RNA–Protein interactions for RNA: ENST00000405315.8

NUCB1-201, Transcript of nucleobindin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NUCB1, Length 2,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-201ENST00000405315 XP32Q5T750 250 aa7.53□□□□□ -1.2
NUCB1-201ENST00000405315 KRTAP3-3Q9BYR6 98 aa7.52□□□□□ -1.21
NUCB1-201ENST00000405315 KMT2CQ8NEZ4 4911 aaKnown RBP7.52□□□□□ -1.21
NUCB1-201ENST00000405315 K7ERS5 55 aa7.5□□□□□ -1.21
NUCB1-201ENST00000405315 HSPG2P98160 4391 aa7.49□□□□□ -1.21
NUCB1-201ENST00000405315 KRTAP10-6P60371 365 aaPredicted RBP7.47□□□□□ -1.21
NUCB1-201ENST00000405315 S4R3F8 94 aa7.47□□□□□ -1.21
NUCB1-201ENST00000405315 DMBT1Q9UGM3 2413 aaPredicted RBP7.46□□□□□ -1.21
NUCB1-201ENST00000405315 KRTAP25-1Q3LHN0 102 aa7.45□□□□□ -1.22
NUCB1-201ENST00000405315 ROMO1P60602 79 aa7.44□□□□□ -1.22
NUCB1-201ENST00000405315 KRTAP13-4Q3LI77 160 aa7.42□□□□□ -1.22
NUCB1-201ENST00000405315 KRTAP3-2Q9BYR7 98 aa7.42□□□□□ -1.22
NUCB1-201ENST00000405315 KRTAP17-1Q9BYP8 105 aa7.4□□□□□ -1.23
NUCB1-201ENST00000405315 A0A0D9SG42 100 aa7.38□□□□□ -1.23
NUCB1-201ENST00000405315 CRIPTQ9P021 101 aa7.38□□□□□ -1.23
NUCB1-201ENST00000405315 MT1HL1P0DM35 61 aa7.36□□□□□ -1.23
NUCB1-201ENST00000405315 MYCBP2O75592 4640 aa7.36□□□□□ -1.23
NUCB1-201ENST00000405315 P0C880 135 aa7.34□□□□□ -1.24
NUCB1-201ENST00000405315 RYR1P21817 5038 aa7.33□□□□□ -1.24
NUCB1-201ENST00000405315 RYR3Q15413 4870 aa7.25□□□□□ -1.25
NUCB1-201ENST00000405315 TPRXLQ17RH7 258 aa7.22□□□□□ -1.25
NUCB1-201ENST00000405315 KIAA1109Q2LD37 5005 aa7.21□□□□□ -1.26
NUCB1-201ENST00000405315 KRTAP12-2P59991 146 aa7.18□□□□□ -1.26
NUCB1-201ENST00000405315 LPAP08519 4548 aa7.18□□□□□ -1.26
NUCB1-201ENST00000405315 LRP2P98164 4655 aa7.14□□□□□ -1.27
NUCB1-201ENST00000405315 KRTAP12-1P59990 96 aa7.13□□□□□ -1.27
NUCB1-201ENST00000405315 SPINT4Q6UDR6 99 aa7.13□□□□□ -1.27
NUCB1-201ENST00000405315 C10orf95Q9H7T3 257 aa7.1□□□□□ -1.27
NUCB1-201ENST00000405315 M0QZ58 72 aa7.08□□□□□ -1.28
NUCB1-201ENST00000405315 EPPK1P58107 5090 aaKnown RBP7□□□□□ -1.29
NUCB1-201ENST00000405315 NDUFAF8A1L188 74 aa7□□□□□ -1.29
NUCB1-201ENST00000405315 KRTAP4-5Q9BYR2 181 aa7□□□□□ -1.29
NUCB1-201ENST00000405315 ABCA13Q86UQ4 5058 aa6.98□□□□□ -1.29
NUCB1-201ENST00000405315 BIRC6Q9NR09 4857 aa6.96□□□□□ -1.3
NUCB1-201ENST00000405315 SEC61BP60468 96 aaKnown RBP6.95□□□□□ -1.3
NUCB1-201ENST00000405315 R4GN34 69 aa6.93□□□□□ -1.3
NUCB1-201ENST00000405315 KRTAP15-1Q3LI76 137 aa6.9□□□□□ -1.31
NUCB1-201ENST00000405315 KRTAP4-1Q9BYQ7 146 aa6.87□□□□□ -1.31
NUCB1-201ENST00000405315 MUC17Q685J3 4493 aa6.86□□□□□ -1.31
NUCB1-201ENST00000405315 LORP23490 312 aaPredicted RBP6.83□□□□□ -1.32
NUCB1-201ENST00000405315 J3QL48 77 aa6.81□□□□□ -1.32
NUCB1-201ENST00000405315 KRTAP19-2Q3LHN2 52 aa6.73□□□□□ -1.33
NUCB1-201ENST00000405315 HERC2O95714 4834 aa6.72□□□□□ -1.33
NUCB1-201ENST00000405315 A0A0A0MQY5 61 aa6.64□□□□□ -1.35
NUCB1-201ENST00000405315 CAMK2N1Q7Z7J9 78 aa6.59□□□□□ -1.35
NUCB1-201ENST00000405315 PCLOQ9Y6V0 5065 aa6.56□□□□□ -1.36
NUCB1-201ENST00000405315 MUC2Q02817 5179 aa6.53□□□□□ -1.36
NUCB1-201ENST00000405315 FLGP20930 4061 aaPredicted RBP6.51□□□□□ -1.37
NUCB1-201ENST00000405315 PLAC4Q8WY50 150 aa6.5□□□□□ -1.37
NUCB1-201ENST00000405315 LUZP6Q538Z0 58 aa6.47□□□□□ -1.37
NUCB1-201ENST00000405315 PP632Q6XCG6 107 aa6.47□□□□□ -1.37
NUCB1-201ENST00000405315 HERC1Q15751 4861 aa6.37□□□□□ -1.39
NUCB1-201ENST00000405315 TNP1P09430 55 aa6.33□□□□□ -1.4
NUCB1-201ENST00000405315 LCE2CQ5TA81 110 aa6.32□□□□□ -1.4
NUCB1-201ENST00000405315 HMCN2Q8NDA2 5059 aa6.27□□□□□ -1.41
NUCB1-201ENST00000405315 SPRR2GQ9BYE4 73 aa6.23□□□□□ -1.41
NUCB1-201ENST00000405315 KRTAP23-1A1A580 65 aa6.23□□□□□ -1.41
NUCB1-201ENST00000405315 M0R2T5 61 aa6.21□□□□□ -1.42
NUCB1-201ENST00000405315 KRTAP19-1Q8IUB9 90 aa6.2□□□□□ -1.42
NUCB1-201ENST00000405315 FAT4Q6V0I7 4981 aa6.19□□□□□ -1.42
NUCB1-201ENST00000405315 MT1HP80294 61 aa6.15□□□□□ -1.42
NUCB1-201ENST00000405315 RNF213Q63HN8 5207 aa6.09□□□□□ -1.43
NUCB1-201ENST00000405315 MT1FP04733 61 aa6.08□□□□□ -1.44
NUCB1-201ENST00000405315 MT2AP02795 61 aa6.07□□□□□ -1.44
NUCB1-201ENST00000405315 KRTAP10-10P60014 251 aa6.07□□□□□ -1.44
NUCB1-201ENST00000405315 SPRR5A0A1B0GTR4 108 aa6.04□□□□□ -1.44
NUCB1-201ENST00000405315 UBR4Q5T4S7 5183 aa6.02□□□□□ -1.45
NUCB1-201ENST00000405315 LCE3AQ5TA76 89 aa6.01□□□□□ -1.45
NUCB1-201ENST00000405315 KRTAP9-8Q9BYQ0 159 aa6.01□□□□□ -1.45
NUCB1-201ENST00000405315 KRTAP19-8Q3LI54 63 aa5.95□□□□□ -1.46
NUCB1-201ENST00000405315 MT1BP07438 61 aa5.88□□□□□ -1.47
NUCB1-201ENST00000405315 KRTAP10-5P60370 271 aa5.86□□□□□ -1.47
NUCB1-201ENST00000405315 MT1XP80297 61 aa5.85□□□□□ -1.47
NUCB1-201ENST00000405315 KRTAP8-1Q8IUC2 63 aa5.83□□□□□ -1.48
NUCB1-201ENST00000405315 KRTAP10-12P60413 245 aa5.77□□□□□ -1.49
NUCB1-201ENST00000405315 KRTAP9-3Q9BYQ3 159 aa5.75□□□□□ -1.49
NUCB1-201ENST00000405315 KRTAP12-3P60328 96 aa5.71□□□□□ -1.5
NUCB1-201ENST00000405315 KRTAP10-7P60409 375 aaPredicted RBP5.7□□□□□ -1.5
NUCB1-201ENST00000405315 PRO2289Q9P1D8 64 aa5.63□□□□□ -1.51
NUCB1-201ENST00000405315 LCE2BO14633 110 aa5.52□□□□□ -1.53
NUCB1-201ENST00000405315 KRTAP19-5Q3LI72 72 aa5.47□□□□□ -1.53
NUCB1-201ENST00000405315 INE1O15225 51 aa5.44□□□□□ -1.54
NUCB1-201ENST00000405315 USH2AO75445 5202 aa5.42□□□□□ -1.54
NUCB1-201ENST00000405315 LCE2AQ5TA79 106 aaPredicted RBP5.4□□□□□ -1.54
NUCB1-201ENST00000405315 LCE3CQ5T5A8 94 aa5.37□□□□□ -1.55
NUCB1-201ENST00000405315 KRTAP4-8A0A0G2JLE6 195 aa5.33□□□□□ -1.56
NUCB1-201ENST00000405315 KRTAP4-8Q9BYQ9 185 aa5.33□□□□□ -1.56
NUCB1-201ENST00000405315 KMT2DO14686 5537 aa5.29□□□□□ -1.56
NUCB1-201ENST00000405315 KRTAP9-2Q9BYQ4 174 aa5.28□□□□□ -1.56
NUCB1-201ENST00000405315 KRTAP19-7Q3SYF9 63 aa5.2□□□□□ -1.58
NUCB1-201ENST00000405315 KRTAP9-6A8MVA2 160 aa5.19□□□□□ -1.58
NUCB1-201ENST00000405315 LCE2DQ5TA82 110 aaPredicted RBP5.13□□□□□ -1.59
NUCB1-201ENST00000405315 KRTAP4-7Q9BYR0 210 aa5.12□□□□□ -1.59
NUCB1-201ENST00000405315 KRTAP9-6A0A140TA67 174 aa5.11□□□□□ -1.59
NUCB1-201ENST00000405315 FSIP2Q5CZC0 6907 aa5.08□□□□□ -1.6
NUCB1-201ENST00000405315 MT1LQ93083 61 aa5.07□□□□□ -1.6
NUCB1-201ENST00000405315 MT1EP04732 61 aa5.06□□□□□ -1.6
NUCB1-201ENST00000405315 KRTAP19-4Q3LI73 84 aa5.03□□□□□ -1.6
NUCB1-201ENST00000405315 SSPOA2VEC9 5147 aa5.03□□□□□ -1.6
NUCB1-201ENST00000405315 KRTAP2-3P0C7H8 128 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms