RNA–Protein interactions for RNA: ENST00000409198.5

NEB-204, Transcript of nebulin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene NEB, Length 20,637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-204ENST00000409198 RYR1P21817 5038 aa1.62□□□□□ -2.15
NEB-204ENST00000409198 HECTD4Q9Y4D8 3996 aa1.61□□□□□ -2.15
NEB-204ENST00000409198 LORP23490 312 aaPredicted RBP1.6□□□□□ -2.15
NEB-204ENST00000409198 KRTAP10-12P60413 245 aa1.59□□□□□ -2.15
NEB-204ENST00000409198 RYR3Q15413 4870 aa1.58□□□□□ -2.16
NEB-204ENST00000409198 CSMD3Q7Z407 3707 aa1.58□□□□□ -2.16
NEB-204ENST00000409198 DYNC2H1Q8NCM8 4307 aaKnown RBP1.57□□□□□ -2.16
NEB-204ENST00000409198 DNAH11Q96DT5 4516 aa1.57□□□□□ -2.16
NEB-204ENST00000409198 KRTAP8-1Q8IUC2 63 aa1.56□□□□□ -2.16
NEB-204ENST00000409198 KRTAP10-7P60409 375 aaPredicted RBP1.56□□□□□ -2.16
NEB-204ENST00000409198 PLECQ15149 4684 aaKnown RBP1.56□□□□□ -2.16
NEB-204ENST00000409198 KRTAP12-1P59990 96 aa1.56□□□□□ -2.16
NEB-204ENST00000409198 MYCBP2O75592 4640 aa1.56□□□□□ -2.16
NEB-204ENST00000409198 KRTAP10-5P60370 271 aa1.55□□□□□ -2.16
NEB-204ENST00000409198 FRAS1Q86XX4 4008 aa1.55□□□□□ -2.16
NEB-204ENST00000409198 RYR2Q92736 4967 aa1.55□□□□□ -2.16
NEB-204ENST00000409198 ANK3Q12955 4377 aaKnown RBP1.55□□□□□ -2.16
NEB-204ENST00000409198 KRTAP3-1Q9BYR8 98 aa1.55□□□□□ -2.16
NEB-204ENST00000409198 DYNC1H1Q14204 4646 aaKnown RBP1.55□□□□□ -2.16
NEB-204ENST00000409198 DNAH2Q9P225 4427 aa1.55□□□□□ -2.16
NEB-204ENST00000409198 BIRC6Q9NR09 4857 aa1.54□□□□□ -2.16
NEB-204ENST00000409198 PKHD1P08F94 4074 aa1.53□□□□□ -2.16
NEB-204ENST00000409198 VPS13BQ7Z7G8 4022 aa1.53□□□□□ -2.16
NEB-204ENST00000409198 VPS13DQ5THJ4 4388 aa1.52□□□□□ -2.17
NEB-204ENST00000409198 KMT2AQ03164 3969 aa1.52□□□□□ -2.17
NEB-204ENST00000409198 KRTAP12-3P60328 96 aa1.51□□□□□ -2.17
NEB-204ENST00000409198 DNHD1Q96M86 4753 aa1.51□□□□□ -2.17
NEB-204ENST00000409198 KMT2CQ8NEZ4 4911 aaKnown RBP1.5□□□□□ -2.17
NEB-204ENST00000409198 DNAH5Q8TE73 4624 aa1.5□□□□□ -2.17
NEB-204ENST00000409198 KRTAP23-1A1A580 65 aa1.48□□□□□ -2.17
NEB-204ENST00000409198 KRTAP3-2Q9BYR7 98 aa1.48□□□□□ -2.17
NEB-204ENST00000409198 HERC1Q15751 4861 aa1.47□□□□□ -2.17
NEB-204ENST00000409198 SPRR2FQ96RM1 72 aa1.46□□□□□ -2.18
NEB-204ENST00000409198 PCLOQ9Y6V0 5065 aa1.46□□□□□ -2.18
NEB-204ENST00000409198 SPRR2EP22531 72 aa1.46□□□□□ -2.18
NEB-204ENST00000409198 SPRR2BP35325 72 aa1.46□□□□□ -2.18
NEB-204ENST00000409198 SPRR2AP35326 72 aa1.46□□□□□ -2.18
NEB-204ENST00000409198 DNAH8Q96JB1 4490 aa1.45□□□□□ -2.18
NEB-204ENST00000409198 STARD9Q9P2P6 4700 aa1.45□□□□□ -2.18
NEB-204ENST00000409198 SACSQ9NZJ4 4579 aa1.44□□□□□ -2.18
NEB-204ENST00000409198 KRTAP4-5Q9BYR2 181 aa1.44□□□□□ -2.18
NEB-204ENST00000409198 DNAH9Q9NYC9 4486 aa1.44□□□□□ -2.18
NEB-204ENST00000409198 HERC2O95714 4834 aa1.44□□□□□ -2.18
NEB-204ENST00000409198 SPRR2DP22532 72 aa1.44□□□□□ -2.18
NEB-204ENST00000409198 DNAH17Q9UFH2 4485 aa1.43□□□□□ -2.18
NEB-204ENST00000409198 LCE3AQ5TA76 89 aa1.43□□□□□ -2.18
NEB-204ENST00000409198 FAT1Q14517 4588 aa1.42□□□□□ -2.18
NEB-204ENST00000409198 KRTAP3-3Q9BYR6 98 aa1.41□□□□□ -2.18
NEB-204ENST00000409198 APOBP04114 4563 aaKnown RBP1.41□□□□□ -2.18
NEB-204ENST00000409198 FAT2Q9NYQ8 4349 aa1.4□□□□□ -2.19
NEB-204ENST00000409198 LRP1BQ9NZR2 4599 aa1.4□□□□□ -2.19
NEB-204ENST00000409198 HSPG2P98160 4391 aa1.39□□□□□ -2.19
NEB-204ENST00000409198 KIAA1109Q2LD37 5005 aa1.39□□□□□ -2.19
NEB-204ENST00000409198 MT1HL1P0DM35 61 aa1.39□□□□□ -2.19
NEB-204ENST00000409198 SPRR5A0A1B0GTR4 108 aa1.38□□□□□ -2.19
NEB-204ENST00000409198 LCE2BO14633 110 aa1.38□□□□□ -2.19
NEB-204ENST00000409198 GPR98Q8WXG9 6306 aa1.38□□□□□ -2.19
NEB-204ENST00000409198 RNF213Q63HN8 5207 aa1.37□□□□□ -2.19
NEB-204ENST00000409198 KRTAP19-4Q3LI73 84 aa1.37□□□□□ -2.19
NEB-204ENST00000409198 KRTAP12-4P60329 112 aa1.37□□□□□ -2.19
NEB-204ENST00000409198 KRTAP10-4P60372 401 aaPredicted RBP1.36□□□□□ -2.19
NEB-204ENST00000409198 ABCA13Q86UQ4 5058 aa1.36□□□□□ -2.19
NEB-204ENST00000409198 TNXBP22105 4242 aa1.35□□□□□ -2.19
NEB-204ENST00000409198 FLGP20930 4061 aaPredicted RBP1.35□□□□□ -2.19
NEB-204ENST00000409198 HMCN2Q8NDA2 5059 aa1.34□□□□□ -2.19
NEB-204ENST00000409198 MT1HP80294 61 aa1.34□□□□□ -2.19
NEB-204ENST00000409198 HYDINQ4G0P3 5121 aa1.34□□□□□ -2.19
NEB-204ENST00000409198 PKD1P98161 4303 aa1.34□□□□□ -2.2
NEB-204ENST00000409198 FAT3Q8TDW7 4589 aa1.34□□□□□ -2.2
NEB-204ENST00000409198 LCE2CQ5TA81 110 aa1.32□□□□□ -2.2
NEB-204ENST00000409198 EPPK1P58107 5090 aaKnown RBP1.31□□□□□ -2.2
NEB-204ENST00000409198 FAT4Q6V0I7 4981 aa1.31□□□□□ -2.2
NEB-204ENST00000409198 KRTAP9-6A0A140TA67 174 aa1.3□□□□□ -2.2
NEB-204ENST00000409198 LCE2DQ5TA82 110 aaPredicted RBP1.3□□□□□ -2.2
NEB-204ENST00000409198 KRTAP9-2Q9BYQ4 174 aa1.3□□□□□ -2.2
NEB-204ENST00000409198 KRTAP17-1Q9BYP8 105 aa1.29□□□□□ -2.2
NEB-204ENST00000409198 KRTAP19-5Q3LI72 72 aa1.29□□□□□ -2.2
NEB-204ENST00000409198 KRTAP20-1Q3LI63 56 aa1.28□□□□□ -2.2
NEB-204ENST00000409198 LRP2P98164 4655 aa1.28□□□□□ -2.21
NEB-204ENST00000409198 NEBP20929 6669 aa1.27□□□□□ -2.21
NEB-204ENST00000409198 KRTAP4-1Q9BYQ7 146 aa1.27□□□□□ -2.21
NEB-204ENST00000409198 LCE3CQ5T5A8 94 aa1.26□□□□□ -2.21
NEB-204ENST00000409198 UBR4Q5T4S7 5183 aa1.26□□□□□ -2.21
NEB-204ENST00000409198 LRP1Q07954 4544 aaKnown RBP1.25□□□□□ -2.21
NEB-204ENST00000409198 LCE3BQ5TA77 95 aa1.25□□□□□ -2.21
NEB-204ENST00000409198 MT2AP02795 61 aa1.24□□□□□ -2.21
NEB-204ENST00000409198 MUC17Q685J3 4493 aa1.24□□□□□ -2.21
NEB-204ENST00000409198 SPRR2GQ9BYE4 73 aa1.22□□□□□ -2.21
NEB-204ENST00000409198 MT4P47944 62 aa1.22□□□□□ -2.21
NEB-204ENST00000409198 SYNE2Q8WXH0 6885 aaKnown RBP1.22□□□□□ -2.21
NEB-204ENST00000409198 KRTAP19-1Q8IUB9 90 aa1.21□□□□□ -2.22
NEB-204ENST00000409198 LCE3DQ9BYE3 92 aa1.21□□□□□ -2.22
NEB-204ENST00000409198 MT1GP13640 62 aa1.2□□□□□ -2.22
NEB-204ENST00000409198 KRTAP9-7A8MTY7 169 aa1.2□□□□□ -2.22
NEB-204ENST00000409198 LCE3EQ5T5B0 92 aa1.19□□□□□ -2.22
NEB-204ENST00000409198 MT1FP04733 61 aa1.19□□□□□ -2.22
NEB-204ENST00000409198 LCE1BQ5T7P3 118 aa1.17□□□□□ -2.22
NEB-204ENST00000409198 MT3P25713 68 aa1.16□□□□□ -2.22
NEB-204ENST00000409198 FSIP2Q5CZC0 6907 aa1.16□□□□□ -2.22
NEB-204ENST00000409198 MUC12Q9UKN1 5478 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms