-207ENST00000409298 KRTAP5-2Q701N4 177 aa2.66□□□□□ -1.98
GTDC1-207ENST00000409298 PKD1P98161 4303 aa2.66□□□□□ -1.98
GTDC1-207ENST00000409298 HSPG2P98160 4391 aa2.64□□□□□ -1.99
GTDC1-207ENST00000409298 KRTAP10-1P60331 282 aa2.63□□□□□ -1.99
GTDC1-207ENST00000409298 KRTAP4-4Q9BYR3 166 aa2.62□□□□□ -1.99
GTDC1-207ENST00000409298 FAT3Q8TDW7 4589 aa2.61□□□□□ -1.99
GTDC1-207ENST00000409298 KRTAP5-8O75690 187 aa2.6□□□□□ -1.99
GTDC1-207ENST00000409298 KRTAP5-1Q6L8H4 278 aa2.58□□□□□ -2
GTDC1-207ENST00000409298 TNP1P09430 55 aa2.57□□□□□ -2
GTDC1-207ENST00000409298 HMCN2Q8NDA2 5059 aa2.55□□□□□ -2
GTDC1-207ENST00000409298 LCE1AQ5T7P2 110 aa2.53□□□□□ -2
GTDC1-207ENST00000409298 RNF213Q63HN8 5207 aa2.52□□□□□ -2.01
GTDC1-207ENST00000409298 FAT1Q14517 4588 aa2.51□□□□□ -2.01
GTDC1-207ENST00000409298 LPAP08519 4548 aa2.49□□□□□ -2.01
GTDC1-207ENST00000409298 KRTAP10-10P60014 251 aa2.49□□□□□ -2.01
GTDC1-207ENST00000409298 FAT4Q6V0I7 4981 aa2.47□□□□□ -2.01
GTDC1-207ENST00000409298 FLGP20930 4061 aaPredicted RBP2.47□□□□□ -2.01
GTDC1-207ENST00000409298 KRTAP10-4P60372 401 aaPredicted RBP2.46□□□□□ -2.02
GTDC1-207ENST00000409298 CRCT1Q9UGL9 99 aa2.46□□□□□ -2.02
GTDC1-207ENST00000409298 KRTAP5-11Q6L8G4 156 aa2.45□□□□□ -2.02
GTDC1-207ENST00000409298 MUC2Q02817 5179 aa2.42□□□□□ -2.02
GTDC1-207ENST00000409298 SMR3BP02814 79 aaPredicted RBP2.4□□□□□ -2.03
GTDC1-207ENST00000409298 LCE3AQ5TA76 89 aa2.4□□□□□ -2.03
GTDC1-207ENST00000409298 KRTAP10-12P60413 245 aa2.38□□□□□ -2.03
GTDC1-207ENST00000409298 LRP2P98164 4655 aa2.36□□□□□ -2.03
GTDC1-207ENST00000409298 KRTAP8-1Q8IUC2 63 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms