RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 COX6B2Q6YFQ2 88 aa7.96□□□□□ -1.14
ATG4B-206ENST00000405546 Q5VSD8 79 aa7.95□□□□□ -1.14
ATG4B-206ENST00000405546 APOBP04114 4563 aaKnown RBP7.95□□□□□ -1.14
ATG4B-206ENST00000405546 LRP1Q07954 4544 aaKnown RBP7.95□□□□□ -1.14
ATG4B-206ENST00000405546 MYCBP2O75592 4640 aa7.91□□□□□ -1.14
ATG4B-206ENST00000405546 TPRXLQ17RH7 258 aa7.84□□□□□ -1.15
ATG4B-206ENST00000405546 NDUFAF8A1L188 74 aa7.83□□□□□ -1.16
ATG4B-206ENST00000405546 RYR2Q92736 4967 aa7.82□□□□□ -1.16
ATG4B-206ENST00000405546 KRTAP13-4Q3LI77 160 aa7.82□□□□□ -1.16
ATG4B-206ENST00000405546 KRTAP10-8P60410 259 aa7.77□□□□□ -1.17
ATG4B-206ENST00000405546 RPL37P61927 97 aaKnown RBP7.76□□□□□ -1.17
ATG4B-206ENST00000405546 XP32Q5T750 250 aa7.74□□□□□ -1.17
ATG4B-206ENST00000405546 PKHD1L1Q86WI1 4243 aa7.72□□□□□ -1.17
ATG4B-206ENST00000405546 KIAA1109Q2LD37 5005 aa7.71□□□□□ -1.18
ATG4B-206ENST00000405546 FAT3Q8TDW7 4589 aa7.68□□□□□ -1.18
ATG4B-206ENST00000405546 S4R3F8 94 aa7.68□□□□□ -1.18
ATG4B-206ENST00000405546 KRTAP10-6P60371 365 aaPredicted RBP7.67□□□□□ -1.18
ATG4B-206ENST00000405546 HSPG2P98160 4391 aa7.67□□□□□ -1.18
ATG4B-206ENST00000405546 RYR3Q15413 4870 aa7.65□□□□□ -1.18
ATG4B-206ENST00000405546 KRTAP17-1Q9BYP8 105 aa7.63□□□□□ -1.19
ATG4B-206ENST00000405546 KRTAP12-2P59991 146 aa7.59□□□□□ -1.19
ATG4B-206ENST00000405546 KRTAP3-3Q9BYR6 98 aa7.58□□□□□ -1.2
ATG4B-206ENST00000405546 TNXBP22105 4242 aa7.57□□□□□ -1.2
ATG4B-206ENST00000405546 KRTAP3-2Q9BYR7 98 aa7.56□□□□□ -1.2
ATG4B-206ENST00000405546 RYR1P21817 5038 aa7.55□□□□□ -1.2
ATG4B-206ENST00000405546 MT1HL1P0DM35 61 aa7.54□□□□□ -1.2
ATG4B-206ENST00000405546 KRTAP15-1Q3LI76 137 aa7.53□□□□□ -1.2
ATG4B-206ENST00000405546 LRP2P98164 4655 aa7.51□□□□□ -1.21
ATG4B-206ENST00000405546 LPAP08519 4548 aa7.45□□□□□ -1.22
ATG4B-206ENST00000405546 KRTAP4-5Q9BYR2 181 aa7.41□□□□□ -1.22
ATG4B-206ENST00000405546 KRTAP12-1P59990 96 aa7.4□□□□□ -1.23
ATG4B-206ENST00000405546 EPPK1P58107 5090 aaKnown RBP7.39□□□□□ -1.23
ATG4B-206ENST00000405546 J3QL48 77 aa7.39□□□□□ -1.23
ATG4B-206ENST00000405546 ABCA13Q86UQ4 5058 aa7.31□□□□□ -1.24
ATG4B-206ENST00000405546 M0QZ58 72 aa7.27□□□□□ -1.25
ATG4B-206ENST00000405546 R4GN34 69 aa7.25□□□□□ -1.25
ATG4B-206ENST00000405546 SEC61BP60468 96 aaKnown RBP7.24□□□□□ -1.25
ATG4B-206ENST00000405546 A0A0A0MQY5 61 aa7.23□□□□□ -1.25
ATG4B-206ENST00000405546 PLAC4Q8WY50 150 aa7.11□□□□□ -1.27
ATG4B-206ENST00000405546 LUZP6Q538Z0 58 aa7.1□□□□□ -1.27
ATG4B-206ENST00000405546 HERC2O95714 4834 aa7.08□□□□□ -1.28
ATG4B-206ENST00000405546 KRTAP4-1Q9BYQ7 146 aa7.07□□□□□ -1.28
ATG4B-206ENST00000405546 MUC2Q02817 5179 aa7.06□□□□□ -1.28
ATG4B-206ENST00000405546 LORP23490 312 aaPredicted RBP7.04□□□□□ -1.28
ATG4B-206ENST00000405546 CAMK2N1Q7Z7J9 78 aa6.97□□□□□ -1.29
ATG4B-206ENST00000405546 BIRC6Q9NR09 4857 aa6.92□□□□□ -1.3
ATG4B-206ENST00000405546 MUC17Q685J3 4493 aa6.85□□□□□ -1.31
ATG4B-206ENST00000405546 HERC1Q15751 4861 aa6.82□□□□□ -1.32
ATG4B-206ENST00000405546 M0R2T5 61 aa6.78□□□□□ -1.32
ATG4B-206ENST00000405546 FAT4Q6V0I7 4981 aa6.7□□□□□ -1.34
ATG4B-206ENST00000405546 KRTAP19-2Q3LHN2 52 aa6.69□□□□□ -1.34
ATG4B-206ENST00000405546 PCLOQ9Y6V0 5065 aa6.63□□□□□ -1.35
ATG4B-206ENST00000405546 RNF213Q63HN8 5207 aa6.62□□□□□ -1.35
ATG4B-206ENST00000405546 FLGP20930 4061 aaPredicted RBP6.59□□□□□ -1.36
ATG4B-206ENST00000405546 PP632Q6XCG6 107 aa6.54□□□□□ -1.36
ATG4B-206ENST00000405546 TNP1P09430 55 aa6.54□□□□□ -1.36
ATG4B-206ENST00000405546 HMCN2Q8NDA2 5059 aa6.5□□□□□ -1.37
ATG4B-206ENST00000405546 KRTAP10-10P60014 251 aa6.47□□□□□ -1.37
ATG4B-206ENST00000405546 UBR4Q5T4S7 5183 aa6.45□□□□□ -1.38
ATG4B-206ENST00000405546 LCE2CQ5TA81 110 aa6.4□□□□□ -1.38
ATG4B-206ENST00000405546 MT1HP80294 61 aa6.33□□□□□ -1.4
ATG4B-206ENST00000405546 KRTAP19-1Q8IUB9 90 aa6.3□□□□□ -1.4
ATG4B-206ENST00000405546 SPRR2GQ9BYE4 73 aa6.26□□□□□ -1.41
ATG4B-206ENST00000405546 MT1FP04733 61 aa6.26□□□□□ -1.41
ATG4B-206ENST00000405546 MT2AP02795 61 aa6.23□□□□□ -1.41
ATG4B-206ENST00000405546 SPRR5A0A1B0GTR4 108 aa6.22□□□□□ -1.41
ATG4B-206ENST00000405546 LCE3AQ5TA76 89 aa6.2□□□□□ -1.42
ATG4B-206ENST00000405546 KRTAP9-8Q9BYQ0 159 aa6.13□□□□□ -1.43
ATG4B-206ENST00000405546 KRTAP23-1A1A580 65 aa6.06□□□□□ -1.44
ATG4B-206ENST00000405546 PRO2289Q9P1D8 64 aa6.04□□□□□ -1.44
ATG4B-206ENST00000405546 MT1BP07438 61 aa5.96□□□□□ -1.45
ATG4B-206ENST00000405546 KRTAP19-8Q3LI54 63 aa5.94□□□□□ -1.46
ATG4B-206ENST00000405546 KRTAP10-5P60370 271 aa5.93□□□□□ -1.46
ATG4B-206ENST00000405546 MT1XP80297 61 aa5.93□□□□□ -1.46
ATG4B-206ENST00000405546 KRTAP10-12P60413 245 aa5.92□□□□□ -1.46
ATG4B-206ENST00000405546 USH2AO75445 5202 aa5.9□□□□□ -1.46
ATG4B-206ENST00000405546 KRTAP12-3P60328 96 aa5.87□□□□□ -1.47
ATG4B-206ENST00000405546 KRTAP10-7P60409 375 aaPredicted RBP5.86□□□□□ -1.47
ATG4B-206ENST00000405546 KRTAP9-3Q9BYQ3 159 aa5.86□□□□□ -1.47
ATG4B-206ENST00000405546 KRTAP8-1Q8IUC2 63 aa5.82□□□□□ -1.48
ATG4B-206ENST00000405546 KMT2DO14686 5537 aa5.82□□□□□ -1.48
ATG4B-206ENST00000405546 INE1O15225 51 aa5.8□□□□□ -1.48
ATG4B-206ENST00000405546 LCE2BO14633 110 aa5.7□□□□□ -1.5
ATG4B-206ENST00000405546 FSIP2Q5CZC0 6907 aa5.69□□□□□ -1.5
ATG4B-206ENST00000405546 KRTAP19-5Q3LI72 72 aa5.63□□□□□ -1.51
ATG4B-206ENST00000405546 KRTAP4-8A0A0G2JLE6 195 aa5.61□□□□□ -1.51
ATG4B-206ENST00000405546 KRTAP4-8Q9BYQ9 185 aa5.61□□□□□ -1.51
ATG4B-206ENST00000405546 LCE2AQ5TA79 106 aaPredicted RBP5.48□□□□□ -1.53
ATG4B-206ENST00000405546 LCE3CQ5T5A8 94 aa5.44□□□□□ -1.54
ATG4B-206ENST00000405546 KRTAP4-7Q9BYR0 210 aa5.43□□□□□ -1.54
ATG4B-206ENST00000405546 KRTAP9-6A8MVA2 160 aa5.41□□□□□ -1.54
ATG4B-206ENST00000405546 KRTAP19-7Q3SYF9 63 aa5.26□□□□□ -1.57
ATG4B-206ENST00000405546 SSPOA2VEC9 5147 aa5.26□□□□□ -1.57
ATG4B-206ENST00000405546 DSTQ03001 7570 aaKnown RBP5.14□□□□□ -1.59
ATG4B-206ENST00000405546 CRCT1Q9UGL9 99 aa5.14□□□□□ -1.59
ATG4B-206ENST00000405546 MT1EP04732 61 aa5.13□□□□□ -1.59
ATG4B-206ENST00000405546 MT1LQ93083 61 aa5.13□□□□□ -1.59
ATG4B-206ENST00000405546 MUC12Q9UKN1 5478 aa5.11□□□□□ -1.59
ATG4B-206ENST00000405546 KRTAP2-3P0C7H8 128 aa5.08□□□□□ -1.6
ATG4B-206ENST00000405546 KRTAP2-4Q9BYR9 128 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms