RNA–Protein interactions for RNA: ENST00000405402.6

GSE1-203, Transcript of Gse1 coiled-coil protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSE1, Length 4,366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-203ENST00000405402 VPS13DQ5THJ4 4388 aa6.73□□□□□ -1.33
GSE1-203ENST00000405402 KRTAP10-4P60372 401 aaPredicted RBP6.71□□□□□ -1.33
GSE1-203ENST00000405402 KRTAP4-5Q9BYR2 181 aa6.71□□□□□ -1.34
GSE1-203ENST00000405402 DNAH7Q8WXX0 4024 aa6.71□□□□□ -1.34
GSE1-203ENST00000405402 KIAA1109Q2LD37 5005 aa6.7□□□□□ -1.34
GSE1-203ENST00000405402 A0A0A0MQY5 61 aa6.68□□□□□ -1.34
GSE1-203ENST00000405402 DNAH3Q8TD57 4116 aa6.68□□□□□ -1.34
GSE1-203ENST00000405402 DYNC1H1Q14204 4646 aaKnown RBP6.66□□□□□ -1.34
GSE1-203ENST00000405402 KRTAP12-1P59990 96 aa6.66□□□□□ -1.34
GSE1-203ENST00000405402 HYDINQ4G0P3 5121 aa6.64□□□□□ -1.35
GSE1-203ENST00000405402 TNP1P09430 55 aa6.64□□□□□ -1.35
GSE1-203ENST00000405402 DNAH17Q9UFH2 4485 aa6.63□□□□□ -1.35
GSE1-203ENST00000405402 KRTAP3-3Q9BYR6 98 aa6.63□□□□□ -1.35
GSE1-203ENST00000405402 FRAS1Q86XX4 4008 aa6.63□□□□□ -1.35
GSE1-203ENST00000405402 MYCBP2O75592 4640 aa6.63□□□□□ -1.35
GSE1-203ENST00000405402 MT1HL1P0DM35 61 aa6.62□□□□□ -1.35
GSE1-203ENST00000405402 DNAH2Q9P225 4427 aa6.62□□□□□ -1.35
GSE1-203ENST00000405402 RYR1P21817 5038 aa6.61□□□□□ -1.35
GSE1-203ENST00000405402 KMT2CQ8NEZ4 4911 aaKnown RBP6.6□□□□□ -1.35
GSE1-203ENST00000405402 RYR3Q15413 4870 aa6.58□□□□□ -1.36
GSE1-203ENST00000405402 KRTAP3-2Q9BYR7 98 aa6.57□□□□□ -1.36
GSE1-203ENST00000405402 DNAH6Q9C0G6 4158 aa6.55□□□□□ -1.36
GSE1-203ENST00000405402 SACSQ9NZJ4 4579 aa6.53□□□□□ -1.36
GSE1-203ENST00000405402 DYNC2H1Q8NCM8 4307 aaKnown RBP6.51□□□□□ -1.37
GSE1-203ENST00000405402 ALMS1Q8TCU4 4167 aa6.5□□□□□ -1.37
GSE1-203ENST00000405402 VPS13BQ7Z7G8 4022 aa6.49□□□□□ -1.37
GSE1-203ENST00000405402 KRTAP10-10P60014 251 aa6.49□□□□□ -1.37
GSE1-203ENST00000405402 PKHD1P08F94 4074 aa6.49□□□□□ -1.37
GSE1-203ENST00000405402 FAT3Q8TDW7 4589 aa6.44□□□□□ -1.38
GSE1-203ENST00000405402 LRP1Q07954 4544 aaKnown RBP6.43□□□□□ -1.38
GSE1-203ENST00000405402 APOBP04114 4563 aaKnown RBP6.42□□□□□ -1.38
GSE1-203ENST00000405402 RYR2Q92736 4967 aa6.41□□□□□ -1.38
GSE1-203ENST00000405402 PP632Q6XCG6 107 aa6.41□□□□□ -1.38
GSE1-203ENST00000405402 HECTD4Q9Y4D8 3996 aa6.39□□□□□ -1.39
GSE1-203ENST00000405402 KRTAP17-1Q9BYP8 105 aa6.33□□□□□ -1.4
GSE1-203ENST00000405402 FAT2Q9NYQ8 4349 aa6.33□□□□□ -1.4
GSE1-203ENST00000405402 LORP23490 312 aaPredicted RBP6.31□□□□□ -1.4
GSE1-203ENST00000405402 EPPK1P58107 5090 aaKnown RBP6.25□□□□□ -1.41
GSE1-203ENST00000405402 HERC2O95714 4834 aa6.24□□□□□ -1.41
GSE1-203ENST00000405402 KRTAP4-1Q9BYQ7 146 aa6.14□□□□□ -1.43
GSE1-203ENST00000405402 KRTAP15-1Q3LI76 137 aa6.13□□□□□ -1.43
GSE1-203ENST00000405402 LRP2P98164 4655 aa6.11□□□□□ -1.43
GSE1-203ENST00000405402 PKD1P98161 4303 aa6.09□□□□□ -1.43
GSE1-203ENST00000405402 HSPG2P98160 4391 aa6.09□□□□□ -1.43
GSE1-203ENST00000405402 BIRC6Q9NR09 4857 aa6□□□□□ -1.45
GSE1-203ENST00000405402 ABCA13Q86UQ4 5058 aa6□□□□□ -1.45
GSE1-203ENST00000405402 PRO2289Q9P1D8 64 aa5.98□□□□□ -1.45
GSE1-203ENST00000405402 LPAP08519 4548 aa5.92□□□□□ -1.46
GSE1-203ENST00000405402 PCLOQ9Y6V0 5065 aa5.9□□□□□ -1.46
GSE1-203ENST00000405402 HERC1Q15751 4861 aa5.86□□□□□ -1.47
GSE1-203ENST00000405402 LCE3AQ5TA76 89 aa5.79□□□□□ -1.48
GSE1-203ENST00000405402 RNF213Q63HN8 5207 aa5.76□□□□□ -1.49
GSE1-203ENST00000405402 KRTAP10-12P60413 245 aa5.73□□□□□ -1.49
GSE1-203ENST00000405402 MUC2Q02817 5179 aa5.72□□□□□ -1.49
GSE1-203ENST00000405402 PKHD1L1Q86WI1 4243 aa5.71□□□□□ -1.5
GSE1-203ENST00000405402 UBR4Q5T4S7 5183 aa5.67□□□□□ -1.5
GSE1-203ENST00000405402 KRTAP12-3P60328 96 aa5.66□□□□□ -1.5
GSE1-203ENST00000405402 MT1HP80294 61 aa5.64□□□□□ -1.51
GSE1-203ENST00000405402 TNXBP22105 4242 aa5.63□□□□□ -1.51
GSE1-203ENST00000405402 MT2AP02795 61 aa5.6□□□□□ -1.51
GSE1-203ENST00000405402 FSIP2Q5CZC0 6907 aa5.59□□□□□ -1.51
GSE1-203ENST00000405402 MT1FP04733 61 aa5.58□□□□□ -1.52
GSE1-203ENST00000405402 FAT4Q6V0I7 4981 aa5.55□□□□□ -1.52
GSE1-203ENST00000405402 SPRR2GQ9BYE4 73 aa5.52□□□□□ -1.53
GSE1-203ENST00000405402 KRTAP23-1A1A580 65 aa5.49□□□□□ -1.53
GSE1-203ENST00000405402 CRCT1Q9UGL9 99 aa5.49□□□□□ -1.53
GSE1-203ENST00000405402 KRTAP19-1Q8IUB9 90 aa5.46□□□□□ -1.54
GSE1-203ENST00000405402 HMCN2Q8NDA2 5059 aa5.39□□□□□ -1.55
GSE1-203ENST00000405402 LCE2CQ5TA81 110 aa5.33□□□□□ -1.56
GSE1-203ENST00000405402 MUC17Q685J3 4493 aa5.3□□□□□ -1.56
GSE1-203ENST00000405402 KRTAP19-2Q3LHN2 52 aa5.3□□□□□ -1.56
GSE1-203ENST00000405402 INE1O15225 51 aa5.29□□□□□ -1.56
GSE1-203ENST00000405402 KRTAP10-7P60409 375 aaPredicted RBP5.27□□□□□ -1.57
GSE1-203ENST00000405402 KRTAP8-1Q8IUC2 63 aa5.24□□□□□ -1.57
GSE1-203ENST00000405402 KRTAP9-8Q9BYQ0 159 aa5.24□□□□□ -1.57
GSE1-203ENST00000405402 KRTAP19-5Q3LI72 72 aa5.23□□□□□ -1.57
GSE1-203ENST00000405402 FLGP20930 4061 aaPredicted RBP5.2□□□□□ -1.58
GSE1-203ENST00000405402 MT1XP80297 61 aa5.19□□□□□ -1.58
GSE1-203ENST00000405402 MT1BP07438 61 aa5.19□□□□□ -1.58
GSE1-203ENST00000405402 KRTAP10-5P60370 271 aa5.16□□□□□ -1.58
GSE1-203ENST00000405402 KRTAP19-8Q3LI54 63 aa5.16□□□□□ -1.58
GSE1-203ENST00000405402 KRTAP4-8A0A0G2JLE6 195 aa5.11□□□□□ -1.59
GSE1-203ENST00000405402 KRTAP4-8Q9BYQ9 185 aa5.11□□□□□ -1.59
GSE1-203ENST00000405402 LCE3CQ5T5A8 94 aa5.05□□□□□ -1.6
GSE1-203ENST00000405402 KRTAP9-3Q9BYQ3 159 aa5.03□□□□□ -1.6
GSE1-203ENST00000405402 USH2AO75445 5202 aa5□□□□□ -1.61
GSE1-203ENST00000405402 SPRR5A0A1B0GTR4 108 aa4.97□□□□□ -1.61
GSE1-203ENST00000405402 OBSCNQ5VST9 7968 aa4.94□□□□□ -1.62
GSE1-203ENST00000405402 LCE2BO14633 110 aa4.93□□□□□ -1.62
GSE1-203ENST00000405402 KRTAP4-7Q9BYR0 210 aa4.9□□□□□ -1.63
GSE1-203ENST00000405402 SYNE1Q8NF91 8797 aaKnown RBP4.87□□□□□ -1.63
GSE1-203ENST00000405402 SPRR2FQ96RM1 72 aa4.87□□□□□ -1.63
GSE1-203ENST00000405402 LCE2AQ5TA79 106 aaPredicted RBP4.79□□□□□ -1.64
GSE1-203ENST00000405402 MT1GP13640 62 aa4.75□□□□□ -1.65
GSE1-203ENST00000405402 KMT2DO14686 5537 aa4.74□□□□□ -1.65
GSE1-203ENST00000405402 DSTQ03001 7570 aaKnown RBP4.72□□□□□ -1.65
GSE1-203ENST00000405402 FCGBPQ9Y6R7 5405 aaPredicted RBP4.67□□□□□ -1.66
GSE1-203ENST00000405402 LCE3BQ5TA77 95 aa4.62□□□□□ -1.67
GSE1-203ENST00000405402 KRTAP9-2Q9BYQ4 174 aa4.6□□□□□ -1.67
GSE1-203ENST00000405402 MT1LQ93083 61 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms